The 2.0 version of rSNPBase

Variant report

Variant esv1081991
Chromosome Location chr11:3909199-3909200
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:3888600-3911200 Weak transcription Dnd41 blood
2 chr11:3889200-3913400 Weak transcription Aorta Aorta
3 chr11:3891400-3915000 Enhancers Primary B cells from peripheral blood blood
4 chr11:3899200-3926200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr11:3899800-3915600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr11:3900000-3916000 Weak transcription Spleen Spleen
7 chr11:3901200-3914600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr11:3902000-3911400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr11:3902200-3909200 Weak transcription Brain Hippocampus Middle brain
10 chr11:3902200-3909200 Weak transcription Fetal Thymus thymus
11 chr11:3902200-3909200 Weak transcription Thymus Thymus
12 chr11:3902200-3909400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr11:3902200-3914600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr11:3902200-3916400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr11:3902200-3916400 Weak transcription Stomach Smooth Muscle stomach
16 chr11:3902400-3909200 Weak transcription Left Ventricle heart
17 chr11:3902400-3910400 Enhancers Primary neutrophils fromperipheralblood blood
18 chr11:3902400-3916400 Weak transcription Fetal Intestine Small intestine
19 chr11:3902400-3923800 Weak transcription Gastric stomach
20 chr11:3905800-3911000 Weak transcription K562 blood
21 chr11:3905800-3915200 Weak transcription Esophagus oesophagus
22 chr11:3905800-3915200 Weak transcription Right Ventricle heart
23 chr11:3906000-3913000 Weak transcription Small Intestine intestine
24 chr11:3906000-3914200 Weak transcription Primary T cells from cord blood blood
25 chr11:3906000-3914600 Enhancers Primary B cells from cord blood blood
26 chr11:3906000-3915200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr11:3906000-3915200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr11:3907000-3909600 Enhancers HepG2 liver
29 chr11:3907000-3910000 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr11:3907000-3910800 Enhancers Primary T cells fromperipheralblood blood
31 chr11:3907000-3913200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr11:3907200-3909200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr11:3907200-3910200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr11:3907200-3910200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr11:3907200-3912200 Enhancers Primary T helper cells fromperipheralblood blood
36 chr11:3907200-3915600 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr11:3907400-3914600 Weak transcription Osteobl bone
38 chr11:3907400-3915400 Weak transcription Lung lung
39 chr11:3907400-3915600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr11:3907400-3923600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr11:3907600-3915400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr11:3907600-3922600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr11:3907800-3915200 Weak transcription HMEC breast
44 chr11:3908000-3910000 Enhancers Skeletal Muscle Male skeletal muscle
45 chr11:3908000-3910000 Enhancers Skeletal Muscle Female skeletal muscle
46 chr11:3908000-3910400 Enhancers Psoas Muscle Psoas
47 chr11:3908000-3912000 Enhancers Primary T helper cells PMA-I stimulated --
48 chr11:3908200-3909600 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr11:3908200-3909800 Enhancers Primary hematopoietic stem cells blood
50 chr11:3908200-3909800 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015