Variant report
| Variant | esv1118924 |
|---|---|
| Chromosome Location | chr9:73646875-73646945 |
| allele | n/a |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
Variant overlapped rSNPs/rCNVs (count:26 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | rs200868063 | chr9:73646875-73646876 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 2 | rs72340097 | chr9:73646876-73646877 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 3 | rs368919012 | chr9:73646878-73646879 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 4 | rs372414119 | chr9:73646880-73646881 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 5 | rs369754210 | chr9:73646884-73646885 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 6 | rs12552758 | chr9:73646888-73646889 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 7 | rs376714552 | chr9:73646895-73646896 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 8 | rs370856557 | chr9:73646897-73646898 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 9 | rs372856948 | chr9:73646901-73646902 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 10 | rs77731943 | chr9:73646904-73646905 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 11 | rs111853657 | chr9:73646909-73646910 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 12 | rs377461969 | chr9:73646910-73646911 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 13 | rs374671884 | chr9:73646911-73646912 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 14 | rs371152900 | chr9:73646915-73646916 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 15 | rs375322902 | chr9:73646917-73646918 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 16 | rs372224250 | chr9:73646918-73646919 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 17 | rs368361090 | chr9:73646920-73646921 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 18 | rs74494247 | chr9:73646923-73646924 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 19 | rs77443778 | chr9:73646929-73646930 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 20 | rs812671 | chr9:73646931-73646932 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 21 | rs28539888 | chr9:73646932-73646933 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 22 | rs150033376 | chr9:73646935-73646936 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 23 | rs375300563 | chr9:73646937-73646938 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 24 | rs7024585 | chr9:73646942-73646943 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 25 | rs7021303 | chr9:73646943-73646944 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
| 26 | rs12552481 | chr9:73646944-73646945 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Variant related diseases (count:57)
| Disease | PMID | Source |
|---|---|---|
| Breast cancer | 17133270 | CNVD |
| Chordoma | 18071362 | CNVD |
| Acute lymphoblastic leukemia | 22237106 | CNVD |
| Esophageal squamous carcinoma | 21637470 | CNVD |
| Chordoma | 21602918 | CNVD |
| Renal cell carcinoma | 18592004 | CNVD |
| Developmental delay | 19490664 | CNVD |
| Chronic lymphocytic leukemia | 21546498 | CNVD |
| Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
| Medulloblastoma | 21979893 | CNVD |
| microdeletion syndrome | 16199537 | CNVD |
| Ovarian cancer | 21720365 | CNVD |
| Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
| T-cell prolymphocytic leukemia | 19278963 | CNVD |
| Cancer | 20164919 | CNVD |
| Urothelial carcinoma | 21177765 | CNVD |
| Renal cell carcinoma | 21668985 | CNVD |
| Autism | 22495311 | CNVD |
| Melanoma | 18172304 | CNVD |
| Oral squamous cell carcinoma | 17134496 | CNVD |
| Acute lymphoblastic leukemia | 20435627 | CNVD |
| Cancer | 16751803 | CNVD |
| Myelofibrosis | 22110671 | CNVD |
| lymphocytic leukemia | 21291569 | CNVD |
| Leukemia | 17361228 | CNVD |
| Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
| Glioblastoma | 16823260 | CNVD |
| Leukemia | 18688285 | CNVD |
| Non-small cell lung cancer | 21044232 | CNVD |
| Brain cancer | 20823417 | CNVD |
| Acute lymphoblastic leukemia | 21390130 | CNVD |
| Astrocytoma | 17387387 | CNVD |
| Glioblastoma multiforme | 21080181 | CNVD |
| Endometrial cancer | 22040021 | CNVD |
| Breast cancer | 21264507 | CNVD |
| Renal cell carcinoma | 19461508 | CNVD |
| Neuroblastoma | 18923191 | CNVD |
| Acute lymphoblastic leukemia | 20067559 | CNVD |
| Heart disease | 21282601 | CNVD |
| Acute promyelocytic leukemia | 19109227 | CNVD |
| Lung cancer | 18438408 | CNVD |
| small cell lung cancer | 20016488 | CNVD |
| Hodgkin''s lymphoma | 17606441 | CNVD |
| Acute myeloid leukemia | 21251322 | CNVD |
| Hepatocellular carcinoma | 16750200 | CNVD |
| Acute myeloid leukemia | 20729466 | CNVD |
| Gastrointestinal stromal cancer | 16982739 | CNVD |
| Breast cancer | 17603634 | CNVD |
| Acute lymphoblastic leukemia | 21339820 | CNVD |
| Oral cancer | 21386901 | CNVD |
| Epilepsy | 22083797 | CNVD |
| Glioblastoma multiforme | 21750150 | CNVD |
| Cancer | 21183584 | CNVD |
| Bipolar disorder | 18458673 | CNVD |
| Malignant melanoma | 17260012 | CNVD |
| Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
| Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:73641600-73652600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr9:73643800-73684000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
