Variant report

Variant	esv1120438
Chromosome Location	chr6:86708754-86714806
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 85 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:85 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs375941678	chr6:86708764-86708765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs548578321	chr6:86708772-86708773	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs77151311	chr6:86708777-86708778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs370297719	chr6:86708811-86708812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs6934037	chr6:86708834-86708835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs6934038	chr6:86708836-86708837	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs574186052	chr6:86708910-86708911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs538005810	chr6:86708912-86708913	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs377041566	chr6:86708922-86708923	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs374201049	chr6:86708950-86708951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs531085109	chr6:86709012-86709013	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs552391766	chr6:86709029-86709030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs375280373	chr6:86709034-86709035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs570917929	chr6:86709043-86709044	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs534746088	chr6:86709046-86709047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs371797390	chr6:86709056-86709057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs546952942	chr6:86709061-86709062	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs368754612	chr6:86709077-86709078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs199563870	chr6:86709088-86709089	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs200781369	chr6:86709100-86709101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs62445043	chr6:86709126-86709127	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs62445044	chr6:86709165-86709166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs62445045	chr6:86709168-86709169	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs113271780	chr6:86709178-86709179	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs62445046	chr6:86709215-86709216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs62445047	chr6:86709227-86709228	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs200914051	chr6:86709245-86709246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs111706496	chr6:86709262-86709263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs112083343	chr6:86709265-86709266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs112614137	chr6:86709289-86709290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs112210358	chr6:86709326-86709327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs111798346	chr6:86709348-86709349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs112681495	chr6:86709376-86709377	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs200622676	chr6:86709388-86709389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs111849289	chr6:86709401-86709402	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs113041592	chr6:86709409-86709410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs556941144	chr6:86709439-86709440	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs578247009	chr6:86709462-86709463	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs112548199	chr6:86709481-86709482	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs111663771	chr6:86709484-86709485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs199894367	chr6:86709640-86709641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs9734392	chr6:86709646-86709647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs141627614	chr6:86709691-86709692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs202061333	chr6:86709733-86709734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs71392120	chr6:86709793-86709794	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs111479315	chr6:86709816-86709817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs200434865	chr6:86709823-86709824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs113403803	chr6:86709863-86709864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs112935237	chr6:86709885-86709886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs112263991	chr6:86709890-86709891	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
craniofacial dysmorphism	21918468	CNVD
Myelofibrosis	22110671	CNVD
Neurodevelopmental disorder	22521361	CNVD
abnormal development	18461090	CNVD
Myelodysplastic syndrome	18508791	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:86702400-86712800	Weak transcription	Ovary	ovary

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