Variant report
Variant | esv11245 |
---|---|
Chromosome Location | chr22:21461592-21519224 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1122)
- CpG islands (count:305)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21462458-21463637 | K562 | blood: | n/a | n/a |
2 | ATF3 | chr22:21505263-21505378 | K562 | blood: | n/a | chr22:21505324-21505335 chr22:21505327-21505337 chr22:21505324-21505334 chr22:21505323-21505336 chr22:21505325-21505338 chr22:21505323-21505338 chr22:21505325-21505336 chr22:21505327-21505335 chr22:21505315-21505335 chr22:21505325-21505336 chr22:21505324-21505334 chr22:21505327-21505334 chr22:21505324-21505337 chr22:21505324-21505337 |
3 | BACH1 | chr22:21462599-21463625 | K562 | blood: | n/a | n/a |
4 | BACH1 | chr22:21462948-21463323 | H1-hESC | embryonic stem cell: | n/a | n/a |
5 | BATF | chr22:21474047-21475063 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr22:21487931-21488176 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:21475097-21475299 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:21484942-21485380 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:21476106-21476356 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:21488874-21489181 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:21471783-21471995 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:21496561-21496815 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr22:21468628-21469019 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr22:21469301-21469556 | GM12878 | blood: | n/a | chr22:21469418-21469429 |
15 | BATF | chr22:21488893-21489171 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr22:21478538-21478859 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr22:21474334-21474742 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr22:21478910-21479111 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr22:21473984-21474189 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr22:21514000-21514283 | GM12878 | blood: | n/a | n/a |
21 | BCL11A | chr22:21480752-21480991 | GM12878 | blood: | n/a | n/a |
22 | BCL11A | chr22:21469187-21469804 | GM12878 | blood: | n/a | n/a |
23 | BCL11A | chr22:21485914-21486157 | GM12878 | blood: | n/a | n/a |
24 | BCL11A | chr22:21469248-21469721 | GM12878 | blood: | n/a | n/a |
25 | BCL11A | chr22:21516133-21516312 | GM12878 | blood: | n/a | n/a |
26 | BCL11A | chr22:21475091-21475377 | GM12878 | blood: | n/a | n/a |
27 | BCL11A | chr22:21496640-21496840 | GM12878 | blood: | n/a | n/a |
28 | BCL11A | chr22:21470256-21470442 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr22:21470877-21471204 | GM12878 | blood: | n/a | chr22:21471143-21471151 |
30 | BCL11A | chr22:21474695-21475023 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr22:21488906-21489207 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr22:21474019-21474638 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr22:21476172-21476346 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr22:21473957-21475002 | GM12878 | blood: | n/a | n/a |
35 | BHLHE40 | chr22:21469164-21469628 | HepG2 | liver: | n/a | n/a |
36 | BHLHE40 | chr22:21496694-21496924 | HepG2 | liver: | n/a | chr22:21496842-21496851 chr22:21496843-21496852 chr22:21496840-21496853 chr22:21496842-21496851 |
37 | BHLHE40 | chr22:21474060-21474462 | HepG2 | liver: | n/a | n/a |
38 | BHLHE40 | chr22:21494910-21495238 | HepG2 | liver: | n/a | n/a |
39 | CBX3 | chr22:21473925-21474879 | K562 | blood: | n/a | n/a |
40 | CBX3 | chr22:21496424-21497104 | K562 | blood: | n/a | n/a |
41 | CBX3 | chr22:21496504-21496981 | K562 | blood: | n/a | n/a |
42 | CBX3 | chr22:21474040-21474599 | K562 | blood: | n/a | n/a |
43 | CCNT2 | chr22:21463069-21463100 | K562 | blood: | n/a | n/a |
44 | CEBPB | chr22:21474107-21474592 | K562 | blood: | n/a | n/a |
45 | CEBPB | chr22:21492689-21492898 | HepG2 | liver: | n/a | chr22:21492730-21492741 chr22:21492729-21492742 |
46 | CEBPD | chr22:21499198-21499779 | K562 | blood: | n/a | n/a |
47 | CTCF | chr22:21473968-21474614 | A549 | lung: | n/a | chr22:21474277-21474298 chr22:21474275-21474293 chr22:21474278-21474291 chr22:21474276-21474292 |
48 | CTCF | chr22:21503620-21503770 | GM12875 | blood: | n/a | n/a |
49 | CTCF | chr22:21474203-21474522 | LNCaP | prostate: | n/a | chr22:21474277-21474298 chr22:21474275-21474293 chr22:21474278-21474291 chr22:21474276-21474292 |
50 | CTCF | chr22:21485155-21485162 | GM10248 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21480518-21480568 | HepG2 | liver: | n/a |
2 | chr22:21479855-21479905 | HPAEpiC | pulmonary alveolar: | n/a |
3 | chr22:21505345-21505395 | NHDF-neo | bronchial: | n/a |
4 | chr22:21479855-21479905 | A549 | lung: | n/a |
5 | chr22:21479855-21479905 | U87 | brain: | n/a |
6 | chr22:21505345-21505395 | ECC-1 | luminal epithelium: | n/a |
7 | chr22:21482479-21482529 | PANC-1 | pancreas: | n/a |
8 | chr22:21480518-21480568 | SK-N-MC | brain: | n/a |
9 | chr22:21480518-21480568 | LNCaP | prostate: | n/a |
10 | chr22:21480518-21480568 | NT2-D1 | testis: | n/a |
11 | chr22:21480518-21480568 | RPTEC | kidney: | n/a |
12 | chr22:21479855-21479905 | HEEpiC | esophagus: | n/a |
13 | chr22:21479855-21479905 | HL-60 | blood: | n/a |
14 | chr22:21505345-21505395 | NT2-D1 | testis: | n/a |
15 | chr22:21505676-21505726 | HL-60 | blood: | n/a |
16 | chr22:21482479-21482529 | PrEC | prostate: | n/a |
17 | chr22:21482479-21482529 | AG09309 | skin: | n/a |
18 | chr22:21505345-21505395 | HepG2 | liver: | n/a |
19 | chr22:21505676-21505726 | PrEC | prostate: | n/a |
20 | chr22:21480518-21480568 | HMEC | breast: | n/a |
21 | chr22:21479855-21479905 | LNCaP | prostate: | n/a |
22 | chr22:21505676-21505726 | PANC-1 | pancreas: | n/a |
23 | chr22:21482479-21482529 | SK-N-MC | brain: | n/a |
24 | chr22:21505676-21505726 | AoSMC | blood vessel: | n/a |
25 | chr22:21479855-21479905 | PANC-1 | pancreas: | n/a |
26 | chr22:21479855-21479905 | AG09319 | gingival: | n/a |
27 | chr22:21482479-21482529 | AoSMC | blood vessel: | n/a |
28 | chr22:21480518-21480568 | K562 | blood: | n/a |
29 | chr22:21482479-21482529 | GM12891 | blood: | n/a |
30 | chr22:21480518-21480568 | HCM | heart: | n/a |
31 | chr22:21505676-21505726 | MCF-7 | breast: | n/a |
32 | chr22:21482479-21482529 | AG04449 | skin: | fetal |
33 | chr22:21482479-21482529 | GM12892 | blood: | n/a |
34 | chr22:21505676-21505726 | NH-A | brain: | n/a |
35 | chr22:21505345-21505395 | HNPCEpiC | eye: | n/a |
36 | chr22:21479855-21479905 | AG04450 | lung: | fetal |
37 | chr22:21480518-21480568 | U87 | brain: | n/a |
38 | chr22:21482479-21482529 | NT2-D1 | testis: | n/a |
39 | chr22:21479855-21479905 | SKMC | muscle: | n/a |
40 | chr22:21479855-21479905 | AG10803 | skin: | n/a |
41 | chr22:21505676-21505726 | SK-N-SH | brain: | n/a |
42 | chr22:21482479-21482529 | NHBE | bronchial: | n/a |
43 | chr22:21482479-21482529 | Hepatocyte | liver: | n/a |
44 | chr22:21482479-21482529 | SK-N-SH_RA | brain: | n/a |
45 | chr22:21505676-21505726 | HCPEpiC | choroid plexus: | n/a |
46 | chr22:21505676-21505726 | GM19239 | blood: | n/a |
47 | chr22:21480518-21480568 | AG09319 | gingival: | n/a |
48 | chr22:21480518-21480568 | AG10803 | skin: | n/a |
49 | chr22:21479855-21479905 | GM19239 | blood: | n/a |
50 | chr22:21482479-21482529 | HepG2 | liver: | n/a |
(count:4 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21453029..21455213-chr22:21459459..21461681,2 | K562 | blood: | |
2 | chr22:21450378..21453014-chr22:21461236..21463100,2 | K562 | blood: | |
3 | chr22:21355602..21358079-chr22:21461383..21463245,2 | MCF-7 | breast: | |
4 | chr22:21356384..21358791-chr22:21460678..21463188,2 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000224688 | TF binding region |
BCRP2 | TF binding region |
ENSG00000197210 | TF binding region |
FAM230B | TF binding region |
POM121L7 | TF binding region |
ENSG00000224688 | CpG island |
BCRP2 | CpG island |
ENSG00000197210 | CpG island |
FAM230B | CpG island |
POM121L7 | CpG island |
ENSG00000230513 | chromatin interactions |
ENSG00000184436 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs566161924 | chr22:21461592-21461593 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
2 | rs5762401 | chr22:21461607-21461608 | Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
3 | rs55851001 | chr22:21461648-21461649 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
4 | rs558210071 | chr22:21461656-21461657 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
5 | rs192845202 | chr22:21461723-21461724 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
6 | rs537075539 | chr22:21461766-21461767 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
7 | rs557077374 | chr22:21461775-21461776 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
8 | rs573743837 | chr22:21461879-21461880 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
9 | rs11703357 | chr22:21461882-21461883 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
10 | rs553086148 | chr22:21461893-21461894 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
11 | rs563969802 | chr22:21461911-21461912 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
12 | rs539262897 | chr22:21461940-21461941 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
13 | rs77283135 | chr22:21461958-21461959 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
14 | rs78550870 | chr22:21461961-21461962 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
15 | rs2543399 | chr22:21461982-21461983 | Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
16 | rs545278729 | chr22:21462004-21462005 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
17 | rs564882531 | chr22:21462005-21462006 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
18 | rs533131915 | chr22:21462007-21462008 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
19 | rs543444150 | chr22:21462016-21462017 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
20 | rs2543400 | chr22:21462045-21462046 | Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
21 | rs184046001 | chr22:21462067-21462068 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
22 | rs368025368 | chr22:21462101-21462102 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
23 | rs549220773 | chr22:21462123-21462124 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
24 | rs146116883 | chr22:21462130-21462131 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
25 | rs2541928 | chr22:21462161-21462162 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
26 | rs561336433 | chr22:21462188-21462189 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
27 | rs528729126 | chr22:21462208-21462209 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
28 | rs552084716 | chr22:21462274-21462275 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
29 | rs6005669 | chr22:21462330-21462331 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
30 | rs572004335 | chr22:21462342-21462343 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
31 | rs140392 | chr22:21462353-21462354 | Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
32 | rs556969564 | chr22:21462492-21462493 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
33 | rs7284734 | chr22:21462534-21462535 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
34 | rs536300350 | chr22:21462549-21462550 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
35 | rs62238569 | chr22:21462601-21462602 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
36 | rs73166604 | chr22:21462607-21462608 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
37 | rs552833251 | chr22:21462612-21462613 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
38 | rs572991208 | chr22:21462625-21462626 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
39 | rs199634095 | chr22:21462641-21462642 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
40 | rs73166606 | chr22:21462658-21462659 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
41 | rs558412449 | chr22:21462736-21462737 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
42 | rs113416775 | chr22:21462738-21462739 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
43 | rs544119401 | chr22:21462783-21462784 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
44 | rs568757241 | chr22:21462786-21462787 | Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
45 | rs187146752 | chr22:21462811-21462812 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
46 | rs577978917 | chr22:21462816-21462817 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
47 | rs12168041 | chr22:21462817-21462818 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
48 | rs112277962 | chr22:21462826-21462827 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
49 | rs573992539 | chr22:21462883-21462884 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
50 | rs543106235 | chr22:21462896-21462897 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Schizophrenia | 20967226 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Breast cancer | 22522925 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21457400-21470400 | Weak transcription | Right Atrium | heart |
2 | chr22:21460600-21462400 | Weak transcription | A549 | lung |
3 | chr22:21460800-21461600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
4 | chr22:21461000-21461600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
5 | chr22:21461200-21463200 | Weak transcription | K562 | blood |
6 | chr22:21462400-21464000 | Enhancers | A549 | lung |
7 | chr22:21462600-21463800 | Enhancers | Hela-S3 | cervix |
8 | chr22:21462800-21463600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
9 | chr22:21463200-21463600 | Enhancers | Muscle Satellite Cultured Cells | -- |
10 | chr22:21463200-21463800 | Enhancers | K562 | blood |
11 | chr22:21483400-21483800 | Enhancers | K562 | blood |
12 | chr22:21492600-21493000 | Enhancers | HepG2 | liver |
13 | chr22:21497000-21497200 | Bivalent Enhancer | K562 | blood |
14 | chr22:21503200-21503800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |