Variant report
Variant | esv11482 |
---|---|
Chromosome Location | chr7:61971046-62633019 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3659)
- CpG islands (count:1892)
- Chromatin interactive region (count:19)
- LncRNA region (count:8)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr7:61968776-61971670 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr7:61995014-61995043 | HepG2 | liver: | n/a | n/a |
3 | ARID3A | chr7:62003077-62003278 | HepG2 | liver: | n/a | n/a |
4 | ATF1 | chr7:61995014-61995028 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr7:62071176-62071544 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr7:61990607-61990893 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr7:62008700-62008898 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr7:61974872-61975409 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr7:61980513-61980520 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr7:62021634-62022009 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr7:62546931-62547029 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr7:61972545-61973623 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr7:62004903-62005165 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr7:62330338-62330635 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr7:62039929-62040292 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr7:61968773-61971689 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr7:61982793-61983165 | K562 | blood: | n/a | n/a |
18 | ATF1 | chr7:61985965-61986420 | K562 | blood: | n/a | n/a |
19 | ATF1 | chr7:62007999-62008153 | K562 | blood: | n/a | n/a |
20 | ATF3 | chr7:62021724-62021964 | H1-hESC | embryonic stem cell: | n/a | n/a |
21 | ATF3 | chr7:61970921-61971315 | GM12878 | blood: | n/a | n/a |
22 | ATF3 | chr7:61974958-61975207 | H1-hESC | embryonic stem cell: | n/a | n/a |
23 | BACH1 | chr7:61970815-61972697 | K562 | blood: | n/a | n/a |
24 | BACH1 | chr7:62435606-62435658 | H1-hESC | embryonic stem cell: | n/a | n/a |
25 | BACH1 | chr7:62019347-62019720 | K562 | blood: | n/a | n/a |
26 | BACH1 | chr7:62031748-62032429 | K562 | blood: | n/a | n/a |
27 | BACH1 | chr7:61974873-61976628 | K562 | blood: | n/a | n/a |
28 | BACH1 | chr7:62601389-62601434 | K562 | blood: | n/a | n/a |
29 | BATF | chr7:62031502-62031772 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr7:61979864-61980699 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr7:61967092-61975284 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr7:61992386-61992911 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr7:62006433-62006657 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr7:62021723-62022000 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr7:62565070-62565257 | GM12878 | blood: | n/a | chr7:62565199-62565210 |
36 | BATF | chr7:61979969-61980638 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr7:61993846-61994144 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr7:61975296-61977251 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr7:62188677-62188824 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr7:61967090-61977266 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr7:61981447-61983115 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr7:61993825-61994127 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr7:62006432-62006711 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr7:62009661-62009940 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr7:62015078-62015365 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr7:62016953-62017229 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr7:62002963-62003344 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr7:62004355-62004614 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr7:61985948-61986390 | GM12878 | blood: | n/a | n/a |
50 | BATF | chr7:61988411-61988912 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:61974919-61974969 | Hela-S3 | cervix: | n/a |
2 | chr7:61974919-61974969 | Hela-S3 | cervix: | n/a |
3 | chr7:62528691-62528741 | AG04449 | skin: | fetal |
4 | chr7:62574200-62574250 | Hela-S3 | cervix: | n/a |
5 | chr7:62198343-62198393 | ProgFib | skin: | n/a |
6 | chr7:62198343-62198393 | BJ | skin: | n/a |
7 | chr7:61971401-61971451 | NH-A | brain: | n/a |
8 | chr7:62531318-62531368 | SK-N-SH_RA | brain: | n/a |
9 | chr7:62490514-62490564 | NB4 | blood: | n/a |
10 | chr7:62514736-62514786 | NHDF-neo | bronchial: | n/a |
11 | chr7:62514926-62514976 | H1-hESC | embryonic stem cell: | embryo |
12 | chr7:62574903-62574953 | HPAEpiC | pulmonary alveolar: | n/a |
13 | chr7:62531318-62531368 | SK-N-MC | brain: | n/a |
14 | chr7:62574479-62574529 | NT2-D1 | testis: | n/a |
15 | chr7:61974919-61974969 | HRPEpiC | eye: | n/a |
16 | chr7:62528691-62528741 | HIPEpiC | eye: | n/a |
17 | chr7:62528691-62528741 | AG09319 | gingival: | n/a |
18 | chr7:62514736-62514786 | SKMC | muscle: | n/a |
19 | chr7:62560487-62560537 | HCPEpiC | choroid plexus: | n/a |
20 | chr7:62574200-62574250 | GM12878 | blood: | n/a |
21 | chr7:62554288-62554338 | SK-N-MC | brain: | n/a |
22 | chr7:62514926-62514976 | AG09319 | gingival: | n/a |
23 | chr7:62575098-62575148 | RPTEC | kidney: | n/a |
24 | chr7:62153290-62153340 | AG04450 | lung: | fetal |
25 | chr7:62575098-62575148 | HUVEC | blood vessel: | n/a |
26 | chr7:62514477-62514527 | GM12891 | blood: | n/a |
27 | chr7:62152353-62152403 | MCF-7 | breast: | n/a |
28 | chr7:62531318-62531368 | Hela-S3 | cervix: | n/a |
29 | chr7:62575098-62575148 | MCF10A-Er-Src | breast: | n/a |
30 | chr7:61974919-61974969 | SK-N-SH | brain: | n/a |
31 | chr7:62152353-62152403 | NHBE | bronchial: | n/a |
32 | chr7:62514572-62514622 | LNCaP | prostate: | n/a |
33 | chr7:62562718-62562768 | HEK293 | kidney: | embryo |
34 | chr7:62517839-62517889 | MCF-7 | breast: | n/a |
35 | chr7:62574479-62574529 | HEEpiC | esophagus: | n/a |
36 | chr7:62514673-62514723 | PANC-1 | pancreas: | n/a |
37 | chr7:62510825-62510875 | NH-A | brain: | n/a |
38 | chr7:62153290-62153340 | BJ | skin: | n/a |
39 | chr7:62517839-62517889 | AG10803 | skin: | n/a |
40 | chr7:62528691-62528741 | SK-N-SH | brain: | n/a |
41 | chr7:62562718-62562768 | GM12878 | blood: | n/a |
42 | chr7:62574925-62574975 | T-47D | breast: | n/a |
43 | chr7:62152353-62152403 | HRPEpiC | eye: | n/a |
44 | chr7:62191825-62191875 | Hepatocyte | liver: | n/a |
45 | chr7:62541571-62541621 | SK-N-MC | brain: | n/a |
46 | chr7:62555691-62555741 | ECC-1 | luminal epithelium: | n/a |
47 | chr7:62574903-62574953 | PFSK-1 | brain: | n/a |
48 | chr7:62575098-62575148 | PANC-1 | pancreas: | n/a |
49 | chr7:62514736-62514786 | HepG2 | liver: | n/a |
50 | chr7:62514736-62514786 | MCF-7 | breast: | n/a |
(count:19 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr10:42527395..42527915-chr7:61970565..61971091,3 | MCF-7 | breast: | |
2 | chr14:29714914..29715705-chr7:61970951..61971586,2 | MCF-7 | breast: | |
3 | chr18:18518513..18519030-chr7:61979393..61979915,2 | MCF-7 | breast: | |
4 | chr17:22017005..22017989-chr7:62476147..62476710,2 | MCF-7 | breast: | |
5 | chr1:121484723..121485367-chr7:62026258..62026778,2 | MCF-7 | breast: | |
6 | chr7:62284727..62285228-chr9:30620902..30621883,2 | MCF-7 | breast: | |
7 | chr7:61552820..61553340-chr7:62284727..62285248,3 | MCF-7 | breast: | |
8 | chr7:62093615..62095373-chr7:62122563..62125212,2 | K562 | blood: | |
9 | chr7:61967856..61971070-chr8:58714316..58715816,4 | K562 | blood: | |
10 | chr5:178209012..178209534-chr7:62475815..62476717,2 | MCF-7 | breast: | |
11 | chr17:41380367..41382313-chr7:62191292..62192792,2 | MCF-7 | breast: | |
12 | chr17:41380312..41382165-chr7:62191292..62192792,2 | K562 | blood: | |
13 | chr7:62475749..62476533-chr7:100925981..100926817,2 | MCF-7 | breast: | |
14 | chr17:41398894..41400557-chr7:62191292..62192792,2 | K562 | blood: | |
15 | chr17:41399589..41402142-chr7:62189772..62191292,2 | K562 | blood: | |
16 | chr1:121483889..121484797-chr7:61974740..61975240,2 | MCF-7 | breast: | |
17 | chr7:62093615..62095373-chr7:62122563..62125212,2 | K562 | blood: | |
18 | chr11:63950861..63953375-chr7:61969464..61971091,2 | K562 | blood: | |
19 | chr14:102551841..102553604-chr7:61969473..61971085,2 | MCF-7 | breast: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-ZNF680-11 | chr7:62441009-62441326 | XLOC_006462 |
2 | lnc-ZNF680-11 | chr7:62452942-62453054 | XLOC_006462 |
3 | lnc-AC006455.1-11 | chr7:62517831-62517952 | NONHSAT120889 |
4 | lnc-ZNF680-44 | chr7:62547448-62548639 | NONHSAT120891 |
5 | lnc-AC006455.1-11 | chr7:62520310-62520462 | NONHSAT120889 |
6 | lnc-AC006455.1-12 | chr7:61971118-61971191 | NONHSAT120885 |
7 | lnc-ZNF680-10 | chr7:62505205-62505547 | XLOC_006463 |
8 | lnc-ZNF680-10 | chr7:62514734-62514809 | XLOC_006463 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000234312 | TF binding region |
ENSG00000231523 | TF binding region |
ZNF90P3 | TF binding region |
ENSG00000265865 | TF binding region |
ENSG00000227148 | TF binding region |
RNU6-417P | TF binding region |
ENSG00000233454 | TF binding region |
ENSG00000234312 | CpG island |
ENSG00000231523 | CpG island |
ZNF90P3 | CpG island |
ENSG00000265865 | CpG island |
ENSG00000227148 | CpG island |
RNU6-417P | CpG island |
ENSG00000233454 | CpG island |
ENSG00000080824 | chromatin interactions |
ENSG00000168439 | chromatin interactions |
ENSG00000236383 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs76218356 | chr7:61971046-61971047 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
2 | rs201310586 | chr7:61971053-61971054 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
3 | rs199761229 | chr7:61971058-61971059 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
4 | rs563098708 | chr7:61971062-61971063 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
5 | rs398038005 | chr7:61971063-61971064 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
6 | rs75323257 | chr7:61971064-61971065 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
7 | rs530183000 | chr7:61971074-61971075 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
8 | rs548711299 | chr7:61971076-61971077 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
9 | rs148614558 | chr7:61971080-61971081 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
10 | rs12056152 | chr7:61971082-61971083 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
11 | rs71302010 | chr7:61971083-61971084 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
12 | rs75761614 | chr7:61971084-61971085 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
13 | rs71302011 | chr7:61971085-61971086 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
14 | rs566828145 | chr7:61971087-61971088 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs527684799 | chr7:61971091-61971092 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs552584236 | chr7:61971095-61971096 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs74198352 | chr7:61971096-61971097 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs570642462 | chr7:61971102-61971103 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs538166406 | chr7:61971108-61971109 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs200639894 | chr7:61971110-61971111 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs369634142 | chr7:61971111-61971112 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs556053883 | chr7:61971118-61971119 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
23 | rs79541488 | chr7:61971119-61971120 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
24 | rs377231869 | chr7:61971121-61971122 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
25 | rs112403551 | chr7:61971122-61971123 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
26 | rs76736645 | chr7:61971123-61971124 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
27 | rs79260385 | chr7:61971127-61971128 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
28 | rs74810076 | chr7:61971129-61971130 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
29 | rs71302009 | chr7:61971134-61971135 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
30 | rs370172399 | chr7:61971138-61971139 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
31 | rs567927555 | chr7:61971140-61971141 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
32 | rs62455168 | chr7:61971143-61971144 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
33 | rs111331284 | chr7:61971151-61971152 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
34 | rs80107912 | chr7:61971152-61971153 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
35 | rs76526908 | chr7:61971153-61971154 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
36 | rs535136319 | chr7:61971156-61971157 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
37 | rs376973076 | chr7:61971158-61971159 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
38 | rs75034385 | chr7:61971159-61971160 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
39 | rs571854941 | chr7:61971163-61971164 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
40 | rs71302008 | chr7:61971168-61971169 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
41 | rs545472116 | chr7:61971172-61971173 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
42 | rs79415513 | chr7:61971173-61971174 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
43 | rs557768263 | chr7:61971180-61971181 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
44 | rs74211243 | chr7:61971183-61971184 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
45 | rs75923298 | chr7:61971184-61971185 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
46 | rs71302007 | chr7:61971189-61971190 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
47 | rs79781454 | chr7:61971192-61971193 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs577440547 | chr7:61971198-61971199 | ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs370233838 | chr7:61971207-61971208 | ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs141126739 | chr7:61971208-61971209 | ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Wilms tumour | 21544195 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Seminomas | 18059402 | CNVD |
Testicular cancer | 18059402 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Autism | 19415332 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Malaria | 21533027 | CNVD |
Melanoma | 18172304 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
head and neck squamous cell carcinoma | 19289630 | CNVD |
Stenocardia | 21860640 | CNVD |
Vasospasm | 21860640 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Autism | 22495311 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Biliary cancer | 19435499 | CNVD |
Williams-beuren syndrome | 22470819 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Glioblastoma multiforme | 21750150 | CNVD |
Cancer | 21183584 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Gastric cancer | 24379144 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Lissencephaly | 21572526 | CNVD |
Breast cancer | 17603634 | CNVD |
Liposarcoma | 21253554 | CNVD |
Breast cancer | 16397240 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Astrocytoma | 17387387 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Low-grade fibromyxoid sarcoma | 0 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Breast cancer | 21264507 | CNVD |
Shwachman-Diamond syndrome | 22934832 | CNVD |
Glioblastoma | 21080181 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Cutaneous malignant melanoma | 17690212 | CNVD |
Leukemia | 17361228 | CNVD |
Breast cancer | 16461572 | CNVD |
Peripheral t-cell lymphoma | 19118030 | CNVD |
Malignant melanoma | 17690212 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Breast cancer | 21990379 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Astrocytoma | 22246337 | CNVD |
Renal cell carcinoma | 18592004 | CNVD |
Bipolar disorder | 19214233 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Breast cancer | 21364760 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Acute monocytic leukemia | 16498392 | CNVD |
Prostate cancer | 16461572 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Schizophrenia | 23813976 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Congenital anomalies of the kidney and urinary tract | 18316590 | CNVD |
Schizophrenia | 20967226 | CNVD |
Breast cancer | 22522925 | CNVD |
Schizophrenia | 21346763 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:61967200-61971600 | ZNF genes & repeats | Fetal Intestine Large | intestine |
2 | chr7:61967200-61971800 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
3 | chr7:61967200-61972200 | ZNF genes & repeats | Colon Smooth Muscle | Colon |
4 | chr7:61967200-61973600 | ZNF genes & repeats | Primary T cells from cord blood | blood |
5 | chr7:61967200-61973600 | ZNF genes & repeats | Primary T cells effector/memory enriched fromperipheralblood | blood |
6 | chr7:61967200-61973600 | ZNF genes & repeats | Gastric | stomach |
7 | chr7:61967200-61973600 | ZNF genes & repeats | Left Ventricle | heart |
8 | chr7:61967200-61973800 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
9 | chr7:61967200-61973800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
10 | chr7:61967200-61973800 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
11 | chr7:61967200-61973800 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
12 | chr7:61967200-61973800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
13 | chr7:61967200-61973800 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
14 | chr7:61967200-61973800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
15 | chr7:61967200-61973800 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
16 | chr7:61967200-61973800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
17 | chr7:61967200-61973800 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
18 | chr7:61967200-61973800 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
19 | chr7:61967200-61973800 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
20 | chr7:61967200-61973800 | ZNF genes & repeats | Primary T regulatory cells fromperipheralblood | blood |
21 | chr7:61967200-61973800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
22 | chr7:61967200-61973800 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
23 | chr7:61967200-61973800 | ZNF genes & repeats | HMEC | breast |
24 | chr7:61967200-61976600 | ZNF genes & repeats | Primary B cells from cord blood | blood |
25 | chr7:61967400-61971400 | ZNF genes & repeats | Primary T cells fromperipheralblood | blood |
26 | chr7:61967400-61973800 | ZNF genes & repeats | Fetal Stomach | stomach |
27 | chr7:61968200-61972000 | ZNF genes & repeats | A549 | lung |
28 | chr7:61968200-61973800 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
29 | chr7:61968800-61971400 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
30 | chr7:61968800-61971600 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
31 | chr7:61968800-61971800 | ZNF genes & repeats | Small Intestine | intestine |
32 | chr7:61968800-61973600 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
33 | chr7:61968800-61973800 | ZNF genes & repeats | Primary T helper cells fromperipheralblood | blood |
34 | chr7:61969600-61974800 | Weak transcription | Lung | lung |
35 | chr7:61969600-61974800 | Weak transcription | NHEK | skin |
36 | chr7:61970400-61973800 | ZNF genes & repeats | Liver | Liver |
37 | chr7:61970600-61971400 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
38 | chr7:61970600-61971600 | ZNF genes & repeats | Muscle Satellite Cultured Cells | -- |
39 | chr7:61970600-61971600 | ZNF genes & repeats | Fetal Lung | lung |
40 | chr7:61970600-61971600 | ZNF genes & repeats | Fetal Muscle Trunk | muscle |
41 | chr7:61970600-61971600 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
42 | chr7:61970600-61971600 | ZNF genes & repeats | Rectal Mucosa Donor 29 | rectum |
43 | chr7:61970600-61971600 | ZNF genes & repeats | Skeletal Muscle Female | skeletal muscle |
44 | chr7:61970600-61971600 | ZNF genes & repeats | Stomach Smooth Muscle | stomach |
45 | chr7:61970600-61971800 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
46 | chr7:61970600-61971800 | ZNF genes & repeats | Primary T helper naive cells fromperipheralblood | blood |
47 | chr7:61970600-61971800 | ZNF genes & repeats | Primary T helper 17 cells PMA-I stimulated | -- |
48 | chr7:61970600-61971800 | ZNF genes & repeats | Rectal Smooth Muscle | rectum |
49 | chr7:61970600-61972000 | ZNF genes & repeats | Brain Dorsolateral Prefrontal Cortex | brain |
50 | chr7:61970600-61972000 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |