The 2.0 version of rSNPBase

Variant report

Variant esv1167354
Chromosome Location chr19:40758509-40758511
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40732800-40759000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr19:40738000-40763800 Strong transcription Primary hematopoietic stem cells short term culture blood
3 chr19:40741600-40761000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr19:40743200-40760800 Weak transcription HMEC breast
5 chr19:40745800-40760800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr19:40746400-40760800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr19:40747200-40759400 Weak transcription Hela-S3 cervix
8 chr19:40747200-40760800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:40747400-40759200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr19:40748400-40761000 Weak transcription Small Intestine intestine
11 chr19:40748600-40759400 Weak transcription H9 Cell Line embryonic stem cell
12 chr19:40748800-40760800 Weak transcription NH-A brain
13 chr19:40749000-40759000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr19:40749400-40759200 Weak transcription HUVEC blood vessel
15 chr19:40750000-40763800 Strong transcription Thymus Thymus
16 chr19:40750000-40764000 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr19:40751000-40761800 Weak transcription Fetal Kidney kidney
18 chr19:40751200-40758600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr19:40751200-40761600 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr19:40751200-40771200 Weak transcription Fetal Heart heart
21 chr19:40751800-40763600 Strong transcription Fetal Stomach stomach
22 chr19:40752000-40759000 Weak transcription NHDF-Ad bronchial
23 chr19:40752600-40763400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr19:40752800-40763400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr19:40753000-40772000 Weak transcription Fetal Brain Male brain
26 chr19:40753200-40762800 Strong transcription Duodenum Smooth Muscle Duodenum
27 chr19:40753200-40763000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr19:40753200-40763600 Strong transcription Primary monocytes fromperipheralblood blood
29 chr19:40753200-40763800 Strong transcription Primary neutrophils fromperipheralblood blood
30 chr19:40753200-40764600 Strong transcription Primary T cells from cord blood blood
31 chr19:40753600-40763400 Strong transcription Fetal Thymus thymus
32 chr19:40753600-40763800 Strong transcription Dnd41 blood
33 chr19:40753800-40763400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr19:40753800-40763800 Strong transcription Primary T helper naive cells fromperipheralblood blood
35 chr19:40753800-40764400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr19:40754000-40763000 Strong transcription Brain Germinal Matrix brain
37 chr19:40754200-40759800 Strong transcription Fetal Muscle Leg muscle
38 chr19:40754200-40760800 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr19:40754400-40758600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr19:40754600-40759000 Weak transcription Brain Anterior Caudate brain
41 chr19:40754600-40759000 Weak transcription NHEK skin
42 chr19:40754600-40759600 Weak transcription Colon Smooth Muscle Colon
43 chr19:40755000-40763200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr19:40755000-40763800 Strong transcription Placenta Placenta
45 chr19:40755200-40763600 Strong transcription GM12878-XiMat blood
46 chr19:40755400-40763600 Strong transcription Primary T regulatory cells fromperipheralblood blood
47 chr19:40755600-40759200 Strong transcription Esophagus oesophagus
48 chr19:40755600-40760800 Weak transcription Colonic Mucosa Colon
49 chr19:40755600-40762400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr19:40755600-40763000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015