Variant report
Variant | esv12578 |
---|---|
Chromosome Location | chr22:21653692-21797733 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2726)
- CpG islands (count:1038)
- Chromatin interactive region (count:2)
- LncRNA region (count:47)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BATF | chr22:21659286-21659493 | GM12878 | blood: | n/a | n/a |
2 | BATF | chr22:21679248-21679454 | GM12878 | blood: | n/a | n/a |
3 | BATF | chr22:21653924-21654130 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr22:21665661-21665880 | GM12878 | blood: | n/a | n/a |
5 | BATF | chr22:21738444-21738711 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr22:21661858-21662246 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:21664502-21664702 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:21671350-21671638 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:21664688-21664901 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:21661897-21662111 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:21686882-21687165 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:21670784-21671270 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr22:21660566-21660798 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr22:21680752-21681052 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr22:21661486-21661800 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr22:21680010-21680280 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr22:21771592-21771785 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr22:21668510-21668775 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr22:21686970-21687232 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr22:21754245-21754462 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr22:21680010-21680279 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr22:21691873-21692088 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr22:21667217-21667566 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr22:21666477-21666908 | GM12878 | blood: | n/a | chr22:21666820-21666830 |
25 | BATF | chr22:21665627-21665835 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr22:21667975-21668247 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr22:21677006-21677202 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr22:21680783-21681060 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr22:21655763-21656117 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr22:21662377-21662584 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr22:21656504-21656819 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr22:21659324-21659520 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr22:21668512-21668704 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr22:21738418-21738724 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr22:21679254-21679450 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr22:21680772-21681085 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr22:21670020-21670241 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr22:21654185-21654429 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr22:21671391-21671676 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr22:21670778-21671366 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr22:21660283-21660476 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr22:21655793-21655980 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr22:21674427-21674617 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr22:21662762-21663166 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr22:21680018-21680203 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr22:21660824-21661114 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr22:21675029-21675236 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr22:21660257-21660673 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr22:21654739-21654965 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr22:21675400-21675620 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21774669-21774719 | Jurkat | blood: | n/a |
2 | chr22:21774669-21774719 | Jurkat | blood: | n/a |
3 | chr22:21771551-21771601 | NT2-D1 | testis: | n/a |
4 | chr22:21771551-21771601 | HMEC | breast: | n/a |
5 | chr22:21772272-21772322 | H1-hESC | embryonic stem cell: | embryo |
6 | chr22:21772272-21772322 | NH-A | brain: | n/a |
7 | chr22:21660828-21660878 | Hepatocyte | liver: | n/a |
8 | chr22:21664376-21664426 | HCPEpiC | choroid plexus: | n/a |
9 | chr22:21692413-21692463 | HIPEpiC | eye: | n/a |
10 | chr22:21715770-21715820 | SK-N-MC | brain: | n/a |
11 | chr22:21772272-21772322 | HAEpiC | amniotic membrane: | n/a |
12 | chr22:21660828-21660878 | ProgFib | skin: | n/a |
13 | chr22:21770855-21770905 | GM19239 | blood: | n/a |
14 | chr22:21772272-21772322 | HMEC | breast: | n/a |
15 | chr22:21714908-21714958 | SKMC | muscle: | n/a |
16 | chr22:21773494-21773544 | HCPEpiC | choroid plexus: | n/a |
17 | chr22:21710822-21710872 | T-47D | breast: | n/a |
18 | chr22:21774669-21774719 | HUVEC | blood vessel: | n/a |
19 | chr22:21692413-21692463 | AG04450 | lung: | fetal |
20 | chr22:21714051-21714101 | SK-N-MC | brain: | n/a |
21 | chr22:21660828-21660878 | U87 | brain: | n/a |
22 | chr22:21714051-21714101 | HCT-116 | colon: | n/a |
23 | chr22:21771551-21771601 | HAEpiC | amniotic membrane: | n/a |
24 | chr22:21718166-21718216 | GM12878 | blood: | n/a |
25 | chr22:21718166-21718216 | HCPEpiC | choroid plexus: | n/a |
26 | chr22:21695329-21695379 | AG09319 | gingival: | n/a |
27 | chr22:21692413-21692463 | LNCaP | prostate: | n/a |
28 | chr22:21698406-21698456 | SK-N-SH_RA | brain: | n/a |
29 | chr22:21735028-21735078 | BE2_C | brain: | n/a |
30 | chr22:21660828-21660878 | SK-N-MC | brain: | n/a |
31 | chr22:21710822-21710872 | HIPEpiC | eye: | n/a |
32 | chr22:21772272-21772322 | HCPEpiC | choroid plexus: | n/a |
33 | chr22:21710822-21710872 | GM06990 | blood: | n/a |
34 | chr22:21692413-21692463 | H1-hESC | embryonic stem cell: | embryo |
35 | chr22:21695329-21695379 | AG09309 | skin: | n/a |
36 | chr22:21698406-21698456 | RPTEC | kidney: | n/a |
37 | chr22:21698406-21698456 | AG09319 | gingival: | n/a |
38 | chr22:21735028-21735078 | NB4 | blood: | n/a |
39 | chr22:21664376-21664426 | HepG2 | liver: | n/a |
40 | chr22:21773494-21773544 | GM19239 | blood: | n/a |
41 | chr22:21715770-21715820 | AG09319 | gingival: | n/a |
42 | chr22:21695329-21695379 | HCF | heart: | n/a |
43 | chr22:21718166-21718216 | HEEpiC | esophagus: | n/a |
44 | chr22:21714908-21714958 | T-47D | breast: | n/a |
45 | chr22:21695329-21695379 | SK-N-SH | brain: | n/a |
46 | chr22:21735028-21735078 | AG04450 | lung: | fetal |
47 | chr22:21695329-21695379 | H1-hESC | embryonic stem cell: | embryo |
48 | chr22:21714908-21714958 | MCF-7 | breast: | n/a |
49 | chr22:21770855-21770905 | HEK293 | kidney: | embryo |
50 | chr22:21773494-21773544 | HRPEpiC | eye: | n/a |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-RIMBP3B-2 | chr22:21725711-21725760 | l_2251_chr22:21725710-21727925_testes |
2 | lnc-GGT2-2 | chr22:21673559-21673645 | ENSG00000206142 |
3 | lnc-GGT2-2 | chr22:21655286-21655713 | NONHSAT083653 |
4 | lnc-GGT2-2 | chr22:21666528-21666589 | ENSG00000206142 |
5 | lnc-GGT2-2 | chr22:21676237-21676616 | ENSG00000206142 |
6 | lnc-GGT2-2 | chr22:21660358-21661314 | NONHSAT083653 |
7 | lnc-GGT2-2 | chr22:21666528-21666589 | ENSG00000206142 |
8 | lnc-GGT2-2 | chr22:21666029-21666062 | ENSG00000206142 |
9 | lnc-AP000552.1-1 | chr22:21668536-21669193 | ENSG00000237407 |
10 | lnc-GGT2-2 | chr22:21677152-21677166 | ENSG00000206142 |
11 | lnc-GGT2-2 | chr22:21677085-21677143 | ENSG00000206142 |
12 | lnc-GGT2-2 | chr22:21677085-21677273 | ENSG00000206142 |
13 | lnc-GGT2-2 | chr22:21668589-21668654 | ENSG00000206142 |
14 | lnc-GGT2-2 | chr22:21679120-21679226 | ENSG00000206142 |
15 | lnc-AP000552.1-1 | chr22:21667209-21667325 | ENSG00000237407 |
16 | lnc-GGT2-2 | chr22:21677085-21677224 | ENSG00000206142 |
17 | lnc-GGT2-2 | chr22:21677085-21677143 | ENSG00000206142 |
18 | lnc-GGT2-2 | chr22:21666029-21666062 | ENSG00000206142 |
19 | lnc-GGT2-2 | chr22:21676484-21676616 | ENSG00000206142 |
20 | lnc-GGT2-2 | chr22:21666528-21666589 | ENSG00000206142 |
21 | lnc-RIMBP3B-1 | chr22:21743480-21743780 | NONHSAT083665 |
22 | lnc-GGT2-2 | chr22:21676592-21676616 | ENSG00000206142 |
23 | lnc-GGT2-2 | chr22:21673559-21673645 | NONHSAT083653 |
24 | lnc-GGT2-2 | chr22:21677085-21677147 | ENSG00000206142 |
25 | lnc-GGT2-2 | chr22:21673559-21673645 | ENSG00000206142 |
26 | lnc-GGT2-2 | chr22:21677085-21677143 | ENSG00000206142 |
27 | lnc-GGT2-2 | chr22:21676592-21676616 | ENSG00000206142 |
28 | lnc-GGT2-2 | chr22:21668589-21668654 | NONHSAT083653 |
29 | lnc-GGT2-2 | chr22:21676592-21676616 | ENSG00000206142 |
30 | lnc-GGT2-2 | chr22:21673559-21673645 | ENSG00000206142 |
31 | lnc-GGT2-2 | chr22:21666528-21666589 | NONHSAT083653 |
32 | lnc-RIMBP3B-2 | chr22:21726368-21726939 | l_2251_chr22:21725710-21727925_testes |
33 | lnc-GGT2-2 | chr22:21666029-21666062 | NONHSAT083653 |
34 | lnc-GGT2-2 | chr22:21668589-21668654 | ENSG00000206142 |
35 | lnc-GGT2-2 | chr22:21675881-21676008 | ENSG00000206142 |
36 | lnc-RIMBP3B-2 | chr22:21727743-21727925 | l_2251_chr22:21725710-21727925_testes |
37 | lnc-GGT2-2 | chr22:21660358-21661314 | ENSG00000206142 |
38 | lnc-GGT2-2 | chr22:21676592-21676616 | NONHSAT083653 |
39 | lnc-GGT2-2 | chr22:21673559-21673645 | ENSG00000206142 |
40 | lnc-GGT2-2 | chr22:21666029-21666062 | ENSG00000206142 |
41 | lnc-GGT2-2 | chr22:21677085-21677166 | NONHSAT083653 |
42 | lnc-GGT2-2 | chr22:21668589-21668654 | ENSG00000206142 |
43 | lnc-GGT2-2 | chr22:21679120-21679256 | ENSG00000206142 |
44 | lnc-GGT2-2 | chr22:21676430-21676616 | ENSG00000206142 |
45 | lnc-GGT2-2 | chr22:21679120-21679256 | ENSG00000206142 |
46 | lnc-GGT2-2 | chr22:21655286-21655713 | ENSG00000206142 |
47 | lnc-GGT2-2 | chr22:21679120-21679331 | ENSG00000206142 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000252020 | TF binding region |
ENSG00000226534 | TF binding region |
RN7SKP63 | TF binding region |
ENSG00000252402 | TF binding region |
BCRP6 | TF binding region |
ENSG00000237407 | TF binding region |
PPP1R26P5 | TF binding region |
ENSG00000252314 | TF binding region |
RIMBP3B | TF binding region |
HIC2 | TF binding region |
FAM230C | TF binding region |
ENSG00000252020 | CpG island |
ENSG00000226534 | CpG island |
RN7SKP63 | CpG island |
ENSG00000252402 | CpG island |
BCRP6 | CpG island |
ENSG00000237407 | CpG island |
PPP1R26P5 | CpG island |
ENSG00000252314 | CpG island |
RIMBP3B | CpG island |
HIC2 | CpG island |
FAM230C | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs145072845 | chr22:21653730-21653731 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs375384192 | chr22:21653833-21653834 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs113273308 | chr22:21653853-21653854 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs181280643 | chr22:21655514-21655515 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
5 | rs62234746 | chr22:21655619-21655620 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
6 | rs9606770 | chr22:21660440-21660441 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
7 | rs534078446 | chr22:21660569-21660570 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
8 | rs470342 | chr22:21660573-21660574 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
9 | rs9621078 | chr22:21660580-21660581 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
10 | rs9606771 | chr22:21660587-21660588 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
11 | rs9609066 | chr22:21660701-21660702 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
12 | rs9609067 | chr22:21660807-21660808 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
13 | rs554333566 | chr22:21660828-21660829 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
14 | rs577325004 | chr22:21660835-21660836 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
15 | rs546379472 | chr22:21660838-21660839 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
16 | rs9609068 | chr22:21661068-21661069 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
17 | rs9621080 | chr22:21661128-21661129 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
18 | rs542837 | chr22:21662211-21662212 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs9609071 | chr22:21662571-21662572 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs7289101 | chr22:21662663-21662664 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs9609075 | chr22:21662686-21662687 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs186705931 | chr22:21662747-21662748 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs9621088 | chr22:21662748-21662749 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs9619135 | chr22:21662885-21662886 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs373164349 | chr22:21662991-21662992 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs377698983 | chr22:21662997-21662998 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs370002653 | chr22:21663023-21663024 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs9680800 | chr22:21663116-21663117 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs9680767 | chr22:21663131-21663132 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs374575055 | chr22:21663158-21663159 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs377368605 | chr22:21663206-21663207 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs370320919 | chr22:21663260-21663261 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs374730536 | chr22:21663288-21663289 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs376512932 | chr22:21663315-21663316 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs371004112 | chr22:21663342-21663343 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs17857193 | chr22:21663343-21663344 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs17857192 | chr22:21663348-21663349 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs561715190 | chr22:21663368-21663369 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs374327074 | chr22:21663369-21663370 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs201508032 | chr22:21663374-21663375 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs17857196 | chr22:21663375-21663376 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs17857195 | chr22:21663387-21663388 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs17857194 | chr22:21663391-21663392 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs199650322 | chr22:21663401-21663402 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs9680777 | chr22:21663404-21663405 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs372169787 | chr22:21663422-21663423 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs374607482 | chr22:21663423-21663424 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs367675106 | chr22:21663429-21663430 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs571462888 | chr22:21663455-21663456 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs17855634 | chr22:21663457-21663458 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21714800-21715000 | Bivalent/Poised TSS | H1 Cell Line | embryonic stem cell |
2 | chr22:21718200-21718400 | Bivalent Enhancer | ES-I3 Cell Line | embryonic stem cell |
3 | chr22:21722400-21724800 | Weak transcription | Right Atrium | heart |
4 | chr22:21756400-21756600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
5 | chr22:21756400-21757200 | Enhancers | K562 | blood |
6 | chr22:21756400-21757400 | Enhancers | Primary monocytes fromperipheralblood | blood |
7 | chr22:21756400-21757400 | Enhancers | Monocytes-CD14+_RO01746 | blood |
8 | chr22:21756400-21757600 | Active TSS | HepG2 | liver |
9 | chr22:21757200-21757400 | Flanking Active TSS | K562 | blood |
10 | chr22:21757400-21757800 | Enhancers | K562 | blood |
11 | chr22:21757600-21757800 | Flanking Active TSS | HepG2 | liver |
12 | chr22:21757600-21758000 | Enhancers | Fetal Intestine Large | intestine |
13 | chr22:21770400-21770600 | Enhancers | K562 | blood |
14 | chr22:21770600-21770800 | Enhancers | Primary T cells fromperipheralblood | blood |
15 | chr22:21770600-21771000 | Active TSS | HUES64 Cell Line | embryonic stem cell |
16 | chr22:21770600-21771000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
17 | chr22:21770600-21771000 | Enhancers | Primary T helper cells fromperipheralblood | blood |
18 | chr22:21770600-21771000 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
19 | chr22:21770600-21771000 | Active TSS | HepG2 | liver |
20 | chr22:21770600-21771000 | Flanking Active TSS | K562 | blood |
21 | chr22:21770600-21772400 | Active TSS | H1 Cell Line | embryonic stem cell |
22 | chr22:21770800-21771000 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
23 | chr22:21770800-21771000 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
24 | chr22:21770800-21771000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
25 | chr22:21770800-21771000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
26 | chr22:21770800-21771000 | Enhancers | Adipose Nuclei | Adipose |
27 | chr22:21770800-21771000 | Enhancers | Monocytes-CD14+_RO01746 | blood |
28 | chr22:21770800-21772200 | Weak transcription | Primary T cells fromperipheralblood | blood |
29 | chr22:21771000-21771600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
30 | chr22:21771000-21772000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
31 | chr22:21771000-21772000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
32 | chr22:21771000-21772000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
33 | chr22:21771000-21772000 | Weak transcription | K562 | blood |
34 | chr22:21771000-21772000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
35 | chr22:21771000-21772200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
36 | chr22:21771000-21773200 | Weak transcription | HepG2 | liver |
37 | chr22:21771600-21772000 | Active TSS | Sigmoid Colon | Sigmoid Colon |
38 | chr22:21771600-21772200 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
39 | chr22:21771600-21772200 | Active TSS | Gastric | stomach |
40 | chr22:21771600-21772400 | Active TSS | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
41 | chr22:21771600-21772400 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
42 | chr22:21771600-21772400 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
43 | chr22:21771600-21772400 | Active TSS | H9 Cell Line | embryonic stem cell |
44 | chr22:21771600-21772400 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
45 | chr22:21771600-21772400 | Active TSS | Cortex derived primary cultured neurospheres | brain |
46 | chr22:21771600-21772400 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
47 | chr22:21771600-21772400 | Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
48 | chr22:21771600-21772400 | Active TSS | Aorta | Aorta |
49 | chr22:21771600-21772400 | Active TSS | Esophagus | oesophagus |
50 | chr22:21771600-21772400 | Active TSS | Pancreatic Islets | Pancreatic Islet |