No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs573321318 |
chr6:12009133-12009134 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs183846144 |
chr6:12009179-12009180 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs544658293 |
chr6:12009181-12009182 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs4714111 |
chr6:12009211-12009212 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs533546590 |
chr6:12009230-12009231 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs13196360 |
chr6:12009256-12009257 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs560404414 |
chr6:12009277-12009278 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs528122388 |
chr6:12009323-12009324 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs547784428 |
chr6:12009354-12009355 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs578108098 |
chr6:12009355-12009356 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs567676542 |
chr6:12009357-12009358 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs548498605 |
chr6:12009359-12009360 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs573147284 |
chr6:12009362-12009363 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs530537076 |
chr6:12009402-12009403 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs550623455 |
chr6:12009478-12009479 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs187026901 |
chr6:12009551-12009552 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs77090747 |
chr6:12009562-12009563 |
Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs114413521 |
chr6:12009601-12009602 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs368885095 |
chr6:12009621-12009622 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs147016340 |
chr6:12009639-12009640 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs192083931 |
chr6:12009647-12009648 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs370062616 |
chr6:12009650-12009651 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs138175882 |
chr6:12009653-12009654 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs535703593 |
chr6:12009681-12009682 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs185453656 |
chr6:12009688-12009689 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|