The 2.0 version of rSNPBase

Variant report

Variant esv1287697
Chromosome Location chr5:61730986-61730988
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:61709200-61770800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr5:61709400-61763400 Weak transcription Aorta Aorta
3 chr5:61709600-61738800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr5:61709600-61738800 Weak transcription Fetal Muscle Trunk muscle
5 chr5:61709600-61739800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr5:61709600-61744000 Weak transcription Primary T cells fromperipheralblood blood
7 chr5:61709800-61738800 Weak transcription Fetal Kidney kidney
8 chr5:61709800-61743800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr5:61709800-61746000 Weak transcription Primary hematopoietic stem cells blood
10 chr5:61709800-61746600 Weak transcription Fetal Thymus thymus
11 chr5:61709800-61769000 Weak transcription NH-A brain
12 chr5:61709800-61809200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr5:61710000-61734200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr5:61710000-61734200 Weak transcription Fetal Intestine Small intestine
15 chr5:61710000-61737400 Weak transcription Fetal Intestine Large intestine
16 chr5:61710000-61739000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr5:61710000-61746000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr5:61710200-61733400 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr5:61710200-61738800 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr5:61710200-61746000 Weak transcription Primary B cells from cord blood blood
21 chr5:61710400-61733600 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr5:61710400-61739000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr5:61710400-61746000 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr5:61710600-61738800 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr5:61710600-61739000 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr5:61710600-61739200 Weak transcription HMEC breast
27 chr5:61710600-61739200 Weak transcription NHEK skin
28 chr5:61710600-61744000 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr5:61710600-61746000 Weak transcription A549 lung
30 chr5:61710800-61739000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr5:61710800-61745400 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr5:61710800-61746000 Weak transcription HepG2 liver
33 chr5:61711000-61733400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr5:61712000-61746000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr5:61714000-61746600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr5:61715000-61747200 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr5:61715200-61738800 Weak transcription Primary B cells from peripheral blood blood
38 chr5:61715400-61733000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr5:61715400-61735600 Weak transcription Dnd41 blood
40 chr5:61715800-61733400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr5:61715800-61739000 Weak transcription Hela-S3 cervix
42 chr5:61720800-61733400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr5:61722800-61770600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr5:61725000-61738800 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr5:61725800-61747200 Weak transcription Thymus Thymus
46 chr5:61726200-61746200 Weak transcription HUVEC blood vessel
47 chr5:61726400-61747200 Weak transcription H9 Cell Line embryonic stem cell
48 chr5:61727400-61742400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr5:61727600-61742600 Weak transcription Fetal Stomach stomach
50 chr5:61728200-61735600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015