The 2.0 version of rSNPBase

Variant report

Variant esv1310346
Chromosome Location chr15:31279890-31279894
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:31242000-31282800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr15:31248800-31283000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr15:31250200-31282200 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr15:31250800-31282400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr15:31251200-31282400 Weak transcription H9 Cell Line embryonic stem cell
6 chr15:31251600-31282200 Weak transcription Hela-S3 cervix
7 chr15:31252800-31282400 Weak transcription H1 Cell Line embryonic stem cell
8 chr15:31256000-31282400 Weak transcription Fetal Brain Male brain
9 chr15:31262200-31282200 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr15:31267800-31282000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr15:31274800-31280000 Strong transcription Fetal Intestine Large intestine
12 chr15:31274800-31280400 Strong transcription Fetal Muscle Trunk muscle
13 chr15:31275000-31281400 Genic enhancers Primary B cells from peripheral blood blood
14 chr15:31275400-31280800 Strong transcription Primary hematopoietic stem cells blood
15 chr15:31275600-31280200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr15:31276800-31280400 Genic enhancers Primary T helper cells fromperipheralblood blood
17 chr15:31277000-31280600 Enhancers Right Ventricle heart
18 chr15:31277000-31282200 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr15:31277200-31280200 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr15:31277200-31280200 Strong transcription Dnd41 blood
21 chr15:31277200-31280600 Strong transcription HUES6 Cell Line embryonic stem cell
22 chr15:31277200-31280600 Genic enhancers Thymus Thymus
23 chr15:31277200-31282200 Weak transcription Placenta Amnion Placenta Amnion
24 chr15:31277400-31280600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
25 chr15:31277400-31282200 Weak transcription Brain Germinal Matrix brain
26 chr15:31277600-31280200 Genic enhancers Placenta Placenta
27 chr15:31277600-31280600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr15:31277600-31282200 Enhancers Skeletal Muscle Male skeletal muscle
29 chr15:31277800-31280000 Strong transcription Fetal Thymus thymus
30 chr15:31277800-31280400 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr15:31277800-31280600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr15:31277800-31280600 Genic enhancers Brain Angular Gyrus brain
33 chr15:31277800-31281400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr15:31277800-31282000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr15:31277800-31282000 Weak transcription Ovary ovary
36 chr15:31277800-31282400 Weak transcription Fetal Brain Female brain
37 chr15:31278000-31280600 Genic enhancers Left Ventricle heart
38 chr15:31278000-31281200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr15:31278200-31280000 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr15:31278200-31280200 Strong transcription Primary B cells from cord blood blood
41 chr15:31278200-31280200 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr15:31278200-31280200 Weak transcription Small Intestine intestine
43 chr15:31278200-31280200 Weak transcription GM12878-XiMat blood
44 chr15:31278200-31280200 Weak transcription HSMM muscle
45 chr15:31278200-31280400 Weak transcription Colon Smooth Muscle Colon
46 chr15:31278200-31280400 Strong transcription Stomach Smooth Muscle stomach
47 chr15:31278200-31280600 Genic enhancers Brain Cingulate Gyrus brain
48 chr15:31278200-31281200 Weak transcription NHDF-Ad bronchial
49 chr15:31278200-31282200 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr15:31278200-31282200 Weak transcription HMEC breast

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Last update: Aug 31, 2015