The 2.0 version of rSNPBase

Variant report

Variant esv1319697
Chromosome Location chr1:180155382-180155383
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180125600-180159200 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:180134000-180167600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:180134400-180168800 Strong transcription Primary monocytes fromperipheralblood blood
4 chr1:180135000-180169000 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr1:180136200-180167200 Weak transcription Dnd41 blood
6 chr1:180137200-180155400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:180137400-180157800 Weak transcription HSMMtube muscle
8 chr1:180137800-180159200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:180138200-180158000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:180138200-180172800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:180138800-180157600 Weak transcription K562 blood
12 chr1:180140200-180167200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:180142600-180157800 Strong transcription Primary neutrophils fromperipheralblood blood
14 chr1:180143400-180171600 Strong transcription Fetal Stomach stomach
15 chr1:180143800-180156000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:180143800-180169000 Weak transcription Small Intestine intestine
17 chr1:180143800-180170000 Strong transcription Osteobl bone
18 chr1:180144000-180166800 Weak transcription Psoas Muscle Psoas
19 chr1:180144200-180166400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:180144600-180168400 Strong transcription Ovary ovary
21 chr1:180144800-180161600 Strong transcription Placenta Placenta
22 chr1:180145200-180155400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:180145200-180159600 Weak transcription Liver Liver
24 chr1:180145200-180160800 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:180145400-180157000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:180146400-180164000 Weak transcription Right Atrium heart
27 chr1:180147800-180166000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:180148000-180165400 Strong transcription NHEK skin
29 chr1:180148000-180168400 Strong transcription Stomach Smooth Muscle stomach
30 chr1:180148200-180159600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr1:180148200-180161400 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr1:180148200-180162800 Strong transcription Sigmoid Colon Sigmoid Colon
33 chr1:180148600-180156000 Strong transcription HUVEC blood vessel
34 chr1:180148600-180168800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:180149200-180156800 Weak transcription NHDF-Ad bronchial
36 chr1:180150200-180161200 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr1:180150200-180171200 Strong transcription NHLF lung
38 chr1:180150400-180155400 Strong transcription HUES48 Cell Line embryonic stem cell
39 chr1:180150400-180161200 Strong transcription Left Ventricle heart
40 chr1:180150400-180162400 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr1:180150400-180168800 Strong transcription Lung lung
42 chr1:180150600-180161200 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr1:180150600-180167400 Strong transcription Adipose Nuclei Adipose
44 chr1:180150800-180167800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:180150800-180168200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:180151000-180155400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:180151000-180155400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:180151000-180155600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:180151000-180155800 Strong transcription Rectal Smooth Muscle rectum
50 chr1:180151000-180156400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015