The 2.0 version of rSNPBase

Variant report

Variant esv1324585
Chromosome Location chr17:15346779-15346780
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:15333600-15361000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr17:15335600-15348000 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr17:15336600-15347600 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr17:15338400-15362200 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr17:15339400-15354800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr17:15339400-15358800 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr17:15339600-15367000 Weak transcription A549 lung
8 chr17:15340000-15355400 Weak transcription Hela-S3 cervix
9 chr17:15340000-15355800 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr17:15340000-15357400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr17:15340200-15348000 Weak transcription Primary hematopoietic stem cells blood
12 chr17:15340200-15354800 Weak transcription Osteobl bone
13 chr17:15340200-15355600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr17:15340400-15348000 Weak transcription Ovary ovary
15 chr17:15340400-15355600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr17:15340400-15356000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr17:15340400-15359000 Weak transcription Colon Smooth Muscle Colon
18 chr17:15340600-15348000 Weak transcription Primary T cells from cord blood blood
19 chr17:15340600-15348000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr17:15340600-15359800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr17:15340600-15360200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr17:15340600-15360200 Weak transcription Fetal Thymus thymus
23 chr17:15340600-15366200 Weak transcription Gastric stomach
24 chr17:15340600-15366800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr17:15340600-15399600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr17:15340800-15348000 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr17:15340800-15348000 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr17:15340800-15348200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr17:15341000-15348200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr17:15341000-15351800 Weak transcription Pancreas Pancrea
31 chr17:15341200-15348000 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr17:15341200-15352000 Weak transcription Fetal Muscle Trunk muscle
33 chr17:15341200-15355600 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr17:15341200-15356200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr17:15341200-15359800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr17:15341400-15347200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr17:15341400-15347800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr17:15341400-15348000 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr17:15341400-15351400 Weak transcription Fetal Muscle Leg muscle
40 chr17:15341400-15355400 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr17:15341400-15356000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr17:15341400-15359600 Weak transcription Stomach Smooth Muscle stomach
43 chr17:15341400-15360200 Weak transcription Aorta Aorta
44 chr17:15341400-15360800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr17:15341400-15366800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr17:15341400-15366800 Weak transcription Esophagus oesophagus
47 chr17:15341400-15368400 Weak transcription H9 Cell Line embryonic stem cell
48 chr17:15341400-15375800 Weak transcription H1 Cell Line embryonic stem cell
49 chr17:15341600-15347600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr17:15341600-15357200 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015