Variant report
Variant | esv13309 |
---|---|
Chromosome Location | chr13:66746811-66759444 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs543875015 | chr13:66755067-66755068 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs534618259 | chr13:66755096-66755097 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs184691237 | chr13:66755105-66755106 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs562188052 | chr13:66755116-66755117 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs577911777 | chr13:66755155-66755156 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs372238125 | chr13:66755208-66755209 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs189829726 | chr13:66755213-66755214 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs557222505 | chr13:66755255-66755256 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs375636458 | chr13:66755313-66755314 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs112055699 | chr13:66755327-66755328 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs181286066 | chr13:66755328-66755329 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs559907748 | chr13:66755380-66755381 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs185918332 | chr13:66755395-66755396 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs369866479 | chr13:66755820-66755821 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs536453817 | chr13:66755832-66755833 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs553161252 | chr13:66755899-66755900 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs573326263 | chr13:66755922-66755923 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs4605028 | chr13:66755945-66755946 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs148095957 | chr13:66755988-66755989 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs186173169 | chr13:66756018-66756019 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs113873714 | chr13:66756026-66756027 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs561252095 | chr13:66756031-66756032 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs141881167 | chr13:66756056-66756057 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs116016476 | chr13:66756062-66756063 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs560519046 | chr13:66756092-66756093 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs528219470 | chr13:66756120-66756121 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs73203640 | chr13:66756121-66756122 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
28 | rs34875124 | chr13:66756123-66756124 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs2093542 | chr13:66756133-66756134 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
30 | rs534054656 | chr13:66756229-66756230 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs191024346 | chr13:66756263-66756264 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs145065798 | chr13:66756352-66756353 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs182865919 | chr13:66756366-66756367 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
HIV/AIDS | 22032296 | CNVD |
Prostate cancer | 16705090 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Intellectual disability | 22102821 | CNVD |
Cancer | 20164919 | CNVD |
Autism | 22495311 | CNVD |
Chordoma | 21602918 | CNVD |
Bladder cancer | 21949216 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Cancer | 21637783 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 21518781 | CNVD |
colon cancer | 17210682 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Intracranial aneurysm | 19064780 | CNVD |
Breast cancer | 19287154 | CNVD |
Acute myeloid leukemia | 18379011 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Olfactory neuroblastoma | 18408657 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Ependymoma | 16718352 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Colorectal cancer | 16272173 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Squamous cell cancer | 20885788 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Breast cancer | 16608533 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Breast cancer | 17133270 | CNVD |
Myoepithelioma | 18604193 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Prostate cancer | 16573809 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Paraganglioma | 21461997 | CNVD |
Pheochromocytoma | 21461997 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Prostate cancer | 17245344 | CNVD |
Prostate cancer | 18632612 | CNVD |
Colorectal cancer | 21586687 | CNVD |
Small bowel adenocarcinoma | 21586687 | CNVD |
Retinoblastoma | 19183342 | CNVD |
Developmental delay | 21147756 | CNVD |
Melanoma | 18172304 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Merkel cell carcinoma | 19020549 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Non-syndromic sensorineural hearing loss | 18496225 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Breast cancer | 21858162 | CNVD |
Glioblastoma multiforme | 21922591 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Gastric cancer | 17908304 | CNVD |
Glioblastoma multiforme | 21750150 | CNVD |
Breast cancer | 17603634 | CNVD |
Cancer | 21183584 | CNVD |
Breast cancer | 17393978 | CNVD |
Splenic marginal zone lymphoma | 18492102 | CNVD |
Liposarcoma | 21253554 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
head and neck squamous cell carcinoma | 17671120 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
abnormal development | 18461090 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Chronic lymphocytic leukemia | 20421269 | CNVD |
Acute lymphoblastic leukemia | 21980252 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Prostate cancer | 16461572 | CNVD |
Congenital anomalies of the kidney and urinary tract | 18316590 | CNVD |
Schizophrenia | 23813976 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr13:66755000-66755400 | Enhancers | Aorta | Aorta |
2 | chr13:66755800-66756400 | Enhancers | Skeletal Muscle Female | skeletal muscle |