The 2.0 version of rSNPBase

Variant report

Variant esv1367954
Chromosome Location chr11:5722164-5722171
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:5712000-5723000 Weak transcription Fetal Stomach stomach
2 chr11:5712200-5723600 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr11:5712200-5725200 Weak transcription Fetal Heart heart
4 chr11:5712400-5723000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr11:5712400-5723000 Weak transcription Fetal Intestine Large intestine
6 chr11:5712400-5730200 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr11:5712400-5730600 Weak transcription Fetal Lung lung
8 chr11:5712400-5731800 Weak transcription NH-A brain
9 chr11:5712400-5732400 Weak transcription Pancreas Pancrea
10 chr11:5712400-5732400 Weak transcription Stomach Mucosa stomach
11 chr11:5712600-5723800 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr11:5712600-5729200 Weak transcription Esophagus oesophagus
13 chr11:5712600-5730200 Weak transcription NHEK skin
14 chr11:5712600-5732000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr11:5712600-5732600 Weak transcription Colonic Mucosa Colon
16 chr11:5713000-5723000 Weak transcription Right Ventricle heart
17 chr11:5713000-5726000 Weak transcription Left Ventricle heart
18 chr11:5713000-5734600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr11:5713600-5730800 Weak transcription Brain Anterior Caudate brain
20 chr11:5713600-5734800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr11:5713600-5745800 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr11:5713800-5729800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr11:5713800-5731200 Weak transcription Brain Cingulate Gyrus brain
24 chr11:5714000-5732600 Weak transcription Brain Substantia Nigra brain
25 chr11:5715200-5733000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr11:5715800-5729200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr11:5716200-5724200 Strong transcription Osteobl bone
28 chr11:5717400-5722800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr11:5717400-5726200 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr11:5717400-5732400 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr11:5717400-5734400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr11:5717600-5722400 Strong transcription Primary T helper naive cells from peripheral blood blood
33 chr11:5717600-5731200 Strong transcription Primary T cells fromperipheralblood blood
34 chr11:5717600-5732600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr11:5718000-5728800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr11:5718000-5734600 Weak transcription HUVEC blood vessel
37 chr11:5718400-5729000 Weak transcription Fetal Muscle Leg muscle
38 chr11:5718800-5722600 Strong transcription Primary T killer memory cells from peripheral blood blood
39 chr11:5720000-5722600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
40 chr11:5720000-5722600 Weak transcription Colon Smooth Muscle Colon
41 chr11:5720000-5727000 Weak transcription Ovary ovary
42 chr11:5720000-5727600 Weak transcription HSMMtube muscle
43 chr11:5720000-5729200 Weak transcription Aorta Aorta
44 chr11:5720000-5729200 Weak transcription Gastric stomach
45 chr11:5720000-5729200 Weak transcription Spleen Spleen
46 chr11:5720000-5732600 Weak transcription Brain Hippocampus Middle brain
47 chr11:5720200-5722800 Weak transcription Thymus Thymus
48 chr11:5720200-5723800 Weak transcription Primary hematopoietic stem cells blood
49 chr11:5720200-5724000 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr11:5720200-5724200 Weak transcription Liver Liver

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Last update: Aug 31, 2015