The 2.0 version of rSNPBase

Variant report

Variant esv1377643
Chromosome Location chr5:36932904-36932905
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36907400-36938200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr5:36919600-36938200 Weak transcription Pancreas Pancrea
3 chr5:36919800-36953000 Weak transcription Primary B cells from peripheral blood blood
4 chr5:36919800-36961600 Weak transcription K562 blood
5 chr5:36920400-36951400 Weak transcription Primary hematopoietic stem cells blood
6 chr5:36923600-36943600 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr5:36924600-36943600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr5:36924800-36933000 Weak transcription Aorta Aorta
9 chr5:36924800-36939000 Weak transcription Fetal Thymus thymus
10 chr5:36924800-36955200 Weak transcription Dnd41 blood
11 chr5:36925400-36933800 Enhancers Primary T helper cells fromperipheralblood blood
12 chr5:36925600-36935200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr5:36926000-36936800 Enhancers Primary T helper cells PMA-I stimulated --
14 chr5:36926600-36939400 Weak transcription Fetal Intestine Small intestine
15 chr5:36926800-36934200 Weak transcription Colon Smooth Muscle Colon
16 chr5:36927600-36961600 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr5:36928200-36935200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr5:36928200-36935400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr5:36928800-36933800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr5:36929000-36934800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr5:36929000-36938000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr5:36929600-36947400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr5:36929800-36937400 Weak transcription HSMM muscle
24 chr5:36929800-36939400 Weak transcription Osteobl bone
25 chr5:36930000-36937000 Weak transcription A549 lung
26 chr5:36930000-36938000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr5:36930000-36945000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr5:36930200-36934000 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr5:36930200-36934400 Weak transcription HUVEC blood vessel
30 chr5:36930600-36934400 Weak transcription Primary T cells from cord blood blood
31 chr5:36930600-36935000 Weak transcription Primary B cells from cord blood blood
32 chr5:36930800-36940000 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr5:36931200-36934000 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr5:36931200-36936600 Weak transcription Fetal Heart heart
35 chr5:36931200-36939400 Weak transcription Hela-S3 cervix
36 chr5:36931400-36933200 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr5:36931600-36933200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr5:36931800-36934600 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr5:36931800-36938000 Weak transcription Left Ventricle heart
40 chr5:36931800-36938200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr5:36931800-36938400 Weak transcription Ovary ovary
42 chr5:36932200-36940000 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr5:36932200-36940000 Weak transcription Brain Angular Gyrus brain
44 chr5:36932400-36943200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr5:36932600-36934000 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr5:36932800-36933200 Enhancers Liver Liver
47 chr5:36932800-36933200 Enhancers Psoas Muscle Psoas

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Last update: Aug 31, 2015