Variant report
Variant | esv14333 |
---|---|
Chromosome Location | chr14:43182920-43185287 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs557717221 | chr14:43184418-43184419 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs571460719 | chr14:43184435-43184436 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs550783717 | chr14:43184448-43184449 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs1630511 | chr14:43184455-43184456 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs530434118 | chr14:43184486-43184487 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs369819312 | chr14:43184507-43184508 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs74047792 | chr14:43184509-43184510 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs567151639 | chr14:43184510-43184511 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs35201686 | chr14:43184519-43184520 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs552591837 | chr14:43184576-43184577 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs570975480 | chr14:43184589-43184590 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs538315929 | chr14:43184616-43184617 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs10151562 | chr14:43184629-43184630 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
14 | rs1712697 | chr14:43184636-43184637 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
15 | rs74484414 | chr14:43184668-43184669 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs554592405 | chr14:43184678-43184679 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs556480602 | chr14:43184687-43184688 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs111475235 | chr14:43184726-43184727 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs573077134 | chr14:43184731-43184732 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs563170556 | chr14:43184744-43184745 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs74047793 | chr14:43184760-43184761 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs140397350 | chr14:43184775-43184776 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs190646363 | chr14:43184847-43184848 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs1698521 | chr14:43184855-43184856 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs372714427 | chr14:43184862-43184863 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs530277132 | chr14:43184888-43184889 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs181128137 | chr14:43184902-43184903 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs185619553 | chr14:43184925-43184926 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs149954638 | chr14:43184961-43184962 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs61992799 | chr14:43185084-43185085 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs552627524 | chr14:43185097-43185098 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs200827224 | chr14:43185138-43185139 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs570814692 | chr14:43185196-43185197 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs531725747 | chr14:43185234-43185235 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs550342550 | chr14:43185236-43185237 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs199526238 | chr14:43185252-43185253 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs146438065 | chr14:43185277-43185278 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Breast cancer | 17899364 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Wilms tumour | 21544195 | CNVD |
Burkitt''s lymphoma | 19759907 | CNVD |
Lung cancer | 18438408 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Prostate cancer | 18632612 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Breast cancer | 21858162 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Cancer | 21183584 | CNVD |
Thyroid cancer | 19470727 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Breast cancer | 21364760 | CNVD |
Schizophrenia | 23813976 | CNVD |
Immune disease | 21076436 | CNVD |
Immune disease | 21042300 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Glioblastoma multiforme | 21569311 | CNVD |
Schizophrenia | 20967226 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:43184400-43184600 | Enhancers | Muscle Satellite Cultured Cells | -- |
2 | chr14:43184400-43185000 | Enhancers | NHEK | skin |
3 | chr14:43184400-43185400 | Enhancers | HUVEC | blood vessel |
4 | chr14:43184600-43185000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |