The 2.0 version of rSNPBase

Variant report

Variant esv1452700
Chromosome Location chr19:21544922-21544934
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21542200-21547800 Weak transcription Spleen Spleen
2 chr19:21542400-21549000 Weak transcription A549 lung
3 chr19:21542400-21550200 Weak transcription Placenta Amnion Placenta Amnion
4 chr19:21542400-21550400 Weak transcription Lung lung
5 chr19:21542400-21555400 Weak transcription Brain Cingulate Gyrus brain
6 chr19:21542400-21555400 Weak transcription Psoas Muscle Psoas
7 chr19:21542400-21555600 Weak transcription Colonic Mucosa Colon
8 chr19:21542400-21557800 Weak transcription Gastric stomach
9 chr19:21542400-21562200 Weak transcription Colon Smooth Muscle Colon
10 chr19:21542400-21562200 Weak transcription Fetal Heart heart
11 chr19:21542400-21563200 Weak transcription Brain Substantia Nigra brain
12 chr19:21542600-21545200 Weak transcription Adipose Nuclei Adipose
13 chr19:21542600-21550400 Weak transcription Esophagus oesophagus
14 chr19:21542600-21550400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr19:21542600-21550400 Weak transcription Stomach Smooth Muscle stomach
16 chr19:21542600-21555000 Weak transcription Brain Hippocampus Middle brain
17 chr19:21542600-21555000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr19:21542600-21555000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr19:21542600-21555200 Weak transcription Brain Anterior Caudate brain
20 chr19:21542600-21555600 Weak transcription Rectal Smooth Muscle rectum
21 chr19:21542600-21561400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr19:21542600-21561400 Weak transcription Pancreas Pancrea
23 chr19:21542800-21545200 Weak transcription HSMMtube muscle
24 chr19:21542800-21548000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr19:21542800-21548400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr19:21542800-21550400 Weak transcription Aorta Aorta
27 chr19:21542800-21555000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr19:21542800-21561400 Weak transcription Right Ventricle heart
29 chr19:21543000-21545000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr19:21543000-21545000 Weak transcription NH-A brain
31 chr19:21543000-21545400 Transcr. at gene 5' and 3' Dnd41 blood
32 chr19:21543000-21548000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr19:21543000-21549200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr19:21543000-21549800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr19:21543000-21550400 Weak transcription Brain Angular Gyrus brain
36 chr19:21543000-21553200 Weak transcription Osteobl bone
37 chr19:21543000-21555600 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr19:21543000-21556600 Weak transcription HepG2 liver
39 chr19:21543000-21563000 Weak transcription NHLF lung
40 chr19:21543000-21566600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
41 chr19:21543000-21566800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr19:21543200-21545000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr19:21543200-21545400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr19:21543200-21545400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr19:21543200-21546800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr19:21543200-21548000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr19:21543200-21550000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr19:21543200-21555200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
49 chr19:21543200-21555400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr19:21543200-21555800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015