The 2.0 version of rSNPBase

Variant report

Variant esv1478428
Chromosome Location chr6:4992621-4992622
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:4982400-4995000 Weak transcription Stomach Smooth Muscle stomach
2 chr6:4982600-4995000 Weak transcription Fetal Thymus thymus
3 chr6:4983000-4997600 Weak transcription Psoas Muscle Psoas
4 chr6:4984200-4994800 Weak transcription HepG2 liver
5 chr6:4985200-4995600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:4985600-4993400 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr6:4985600-4994000 Weak transcription Fetal Muscle Leg muscle
8 chr6:4985600-4997000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr6:4985600-4997000 Weak transcription Gastric stomach
10 chr6:4985600-5001000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr6:4985600-5003000 Weak transcription HUVEC blood vessel
12 chr6:4985600-5003200 Weak transcription Hela-S3 cervix
13 chr6:4985800-4994600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:4985800-4994800 Weak transcription Esophagus oesophagus
15 chr6:4985800-5003600 Weak transcription H9 Cell Line embryonic stem cell
16 chr6:4987600-5003000 Weak transcription GM12878-XiMat blood
17 chr6:4987600-5003600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr6:4988000-5001400 Weak transcription NHEK skin
19 chr6:4988200-4994800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr6:4988200-4994800 Weak transcription Brain Substantia Nigra brain
21 chr6:4988200-5003600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr6:4988800-4994600 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr6:4988800-4995200 Weak transcription Primary B cells from cord blood blood
24 chr6:4988800-5001200 Weak transcription Brain Hippocampus Middle brain
25 chr6:4988800-5001200 Weak transcription K562 blood
26 chr6:4988800-5003600 Weak transcription HMEC breast
27 chr6:4989000-4994600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr6:4989000-4995000 Weak transcription Brain Inferior Temporal Lobe brain
29 chr6:4989200-5003600 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr6:4989400-4994800 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr6:4989400-4995800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr6:4989600-4995600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr6:4989800-4994800 Weak transcription Adipose Nuclei Adipose
34 chr6:4990000-4994800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr6:4990000-4996200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:4990000-5003600 Weak transcription Fetal Lung lung
37 chr6:4990200-4994600 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr6:4990200-4995000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr6:4990200-5001200 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr6:4990400-4994800 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr6:4990400-5001200 Weak transcription A549 lung
42 chr6:4990400-5003600 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr6:4990400-5003600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr6:4990600-4993200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr6:4990600-4994000 Weak transcription Left Ventricle heart
46 chr6:4990600-4995000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr6:4990600-4996400 Weak transcription Ovary ovary
48 chr6:4990600-4996600 Weak transcription Thymus Thymus
49 chr6:4990800-5003000 Weak transcription Fetal Heart heart
50 chr6:4990800-5003600 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015