Variant report
Variant | esv14848 |
---|---|
Chromosome Location | chr14:20524593-20528461 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:9)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:9 , 50 per page) page:
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No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | CEBPB | chr14:20524789-20524910 | A549 | lung: | n/a | n/a |
2 | FOS | chr14:20524680-20525089 | MCF10A-Er-Src | breast: | n/a | n/a |
3 | FOS | chr14:20524678-20525025 | MCF10A-Er-Src | breast: | n/a | n/a |
4 | FOS | chr14:20524679-20525000 | MCF10A-Er-Src | breast: | n/a | n/a |
5 | FOS | chr14:20524708-20524991 | MCF10A-Er-Src | breast: | n/a | n/a |
6 | STAT3 | chr14:20524659-20525098 | MCF10A-Er-Src | breast: | n/a | n/a |
7 | STAT3 | chr14:20524722-20524931 | MCF10A-Er-Src | breast: | n/a | n/a |
8 | STAT3 | chr14:20524676-20524878 | MCF10A-Er-Src | breast: | n/a | n/a |
9 | UBTF | chr14:20525966-20525982 | K562 | blood: | n/a | n/a |
No data |
(count:1 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:20518924..20521802-chr14:20525808..20527615,2 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
OR4L1 | TF binding region |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs560338073 | chr14:20524691-20524692 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs192489768 | chr14:20524735-20524736 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs1959633 | chr14:20524742-20524743 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
4 | rs75596279 | chr14:20524789-20524790 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs531482525 | chr14:20524798-20524799 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs141399676 | chr14:20524823-20524824 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs568041852 | chr14:20524877-20524878 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs535069247 | chr14:20524879-20524880 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs377442182 | chr14:20524880-20524881 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs547469202 | chr14:20524888-20524889 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs74037205 | chr14:20524931-20524932 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs534406048 | chr14:20524936-20524937 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs559178164 | chr14:20524941-20524942 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs373628518 | chr14:20524944-20524945 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs116405648 | chr14:20524954-20524955 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs72669021 | chr14:20524956-20524957 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
17 | rs556323458 | chr14:20524958-20524959 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs183777193 | chr14:20524968-20524969 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs2994416 | chr14:20524976-20524977 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
20 | rs187991448 | chr14:20524977-20524978 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs76316569 | chr14:20524979-20524980 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs202121196 | chr14:20524985-20524986 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs147005318 | chr14:20525006-20525007 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs2994415 | chr14:20525016-20525017 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
25 | rs192393595 | chr14:20525032-20525033 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs116738763 | chr14:20525059-20525060 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs145118554 | chr14:20525066-20525067 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs72669022 | chr14:20525093-20525094 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
29 | rs180850042 | chr14:20525979-20525980 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs35495025 | chr14:20525981-20525982 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 20164920 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cone-rod dystrophy | 18421352 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Breast cancer | 17899364 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Alzheimer''s disease | 21482944 | CNVD |
Mental retardation | 19951919 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Heart disease | 21282601 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Lung cancer | 16773561 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Cancer | 17440070 | CNVD |
Breast cancer | 16272173 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Epilepsy | 20736978 | CNVD |
Mental retardation | 20736978 | CNVD |
severe speech impairment | 20736978 | CNVD |
speech impairment | 20736978 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Breast cancer | 21364760 | CNVD |
Prostate cancer | 18632612 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Breast cancer | 21509527 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 22522925 | CNVD |