Variant report
Variant | esv15382 |
---|---|
Chromosome Location | chr22:23803474-23829377 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:419)
- CpG islands (count:122)
- Chromatin interactive region (count:3)
- LncRNA region (count:9)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:23810108-23810480 | HepG2 | liver: | n/a | n/a |
2 | BATF | chr22:23828883-23829053 | GM12878 | blood: | n/a | n/a |
3 | BATF | chr22:23827789-23828067 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr22:23819974-23820417 | GM12878 | blood: | n/a | n/a |
5 | BATF | chr22:23817542-23817698 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr22:23814219-23814432 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:23815225-23815371 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:23827783-23828060 | GM12878 | blood: | n/a | n/a |
9 | BCL11A | chr22:23820122-23820430 | GM12878 | blood: | n/a | n/a |
10 | BCL11A | chr22:23814300-23814538 | GM12878 | blood: | n/a | n/a |
11 | BCL11A | chr22:23819918-23820441 | GM12878 | blood: | n/a | n/a |
12 | BCL11A | chr22:23827775-23828065 | GM12878 | blood: | n/a | n/a |
13 | BCL11A | chr22:23828873-23829061 | GM12878 | blood: | n/a | n/a |
14 | BCL11A | chr22:23814796-23814963 | GM12878 | blood: | n/a | n/a |
15 | BCL11A | chr22:23827797-23828034 | GM12878 | blood: | n/a | n/a |
16 | BHLHE40 | chr22:23810980-23811147 | HepG2 | liver: | n/a | n/a |
17 | BHLHE40 | chr22:23828739-23829217 | HepG2 | liver: | n/a | n/a |
18 | BHLHE40 | chr22:23810674-23810961 | HepG2 | liver: | n/a | n/a |
19 | BHLHE40 | chr22:23810125-23810453 | HepG2 | liver: | n/a | n/a |
20 | BHLHE40 | chr22:23810151-23810450 | HepG2 | liver: | n/a | n/a |
21 | BHLHE40 | chr22:23827779-23827957 | HepG2 | liver: | n/a | n/a |
22 | CEBPB | chr22:23805382-23805445 | H1-hESC | embryonic stem cell: | n/a | n/a |
23 | CEBPB | chr22:23814003-23814182 | HepG2 | liver: | n/a | n/a |
24 | CEBPB | chr22:23817889-23818034 | HepG2 | liver: | n/a | chr22:23817946-23817957 |
25 | CHD2 | chr22:23825339-23825347 | GM12878 | blood: | n/a | n/a |
26 | CTCF | chr22:23827868-23828006 | Kidney_OC | kidney: | n/a | n/a |
27 | CTCF | chr22:23827839-23827856 | Pancreas_OC | pancreas: | n/a | n/a |
28 | CTCF | chr22:23827867-23828004 | GM10266 | blood: | n/a | n/a |
29 | CTCF | chr22:23827860-23827974 | Gliobla | brain: | n/a | n/a |
30 | CTCF | chr22:23828965-23829012 | GM20000 | blood: | n/a | n/a |
31 | CTCF | chr22:23827867-23828014 | GM10248 | blood: | n/a | n/a |
32 | CTCF | chr22:23827858-23827957 | GM19239 | blood: | n/a | n/a |
33 | CTCF | chr22:23828955-23829079 | LNCaP | prostate: | n/a | n/a |
34 | CTCF | chr22:23810440-23810590 | HPAF | blood vessel: | n/a | n/a |
35 | CTCF | chr22:23827869-23828003 | Medullo | brain: | n/a | n/a |
36 | CTCF | chr22:23827801-23827897 | MCF-7 | breast: | n/a | n/a |
37 | CTCF | chr22:23828961-23829054 | GM10266 | blood: | n/a | n/a |
38 | CTCF | chr22:23828908-23829070 | GM10248 | blood: | n/a | n/a |
39 | CTCF | chr22:23827859-23827896 | H1-hESC | embryonic stem cell: | n/a | n/a |
40 | CTCF | chr22:23827856-23827895 | MCF-7 | breast: | n/a | n/a |
41 | CTCF | chr22:23827867-23828013 | LNCaP | prostate: | n/a | n/a |
42 | CTCF | chr22:23827861-23827946 | GM12891 | blood: | n/a | n/a |
43 | CTCF | chr22:23827837-23827917 | A549 | lung: | n/a | n/a |
44 | CTCF | chr22:23828962-23829049 | LNCaP | prostate: | n/a | n/a |
45 | CTCF | chr22:23827834-23827853 | MCF-7 | breast: | n/a | n/a |
46 | CTCF | chr22:23809394-23809477 | MCF-7 | breast: | n/a | chr22:23809436-23809457 chr22:23809434-23809452 |
47 | CTCF | chr22:23809429-23809445 | Hela-S3 | cervix: | n/a | n/a |
48 | CTCF | chr22:23828955-23829077 | Medullo | brain: | n/a | n/a |
49 | CTCF | chr22:23827858-23827895 | GM12892 | blood: | n/a | n/a |
50 | CTCF | chr22:23809426-23809441 | MCF-7 | breast: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:23804719-23804769 | HCM | heart: | n/a |
2 | chr22:23805705-23805755 | SKMC | muscle: | n/a |
3 | chr22:23805705-23805755 | SK-N-SH_RA | brain: | n/a |
4 | chr22:23804719-23804769 | GM12891 | blood: | n/a |
5 | chr22:23804719-23804769 | HRPEpiC | eye: | n/a |
6 | chr22:23805705-23805755 | ProgFib | skin: | n/a |
7 | chr22:23804719-23804769 | NHBE | bronchial: | n/a |
8 | chr22:23805705-23805755 | SK-N-SH | brain: | n/a |
9 | chr22:23805705-23805755 | AG04449 | skin: | fetal |
10 | chr22:23805705-23805755 | Jurkat | blood: | n/a |
11 | chr22:23804719-23804769 | HAEpiC | amniotic membrane: | n/a |
12 | chr22:23804719-23804769 | NHDF-neo | bronchial: | n/a |
13 | chr22:23804719-23804769 | SAEC | small airway: | n/a |
14 | chr22:23804719-23804769 | H1-hESC | embryonic stem cell: | embryo |
15 | chr22:23804719-23804769 | GM19239 | blood: | n/a |
16 | chr22:23804719-23804769 | BJ | skin: | n/a |
17 | chr22:23805705-23805755 | MCF10A-Er-Src | breast: | n/a |
18 | chr22:23804719-23804769 | PFSK-1 | brain: | n/a |
19 | chr22:23805705-23805755 | HCT-116 | colon: | n/a |
20 | chr22:23805705-23805755 | HL-60 | blood: | n/a |
21 | chr22:23805705-23805755 | AoSMC | blood vessel: | n/a |
22 | chr22:23804719-23804769 | HEK293 | kidney: | embryo |
23 | chr22:23804719-23804769 | GM06990 | blood: | n/a |
24 | chr22:23805705-23805755 | GM12892 | blood: | n/a |
25 | chr22:23804719-23804769 | SK-N-SH | brain: | n/a |
26 | chr22:23805705-23805755 | K562 | blood: | n/a |
27 | chr22:23805705-23805755 | IMR90 | lung: | fetal |
28 | chr22:23804719-23804769 | HRCEpiC | kidney: | n/a |
29 | chr22:23805705-23805755 | T-47D | breast: | n/a |
30 | chr22:23805705-23805755 | NHBE | bronchial: | n/a |
31 | chr22:23805705-23805755 | NT2-D1 | testis: | n/a |
32 | chr22:23805705-23805755 | PFSK-1 | brain: | n/a |
33 | chr22:23805705-23805755 | Hela-S3 | cervix: | n/a |
34 | chr22:23804719-23804769 | AG04449 | skin: | fetal |
35 | chr22:23805705-23805755 | CMK | blood: | n/a |
36 | chr22:23805705-23805755 | PANC-1 | pancreas: | n/a |
37 | chr22:23804719-23804769 | HPAEpiC | pulmonary alveolar: | n/a |
38 | chr22:23804719-23804769 | A549 | lung: | n/a |
39 | chr22:23805705-23805755 | AG09309 | skin: | n/a |
40 | chr22:23804719-23804769 | MCF-7 | breast: | n/a |
41 | chr22:23804719-23804769 | CMK | blood: | n/a |
42 | chr22:23805705-23805755 | RPTEC | kidney: | n/a |
43 | chr22:23804719-23804769 | AG04450 | lung: | fetal |
44 | chr22:23804719-23804769 | HMEC | breast: | n/a |
45 | chr22:23804719-23804769 | ProgFib | skin: | n/a |
46 | chr22:23805705-23805755 | HRE | kidney: | n/a |
47 | chr22:23804719-23804769 | GM12878 | blood: | n/a |
48 | chr22:23805705-23805755 | GM12878 | blood: | n/a |
49 | chr22:23805705-23805755 | HUVEC | blood vessel: | n/a |
50 | chr22:23805705-23805755 | GM12891 | blood: | n/a |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-IGLL1-2 | chr22:23829066-23829093 | ENSG00000178248 |
2 | lnc-IGLL1-2 | chr22:23815565-23815598 | ENSG00000178248 |
3 | lnc-IGLL1-2 | chr22:23822604-23822687 | ENSG00000178248 |
4 | lnc-IGLL1-2 | chr22:23816064-23816125 | ENSG00000178248 |
5 | lnc-IGLL1-2 | chr22:23812181-23812224 | ENSG00000178248 |
6 | lnc-IGLL1-2 | chr22:23812502-23812523 | ENSG00000178248 |
7 | lnc-IGLL1-2 | chr22:23825255-23825313 | ENSG00000178248 |
8 | lnc-IGLL1-2 | chr22:23824762-23824792 | ENSG00000178248 |
9 | lnc-IGLL1-2 | chr22:23812995-23813350 | ENSG00000178248 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000178248 | TF binding region |
ENSG00000178248 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs564267748 | chr22:23803481-23803482 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs35442368 | chr22:23803500-23803501 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs533098722 | chr22:23803532-23803533 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs550008316 | chr22:23803545-23803546 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs563335756 | chr22:23803569-23803570 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs2000462 | chr22:23803608-23803609 | Weak transcription Enhancers Genic enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
7 | rs536706882 | chr22:23803638-23803639 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs2000463 | chr22:23803722-23803723 | Weak transcription Enhancers Genic enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
9 | rs565654530 | chr22:23803733-23803734 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs372898106 | chr22:23803760-23803761 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs113882814 | chr22:23803765-23803766 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs534361231 | chr22:23803828-23803829 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs568437575 | chr22:23803947-23803948 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs7288974 | chr22:23803972-23803973 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs8139466 | chr22:23804031-23804032 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs539983094 | chr22:23804068-23804069 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs376595237 | chr22:23804106-23804107 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs141172462 | chr22:23804140-23804141 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs535534981 | chr22:23804163-23804164 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs182233483 | chr22:23804172-23804173 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs186842464 | chr22:23804206-23804207 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs34225947 | chr22:23804247-23804248 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs576673987 | chr22:23804250-23804251 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs398061844 | chr22:23804251-23804252 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs61746804 | chr22:23804282-23804283 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs146930734 | chr22:23804292-23804293 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs577874306 | chr22:23804296-23804297 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs6003726 | chr22:23804301-23804302 | Weak transcription Enhancers Genic enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
29 | rs2032113 | chr22:23804307-23804308 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs529136275 | chr22:23804330-23804331 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs116393559 | chr22:23804366-23804367 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs192908705 | chr22:23804391-23804392 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs138042737 | chr22:23804418-23804419 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs139977533 | chr22:23804448-23804449 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs12172378 | chr22:23804461-23804462 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs540710013 | chr22:23804468-23804469 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs66484316 | chr22:23804469-23804470 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs150144174 | chr22:23804470-23804471 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs12159447 | chr22:23804487-23804488 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs113840972 | chr22:23804490-23804491 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs12172379 | chr22:23804507-23804508 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs71865791 | chr22:23804527-23804528 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs12168756 | chr22:23804528-23804529 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs184909461 | chr22:23804549-23804550 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs12168433 | chr22:23804558-23804559 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs112509734 | chr22:23804585-23804586 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs188568742 | chr22:23804598-23804599 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs533469669 | chr22:23804606-23804607 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs186478000 | chr22:23804608-23804609 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs550090611 | chr22:23804614-23804615 | Weak transcription Enhancers Genic enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Breast cancer | 21858162 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Medullary thyroid carcinoma | 18765511 | CNVD |
Lung cancer | 18438408 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Schizophrenia | 17989066 | CNVD |
Cancer | 20164919 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Li-fraumeni syndrome | 18685109 | CNVD |
Breast cancer | 20409316 | CNVD |
Esophageal adenocarcinoma | 18820669 | CNVD |
Cancer | 19424424 | CNVD |
Non-syndromic sensorineural hearing loss | 17289997 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Breast cancer | 22522925 | CNVD |
abnormal development | 18461090 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:23792800-23812800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
2 | chr22:23798000-23804600 | Enhancers | Primary hematopoietic stem cells | blood |
3 | chr22:23798200-23804800 | Enhancers | Fetal Thymus | thymus |
4 | chr22:23799800-23804200 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
5 | chr22:23800400-23815200 | Weak transcription | Primary B cells from cord blood | blood |
6 | chr22:23801600-23806800 | Weak transcription | Ovary | ovary |
7 | chr22:23803000-23804600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
8 | chr22:23803000-23805600 | Weak transcription | Fetal Intestine Large | intestine |
9 | chr22:23803000-23806000 | Weak transcription | Fetal Intestine Small | intestine |
10 | chr22:23803200-23806800 | Weak transcription | Thymus | Thymus |
11 | chr22:23803400-23803600 | Enhancers | Dnd41 | blood |
12 | chr22:23803600-23805000 | Genic enhancers | Dnd41 | blood |
13 | chr22:23804800-23806400 | Weak transcription | Fetal Thymus | thymus |
14 | chr22:23805000-23805600 | Strong transcription | Dnd41 | blood |
15 | chr22:23805000-23805800 | Bivalent Enhancer | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
16 | chr22:23805600-23806000 | Weak transcription | Dnd41 | blood |
17 | chr22:23806000-23808600 | Enhancers | Dnd41 | blood |
18 | chr22:23806400-23807200 | Enhancers | Fetal Thymus | thymus |
19 | chr22:23806800-23807000 | Enhancers | Ovary | ovary |
20 | chr22:23806800-23807000 | Enhancers | Thymus | Thymus |
21 | chr22:23807000-23808200 | Weak transcription | Ovary | ovary |
22 | chr22:23807200-23808000 | Weak transcription | Fetal Thymus | thymus |
23 | chr22:23808000-23808800 | Enhancers | Fetal Thymus | thymus |
24 | chr22:23808800-23813000 | Weak transcription | A549 | lung |
25 | chr22:23809400-23810600 | Enhancers | HepG2 | liver |
26 | chr22:23812200-23812400 | Enhancers | HepG2 | liver |
27 | chr22:23812800-23813000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
28 | chr22:23813000-23814400 | Enhancers | HepG2 | liver |
29 | chr22:23813200-23813400 | Enhancers | A549 | lung |
30 | chr22:23813400-23814000 | Enhancers | Fetal Brain Male | brain |
31 | chr22:23813800-23814200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
32 | chr22:23814000-23815600 | Enhancers | Primary B cells from peripheral blood | blood |
33 | chr22:23814000-23815600 | Weak transcription | Fetal Brain Male | brain |
34 | chr22:23814200-23815400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
35 | chr22:23815200-23815400 | Enhancers | Primary B cells from cord blood | blood |
36 | chr22:23815400-23817000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
37 | chr22:23815600-23816400 | Enhancers | Fetal Brain Male | brain |
38 | chr22:23816000-23816200 | Enhancers | Brain Cingulate Gyrus | brain |
39 | chr22:23816000-23817200 | Enhancers | Brain Germinal Matrix | brain |
40 | chr22:23816200-23817000 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
41 | chr22:23816200-23817000 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
42 | chr22:23816200-23817000 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
43 | chr22:23816200-23817000 | Enhancers | Brain Inferior Temporal Lobe | brain |
44 | chr22:23819600-23821400 | Enhancers | Dnd41 | blood |
45 | chr22:23820400-23820600 | Enhancers | Small Intestine | intestine |
46 | chr22:23820400-23820800 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
47 | chr22:23820400-23820800 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
48 | chr22:23820600-23821200 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
49 | chr22:23821400-23825200 | Weak transcription | Dnd41 | blood |
50 | chr22:23823600-23824200 | Enhancers | Fetal Thymus | thymus |