The 2.0 version of rSNPBase

Variant report

Variant esv1576498
Chromosome Location chr6:29703129-29703139
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29692200-29715800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr6:29692400-29715800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr6:29692800-29712000 Weak transcription H9 Cell Line embryonic stem cell
4 chr6:29693200-29711400 Weak transcription Pancreas Pancrea
5 chr6:29693400-29715600 Weak transcription Esophagus oesophagus
6 chr6:29693600-29715600 Weak transcription NHLF lung
7 chr6:29693800-29705400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr6:29693800-29715400 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr6:29693800-29716000 Weak transcription Small Intestine intestine
10 chr6:29694000-29707000 Weak transcription Rectal Smooth Muscle rectum
11 chr6:29694000-29711200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr6:29694000-29711400 Weak transcription Gastric stomach
13 chr6:29694000-29712200 Weak transcription Aorta Aorta
14 chr6:29694000-29715600 Weak transcription Colon Smooth Muscle Colon
15 chr6:29694200-29705600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr6:29696000-29705600 Weak transcription Right Ventricle heart
17 chr6:29696000-29715600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr6:29696000-29715600 Weak transcription Ovary ovary
19 chr6:29696200-29703800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr6:29696200-29703800 Weak transcription Left Ventricle heart
21 chr6:29696200-29705600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr6:29696200-29705800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr6:29696200-29711800 Weak transcription Adipose Nuclei Adipose
24 chr6:29696200-29715200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr6:29696200-29715600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr6:29696200-29715600 Weak transcription Liver Liver
27 chr6:29696400-29710800 Weak transcription Lung lung
28 chr6:29696400-29711400 Weak transcription Spleen Spleen
29 chr6:29696400-29711800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr6:29696400-29712000 Weak transcription Duodenum Mucosa Duodenum
31 chr6:29696400-29715400 Weak transcription Stomach Smooth Muscle stomach
32 chr6:29696600-29715600 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr6:29696800-29714600 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr6:29696800-29715800 Weak transcription Colonic Mucosa Colon
35 chr6:29699200-29712400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr6:29700000-29715200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr6:29700600-29711600 Weak transcription Placenta Amnion Placenta Amnion
38 chr6:29702000-29711200 Weak transcription Primary T cells fromperipheralblood blood
39 chr6:29702000-29711600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr6:29702200-29705400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr6:29702400-29705600 Weak transcription NHDF-Ad bronchial
42 chr6:29702400-29709800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr6:29702400-29715400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr6:29702600-29707200 Weak transcription NHEK skin
45 chr6:29702600-29715400 Weak transcription Primary monocytes fromperipheralblood blood
46 chr6:29702800-29703600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:29702800-29705600 Weak transcription HMEC breast
48 chr6:29702800-29712000 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr6:29702800-29712800 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr6:29702800-29713800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015