The 2.0 version of rSNPBase

Variant report

Variant esv1597078
Chromosome Location chr13:50122088-50122091
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50075000-50143800 Weak transcription Small Intestine intestine
2 chr13:50088400-50151000 Weak transcription Psoas Muscle Psoas
3 chr13:50088600-50134200 Weak transcription Stomach Mucosa stomach
4 chr13:50090000-50122800 Weak transcription Ovary ovary
5 chr13:50090000-50123600 Weak transcription Esophagus oesophagus
6 chr13:50091400-50138800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr13:50094600-50141600 Weak transcription Right Ventricle heart
8 chr13:50097800-50135000 Weak transcription Colonic Mucosa Colon
9 chr13:50101600-50142800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr13:50104600-50143800 Weak transcription Hela-S3 cervix
11 chr13:50106600-50133200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr13:50108600-50158800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr13:50110400-50134400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr13:50110600-50124800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr13:50110800-50126800 Strong transcription iPS-20b Cell Line embryonic stem cell
16 chr13:50111400-50127600 Weak transcription Fetal Heart heart
17 chr13:50111600-50136600 Strong transcription Dnd41 blood
18 chr13:50111800-50133200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr13:50112000-50135000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr13:50112200-50134200 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr13:50112200-50138400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr13:50113200-50127200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr13:50113600-50123400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr13:50114000-50125800 Strong transcription Stomach Smooth Muscle stomach
25 chr13:50114000-50126600 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr13:50115000-50123400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr13:50115000-50123400 Weak transcription NHLF lung
28 chr13:50115000-50123600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr13:50115000-50123800 Weak transcription H9 Cell Line embryonic stem cell
30 chr13:50115000-50132200 Weak transcription Colon Smooth Muscle Colon
31 chr13:50115000-50140400 Weak transcription Fetal Brain Male brain
32 chr13:50115200-50122600 Weak transcription Fetal Lung lung
33 chr13:50115200-50124600 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr13:50115200-50124800 Weak transcription Fetal Brain Female brain
35 chr13:50115200-50132800 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr13:50115200-50133200 Weak transcription Rectal Smooth Muscle rectum
37 chr13:50115200-50135000 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr13:50115200-50135600 Strong transcription Primary T cells fromperipheralblood blood
39 chr13:50115200-50140400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr13:50115400-50123400 Weak transcription Brain Inferior Temporal Lobe brain
41 chr13:50115400-50124000 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr13:50115400-50124400 Strong transcription Primary monocytes fromperipheralblood blood
43 chr13:50115400-50126200 Strong transcription HUES64 Cell Line embryonic stem cell
44 chr13:50115400-50130800 Weak transcription NH-A brain
45 chr13:50115400-50131200 Weak transcription HSMM muscle
46 chr13:50115400-50133200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr13:50115400-50141200 Weak transcription K562 blood
48 chr13:50115400-50143200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr13:50115600-50129200 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr13:50115600-50134800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015