The 2.0 version of rSNPBase

Variant report

Variant esv1611499
Chromosome Location chr18:39656081-39656083
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:39548400-39670000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr18:39578400-39663200 Weak transcription Fetal Heart heart
3 chr18:39581000-39666200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr18:39585000-39658600 Weak transcription Small Intestine intestine
5 chr18:39590600-39668000 Weak transcription Esophagus oesophagus
6 chr18:39601600-39668200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr18:39612200-39666400 Weak transcription Gastric stomach
8 chr18:39612200-39669800 Weak transcription Fetal Stomach stomach
9 chr18:39612200-39670000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr18:39615400-39663400 Weak transcription H9 Cell Line embryonic stem cell
11 chr18:39619200-39656400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr18:39619800-39662200 Weak transcription Right Ventricle heart
13 chr18:39620800-39664200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr18:39621200-39657200 Weak transcription Brain Cingulate Gyrus brain
15 chr18:39628600-39666200 Weak transcription A549 lung
16 chr18:39630600-39658600 Weak transcription Hela-S3 cervix
17 chr18:39631200-39659800 Weak transcription Fetal Brain Male brain
18 chr18:39634800-39674600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr18:39639400-39664000 Weak transcription K562 blood
20 chr18:39644200-39674800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr18:39644400-39656800 Weak transcription HUVEC blood vessel
22 chr18:39644600-39665000 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr18:39644800-39660200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr18:39644800-39662800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr18:39644800-39664200 Strong transcription Liver Liver
26 chr18:39644800-39665000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr18:39645000-39664000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr18:39648000-39657400 Weak transcription Rectal Smooth Muscle rectum
29 chr18:39648000-39661200 Weak transcription HMEC breast
30 chr18:39648200-39656400 Weak transcription Duodenum Mucosa Duodenum
31 chr18:39648200-39657000 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr18:39648200-39657200 Weak transcription Lung lung
33 chr18:39648200-39657200 Weak transcription Osteobl bone
34 chr18:39648200-39657600 Weak transcription Brain Anterior Caudate brain
35 chr18:39648200-39657800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr18:39648200-39662200 Weak transcription Psoas Muscle Psoas
37 chr18:39648200-39665400 Weak transcription Spleen Spleen
38 chr18:39648200-39666400 Weak transcription Thymus Thymus
39 chr18:39648200-39668200 Weak transcription Brain Angular Gyrus brain
40 chr18:39648400-39656400 Weak transcription Fetal Brain Female brain
41 chr18:39648400-39657000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr18:39648400-39657000 Weak transcription Brain Germinal Matrix brain
43 chr18:39648400-39657800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr18:39648400-39662200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr18:39648600-39658200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr18:39648800-39657200 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr18:39649200-39665600 Weak transcription HepG2 liver
48 chr18:39649200-39674600 Weak transcription Fetal Intestine Small intestine
49 chr18:39649600-39664400 Strong transcription HSMM muscle
50 chr18:39650000-39656400 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015