The 2.0 version of rSNPBase

Variant report

Variant esv1620938
Chromosome Location chr2:86976529-86976530
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86949000-86979600 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr2:86962200-86977000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr2:86965200-86978800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr2:86966800-86977200 Weak transcription Osteobl bone
5 chr2:86968600-86993000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr2:86968600-86997600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:86968800-86977000 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr2:86968800-86977000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr2:86968800-86978600 Weak transcription Placenta Placenta
10 chr2:86968800-86980400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr2:86969200-86977400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr2:86969200-86986400 Strong transcription Fetal Thymus thymus
13 chr2:86969200-86997800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:86969400-86979000 Weak transcription Ovary ovary
15 chr2:86969400-86984400 Weak transcription Fetal Heart heart
16 chr2:86969400-86997800 Weak transcription H9 Cell Line embryonic stem cell
17 chr2:86969600-86977200 Weak transcription Rectal Smooth Muscle rectum
18 chr2:86969600-86995400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:86969600-86995400 Weak transcription Esophagus oesophagus
20 chr2:86969800-86977200 Weak transcription Fetal Kidney kidney
21 chr2:86969800-86978600 Weak transcription HSMM muscle
22 chr2:86970000-86979800 Weak transcription Colonic Mucosa Colon
23 chr2:86970000-86980200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr2:86970000-87002000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr2:86970200-86976800 Strong transcription Primary hematopoietic stem cells short term culture blood
26 chr2:86970400-86980600 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr2:86970400-86995400 Weak transcription Aorta Aorta
28 chr2:86971600-86976600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr2:86971600-86977000 Weak transcription H1 Cell Line embryonic stem cell
30 chr2:86971600-86993000 Weak transcription Lung lung
31 chr2:86972000-86978400 Weak transcription Psoas Muscle Psoas
32 chr2:86972000-86978800 Weak transcription Left Ventricle heart
33 chr2:86972000-86979000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr2:86972000-86987600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:86972000-86993000 Weak transcription Right Ventricle heart
36 chr2:86972000-86993000 Weak transcription Spleen Spleen
37 chr2:86972000-86995400 Weak transcription Pancreas Pancrea
38 chr2:86973800-86976800 Weak transcription HepG2 liver
39 chr2:86973800-86980000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr2:86974200-86977400 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr2:86974200-87004200 Weak transcription Small Intestine intestine
42 chr2:86974400-86977000 Weak transcription Duodenum Mucosa Duodenum
43 chr2:86974400-86977400 Weak transcription Liver Liver
44 chr2:86974400-86978200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr2:86974400-86980400 ZNF genes & repeats Primary hematopoietic stem cells blood
46 chr2:86974600-86977200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr2:86974600-86977400 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr2:86974600-86977800 Weak transcription Fetal Lung lung
49 chr2:86974600-86979200 Weak transcription K562 blood
50 chr2:86974600-86987600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015