The 2.0 version of rSNPBase

Variant report

Variant esv1679599
Chromosome Location chr1:246006873-246006881
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:245974400-246020800 Weak transcription Fetal Intestine Small intestine
2 chr1:245986600-246021600 Weak transcription Fetal Stomach stomach
3 chr1:245986800-246014000 Weak transcription Primary T cells from cord blood blood
4 chr1:245987000-246015000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:245990800-246016600 Weak transcription Lung lung
6 chr1:245990800-246019000 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr1:245991000-246018000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:245991000-246045000 Weak transcription Spleen Spleen
9 chr1:245991200-246019200 Weak transcription Pancreas Pancrea
10 chr1:245994400-246018000 Weak transcription HepG2 liver
11 chr1:245996800-246021200 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:245997000-246015200 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:245997600-246023800 Weak transcription Ovary ovary
14 chr1:245998000-246020400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:245998200-246020800 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr1:245998400-246017600 Weak transcription Primary B cells from cord blood blood
17 chr1:245999400-246019200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr1:245999400-246024200 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr1:245999800-246038400 Weak transcription Aorta Aorta
20 chr1:246000200-246008800 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr1:246000200-246019200 Weak transcription Gastric stomach
22 chr1:246000200-246019200 Weak transcription NHLF lung
23 chr1:246000800-246019200 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr1:246001000-246008000 Weak transcription Adipose Nuclei Adipose
25 chr1:246001200-246023400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:246001800-246015000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:246001800-246016200 Weak transcription Osteobl bone
28 chr1:246001800-246016600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:246001800-246019200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr1:246001800-246019200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:246001800-246056800 Weak transcription Primary hematopoietic stem cells blood
32 chr1:246002200-246007000 Weak transcription K562 blood
33 chr1:246005200-246007800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:246006000-246012400 Weak transcription HUVEC blood vessel
35 chr1:246006200-246007000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:246006600-246007000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:246006600-246011600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:246006600-246021800 Weak transcription Fetal Muscle Leg muscle
39 chr1:246006800-246041200 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015