Variant report

Variant	esv17013
Chromosome Location	chr1:155227059-155262674
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2245)
CpG islands
(count:3851)
Chromatin interactive
region (count:101)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2245 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:155248228-155248377	HepG2	liver:	n/a	n/a
2	ARID3A	chr1:155242526-155242891	HepG2	liver:	n/a	n/a
3	ARID3A	chr1:155246963-155247163	K562	blood:	n/a	chr1:155247001-155247009
4	ATF1	chr1:155232005-155232497	K562	blood:	n/a	n/a
5	ATF2	chr1:155243128-155243632	GM12878	blood:	n/a	n/a
6	ATF2	chr1:155231632-155232515	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr1:155248006-155248430	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr1:155231692-155232557	GM12878	blood:	n/a	n/a
9	ATF2	chr1:155231755-155232447	GM12878	blood:	n/a	n/a
10	ATF2	chr1:155231400-155232569	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF3	chr1:155231892-155232401	GM12878	blood:	n/a	n/a
12	ATF3	chr1:155231883-155232344	K562	blood:	n/a	n/a
13	ATF3	chr1:155231788-155232514	A549	lung:	n/a	n/a
14	ATF3	chr1:155231910-155232397	A549	lung:	n/a	n/a
15	ATF3	chr1:155231975-155232320	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF3	chr1:155231870-155232433	HepG2	liver:	n/a	n/a
17	ATF3	chr1:155243255-155243500	K562	blood:	n/a	n/a
18	ATF3	chr1:155242887-155243147	K562	blood:	n/a	chr1:155242939-155242948
19	ATF3	chr1:155231901-155232312	GM12878	blood:	n/a	n/a
20	ATF3	chr1:155231954-155232359	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF3	chr1:155231964-155232324	HepG2	liver:	n/a	n/a
22	BACH1	chr1:155248247-155248681	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr1:155231797-155232395	H1-hESC	embryonic stem cell:	n/a	n/a
24	BCL11A	chr1:155231786-155232369	GM12878	blood:	n/a	n/a
25	BCL3	chr1:155231841-155232446	GM12878	blood:	n/a	n/a
26	BCL3	chr1:155231702-155232575	GM12878	blood:	n/a	n/a
27	BCL3	chr1:155231466-155232675	A549	lung:	n/a	n/a
28	BCL3	chr1:155231508-155232723	A549	lung:	n/a	n/a
29	BCLAF1	chr1:155231788-155232482	GM12878	blood:	n/a	n/a
30	BCLAF1	chr1:155231614-155232587	GM12878	blood:	n/a	n/a
31	BCLAF1	chr1:155242569-155243628	GM12878	blood:	n/a	chr1:155242936-155242949 chr1:155243259-155243268 chr1:155243265-155243274 chr1:155243262-155243275 chr1:155243334-155243343 chr1:155243262-155243271 chr1:155243263-155243276
32	BHLHE40	chr1:155231783-155232536	K562	blood:	n/a	n/a
33	BHLHE40	chr1:155231854-155232522	GM12878	blood:	n/a	n/a
34	BHLHE40	chr1:155242894-155243562	GM12878	blood:	n/a	chr1:155243262-155243278 chr1:155243207-155243223
35	BHLHE40	chr1:155248153-155248447	K562	blood:	n/a	n/a
36	BHLHE40	chr1:155246846-155247175	K562	blood:	n/a	n/a
37	BHLHE40	chr1:155242918-155243541	HepG2	liver:	n/a	chr1:155243262-155243278 chr1:155243207-155243223
38	BHLHE40	chr1:155231906-155232417	HepG2	liver:	n/a	n/a
39	BHLHE40	chr1:155247027-155247464	GM12878	blood:	n/a	n/a
40	BHLHE40	chr1:155242737-155243763	K562	blood:	n/a	chr1:155243262-155243278 chr1:155243207-155243223
41	BRCA1	chr1:155231879-155232504	Hela-S3	cervix:	n/a	n/a
42	BRCA1	chr1:155231915-155232433	HepG2	liver:	n/a	n/a
43	BRCA1	chr1:155246928-155247180	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr1:155231953-155232468	H1-hESC	embryonic stem cell:	n/a	n/a
45	BRCA1	chr1:155231476-155231482	GM12878	blood:	n/a	n/a
46	BRCA1	chr1:155232049-155232464	GM12878	blood:	n/a	n/a
47	BRCA1	chr1:155256725-155256731	HepG2	liver:	n/a	n/a
48	BRCA1	chr1:155242480-155242625	GM12878	blood:	n/a	n/a
49	BRCA1	chr1:155243217-155243527	Hela-S3	cervix:	n/a	n/a
50	CBX3	chr1:155247942-155248454	K562	blood:	n/a	n/a

(count:3851 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:155247091-155247141	AoSMC	blood vessel:	n/a
2	chr1:155252776-155252826	ECC-1	luminal epithelium:	n/a
3	chr1:155247476-155247526	LNCaP	prostate:	n/a
4	chr1:155247191-155247241	SK-N-SH_RA	brain:	n/a
5	chr1:155247361-155247411	HPAEpiC	pulmonary alveolar:	n/a
6	chr1:155247214-155247264	BJ	skin:	n/a
7	chr1:155232292-155232342	GM19239	blood:	n/a
8	chr1:155243354-155243404	SK-N-SH_RA	brain:	n/a
9	chr1:155247091-155247141	AoSMC	blood vessel:	n/a
10	chr1:155252776-155252826	ECC-1	luminal epithelium:	n/a
11	chr1:155247476-155247526	LNCaP	prostate:	n/a
12	chr1:155247191-155247241	SK-N-SH_RA	brain:	n/a
13	chr1:155247361-155247411	HPAEpiC	pulmonary alveolar:	n/a
14	chr1:155247214-155247264	BJ	skin:	n/a
15	chr1:155232292-155232342	GM19239	blood:	n/a
16	chr1:155243354-155243404	SK-N-SH_RA	brain:	n/a
17	chr1:155247706-155247756	NHBE	bronchial:	n/a
18	chr1:155247785-155247835	NH-A	brain:	n/a
19	chr1:155243300-155243350	SK-N-MC	brain:	n/a
20	chr1:155240680-155240730	SK-N-SH_RA	brain:	n/a
21	chr1:155233051-155233101	HRE	kidney:	n/a
22	chr1:155248588-155248638	SK-N-MC	brain:	n/a
23	chr1:155231827-155231877	GM12891	blood:	n/a
24	chr1:155232251-155232301	NHBE	bronchial:	n/a
25	chr1:155232042-155232092	HCPEpiC	choroid plexus:	n/a
26	chr1:155242321-155242371	PrEC	prostate:	n/a
27	chr1:155247706-155247756	T-47D	breast:	n/a
28	chr1:155232925-155232975	CMK	blood:	n/a
29	chr1:155243807-155243857	BE2_C	brain:	n/a
30	chr1:155247117-155247167	SK-N-MC	brain:	n/a
31	chr1:155247785-155247835	Caco-2	colon:	n/a
32	chr1:155261708-155261758	AG10803	skin:	n/a
33	chr1:155243807-155243857	H1-hESC	embryonic stem cell:	embryo
34	chr1:155247117-155247167	HNPCEpiC	eye:	n/a
35	chr1:155239301-155239351	AoSMC	blood vessel:	n/a
36	chr1:155243476-155243526	HEK293	kidney:	embryo
37	chr1:155242321-155242371	AG09319	gingival:	n/a
38	chr1:155247361-155247411	SK-N-SH_RA	brain:	n/a
39	chr1:155232677-155232727	HCF	heart:	n/a
40	chr1:155248588-155248638	BJ	skin:	n/a
41	chr1:155247091-155247141	NHDF-neo	bronchial:	n/a
42	chr1:155232311-155232361	HL-60	blood:	n/a
43	chr1:155236380-155236430	GM12891	blood:	n/a
44	chr1:155232042-155232092	ovcar-3	ovarian:	n/a
45	chr1:155233051-155233101	HPAEpiC	pulmonary alveolar:	n/a
46	chr1:155247191-155247241	NB4	blood:	n/a
47	chr1:155247117-155247167	HAEpiC	amniotic membrane:	n/a
48	chr1:155232251-155232301	LNCaP	prostate:	n/a
49	chr1:155252359-155252409	NHDF-neo	bronchial:	n/a
50	chr1:155242321-155242371	RPTEC	kidney:	n/a

(count:101 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr1:155242307..155246012-chr1:155257653..155260333,3	MCF-7	breast:
2	chr1:155232261..155234786-chr1:155281674..155283762,2	K562	blood:
3	chr1:155229651..155232006-chr1:155253590..155255236,2	K562	blood:
4	chr1:155237865..155240224-chr1:155255379..155257758,2	MCF-7	breast:
5	chr1:155245531..155248491-chr1:155261533..155265348,4	MCF-7	breast:
6	chr1:155241171..155245021-chr1:155277000..155280071,7	K562	blood:
7	chr1:155259970..155262506-chr1:155264219..155265784,2	MCF-7	breast:
8	chr1:155241810..155244486-chr1:155276710..155279928,5	K562	blood:
9	chr1:155246820..155248691-chr1:155292451..155293728,14	MCF-7	breast:
10	chr1:155234574..155237301-chr17:58677118..58679465,2	MCF-7	breast:
11	chr1:155258950..155260585-chr1:155268243..155269943,2	MCF-7	breast:
12	chr1:155235972..155238803-chr1:155277477..155279791,2	MCF-7	breast:
13	chr1:155211690..155216212-chr1:155231766..155235735,5	MCF-7	breast:
14	chr1:155260049..155265292-chr1:155266559..155270522,5	K562	blood:
15	chr1:155218456..155235751-chr1:155288837..155299195,44	MCF-7	breast:
16	chr1:155259968..155262452-chr1:155264201..155267047,3	MCF-7	breast:
17	chr1:155242307..155246012-chr1:155257653..155260333,3	MCF-7	breast:
18	chr1:155231631..155232403-chr6:33588518..33589463,2	Hela-S3	cervix:
19	chr1:155242577..155243301-chr7:27224203..27225069,2	Hela-S3	cervix:
20	chr1:155223569..155227620-chr1:155275954..155279861,5	K562	blood:
21	chr1:155229082..155234937-chr1:155291248..155296864,8	K562	blood:
22	chr1:155213177..155216583-chr1:155242889..155246560,4	K562	blood:
23	chr1:155056804..155058815-chr1:155240733..155243389,2	K562	blood:
24	chr1:155254134..155256609-chr1:155273480..155276250,2	MCF-7	breast:
25	chr1:155175880..155178580-chr1:155245010..155247529,2	K562	blood:
26	chr1:155257657..155259293-chr1:155291088..155293098,2	MCF-7	breast:
27	chr1:155213691..155215819-chr1:155247024..155248547,2	MCF-7	breast:
28	chr1:155261117..155264004-chr1:155277463..155281311,3	MCF-7	breast:
29	chr1:155163753..155165613-chr1:155247738..155249904,2	K562	blood:
30	chr1:155261026..155263305-chr1:155270752..155272531,2	K562	blood:
31	chr1:155246729..155248789-chr1:155285548..155288546,2	K562	blood:
32	chr1:155238212..155240823-chr1:155276858..155278738,2	K562	blood:
33	chr1:155228693..155233633-chr1:155276892..155283389,6	K562	blood:
34	chr1:155165434..155167473-chr1:155242958..155244687,2	MCF-7	breast:
35	chr1:155242207..155244752-chr1:155251974..155255810,3	MCF-7	breast:
36	chr1:155220670..155222238-chr1:155260191..155263130,2	MCF-7	breast:
37	chr1:154946748..154948296-chr1:155227059..155229711,2	MCF-7	breast:
38	chr1:155234973..155237775-chr1:155290971..155293651,2	MCF-7	breast:
39	chr1:155193962..155197318-chr1:155243350..155246355,3	K562	blood:
40	chr1:155258490..155260000-chr1:155271609..155274167,2	K562	blood:
41	chr1:155226986..155228712-chr1:155289329..155291450,2	K562	blood:
42	chr1:155236269..155241954-chr1:155291931..155295779,5	K562	blood:
43	chr1:155232307..155234764-chr1:155294401..155296535,2	K562	blood:
44	chr1:155240186..155244594-chr1:155276068..155280700,10	MCF-7	breast:
45	chr1:155230699..155233655-chr6:27804645..27806252,2	MCF-7	breast:
46	chr1:155176808..155180528-chr1:155231411..155234045,4	K562	blood:
47	chr1:155177501..155180439-chr1:155241902..155244852,3	MCF-7	breast:
48	chr1:155242795..155243310-chr12:7053421..7053934,2	Hela-S3	cervix:
49	chr1:155177282..155178806-chr1:155231376..155233429,2	K562	blood:
50	chr1:155055823..155058786-chr1:155242892..155244549,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FDPS-3	chr1:155259182-155259309	NONHSAT006723
2	lnc-FDPS-3	chr1:155258395-155258798	NONHSAT006723

No data

Variant related genes	Relation type
SCAMP3	TF binding region
FAM189B	TF binding region
CLK2	TF binding region
HCN3	TF binding region
SCAMP3	CpG island
FAM189B	CpG island
CLK2	CpG island
HCN3	CpG island
ENSG00000200156	chromatin interactions
ENSG00000264349	chromatin interactions
ENSG00000116539	chromatin interactions
ENSG00000143627	chromatin interactions
ENSG00000240990	chromatin interactions
ENSG00000160766	chromatin interactions
ENSG00000169231	chromatin interactions
ENSG00000160753	chromatin interactions
ENSG00000160691	chromatin interactions
ENSG00000143590	chromatin interactions
ENSG00000160767	chromatin interactions
ENSG00000184348	chromatin interactions
ENSG00000272173	chromatin interactions
ENSG00000185499	chromatin interactions
ENSG00000225855	chromatin interactions
ENSG00000160752	chromatin interactions
ENSG00000163462	chromatin interactions
ENSG00000173171	chromatin interactions
ENSG00000196072	chromatin interactions
ENSG00000196176	chromatin interactions
ENSG00000132842	chromatin interactions
ENSG00000231064	chromatin interactions
ENSG00000177628	chromatin interactions
ENSG00000173207	chromatin interactions
ENSG00000170345	chromatin interactions
ENSG00000170836	chromatin interactions
ENSG00000116521	chromatin interactions
ENSG00000235919	chromatin interactions
ENSG00000176444	chromatin interactions
ENSG00000143630	chromatin interactions
ENSG00000163463	chromatin interactions
ENSG00000096433	chromatin interactions
ENSG00000005073	chromatin interactions
ENSG00000271748	chromatin interactions

Extended variants
information (count: 1378 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:1378 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs199663763	chr1:155227088-155227089	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
2	rs200480124	chr1:155227128-155227129	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
3	rs909107	chr1:155227130-155227131	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
4	rs370574818	chr1:155227132-155227133	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
5	rs909106	chr1:155227139-155227140	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
6	rs573224703	chr1:155227140-155227141	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
7	rs1318328	chr1:155227151-155227152	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
8	rs540227481	chr1:155227152-155227153	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
9	rs374603420	chr1:155227198-155227199	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
10	rs367779322	chr1:155227239-155227240	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
11	rs371626936	chr1:155227310-155227311	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
12	rs191761620	chr1:155227321-155227322	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
13	rs144211111	chr1:155227378-155227379	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
14	rs368555181	chr1:155227382-155227383	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
15	rs372565754	chr1:155227417-155227418	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
16	rs375600980	chr1:155227428-155227429	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs111813693	chr1:155227442-155227443	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs369659534	chr1:155227485-155227486	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs376054844	chr1:155227499-155227500	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs544689236	chr1:155227507-155227508	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs562879076	chr1:155227521-155227522	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs530706987	chr1:155227545-155227546	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
23	rs542869973	chr1:155227562-155227563	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
24	rs561134192	chr1:155227571-155227572	Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs528407566	chr1:155227606-155227607	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
26	rs34278239	chr1:155227643-155227644	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
27	rs555438734	chr1:155227666-155227667	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
28	rs572189271	chr1:155227677-155227678	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
29	rs571221826	chr1:155227697-155227698	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
30	rs148722887	chr1:155227707-155227708	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
31	rs550635673	chr1:155227709-155227710	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs557799151	chr1:155227727-155227728	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs568640734	chr1:155227730-155227731	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs372452788	chr1:155227736-155227737	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs181604557	chr1:155227785-155227786	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs548388778	chr1:155227792-155227793	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs202139187	chr1:155227803-155227804	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs570797336	chr1:155227813-155227814	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs12402253	chr1:155227814-155227815	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
40	rs566782625	chr1:155227831-155227832	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs534509522	chr1:155227832-155227833	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
42	rs559033067	chr1:155227884-155227885	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs577156699	chr1:155227910-155227911	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs537883917	chr1:155227988-155227989	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs556671097	chr1:155228011-155228012	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs543428030	chr1:155228015-155228016	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs143645707	chr1:155228026-155228027	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs12042020	chr1:155228046-155228047	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs561069046	chr1:155228048-155228049	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs11587245	chr1:155228097-155228098	Weak transcription Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Non-small cell lung cancer	21385341	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21183584	CNVD
Multiple myeloma	16461302	CNVD
Lung cancer	18438408	CNVD
Rett syndrome	21593744	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Systemic lupus erythematosus	21956041	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Non-small cell lung cancer	21829676	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	17899364	CNVD
Bladder cancer	19088036	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Retinoblastoma	19183342	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	17060936	CNVD
Multiple myeloma	16616336	CNVD
Type 2 diabetes	19141583	CNVD
Chordoma	18071362	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Urothelial carcinoma	21177765	CNVD
Burkitt''s lymphoma	19759907	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21509527	CNVD
Bladder cancer	21909424	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Testicular germ cell tumor	18059402	CNVD
Trisomy 5 syndrome	21098271	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Glioblastoma multiforme	21138945	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21611746	CNVD
Neuroblastoma	18923191	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Dihydropyrimidine dehydrogenase deficiency	18421352	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:2483 , 50 per page) page: 1 2 3 4 5 6 7 ... 50

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:155223200-155227600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:155225600-155227600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr1:155225600-155228400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr1:155225800-155227200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr1:155225800-155228400	Weak transcription	GM12878-XiMat	blood
6	chr1:155225800-155229600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
7	chr1:155225800-155230000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
8	chr1:155225800-155230200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr1:155225800-155230600	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr1:155225800-155231400	Weak transcription	Aorta	Aorta
11	chr1:155226000-155227200	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr1:155226000-155228400	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr1:155226000-155228800	Strong transcription	Brain Substantia Nigra	brain
14	chr1:155226000-155228800	Strong transcription	Thymus	Thymus
15	chr1:155226000-155229400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr1:155226000-155230000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr1:155226000-155230000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
18	chr1:155226000-155230000	Strong transcription	Primary T helper cells fromperipheralblood	blood
19	chr1:155226000-155230000	Strong transcription	Fetal Thymus	thymus
20	chr1:155226000-155230000	Weak transcription	K562	blood
21	chr1:155226000-155230200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr1:155226000-155230200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
23	chr1:155226000-155230200	Strong transcription	Primary T helper cells PMA-I stimulated	--
24	chr1:155226000-155230200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr1:155226000-155230200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
26	chr1:155226000-155230600	Weak transcription	Primary hematopoietic stem cells	blood
27	chr1:155226000-155230600	Weak transcription	Fetal Kidney	kidney
28	chr1:155226000-155230800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
29	chr1:155226000-155231000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr1:155226000-155231000	Weak transcription	H9 Cell Line	embryonic stem cell
31	chr1:155226000-155231000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
32	chr1:155226000-155231000	Weak transcription	Primary neutrophils fromperipheralblood	blood
33	chr1:155226000-155231200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr1:155226000-155231200	Weak transcription	Right Atrium	heart
35	chr1:155226200-155227800	Strong transcription	Primary T cells from cord blood	blood
36	chr1:155226200-155228400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr1:155226200-155228800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr1:155226200-155228800	Strong transcription	Brain Angular Gyrus	brain
39	chr1:155226200-155229400	Strong transcription	Brain Germinal Matrix	brain
40	chr1:155226200-155229400	Strong transcription	Duodenum Smooth Muscle	Duodenum
41	chr1:155226200-155230200	Strong transcription	Brain Anterior Caudate	brain
42	chr1:155226200-155230200	Weak transcription	Stomach Mucosa	stomach
43	chr1:155226200-155230200	Weak transcription	HMEC	breast
44	chr1:155226200-155230400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr1:155226200-155230400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr1:155226200-155230400	Strong transcription	Fetal Intestine Small	intestine
47	chr1:155226200-155230400	Strong transcription	NHLF	lung
48	chr1:155226200-155230600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr1:155226200-155230600	Weak transcription	NH-A	brain
50	chr1:155226200-155230800	Weak transcription	Psoas Muscle	Psoas

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