The 2.0 version of rSNPBase

Variant report

Variant esv1706093
Chromosome Location chr7:5949337-5949339
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5935200-5951600 Weak transcription HMEC breast
2 chr7:5938000-5950600 Weak transcription H9 Cell Line embryonic stem cell
3 chr7:5938200-5949400 Weak transcription Brain Substantia Nigra brain
4 chr7:5938200-5949600 Weak transcription HUVEC blood vessel
5 chr7:5938200-5950600 Weak transcription Colonic Mucosa Colon
6 chr7:5938200-5952200 Weak transcription NHDF-Ad bronchial
7 chr7:5938200-5952400 Weak transcription GM12878-XiMat blood
8 chr7:5938200-5952600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr7:5938200-5955600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr7:5938200-5962800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr7:5938200-5963400 Weak transcription Colon Smooth Muscle Colon
12 chr7:5938200-5969400 Weak transcription Brain Cingulate Gyrus brain
13 chr7:5938400-5949600 Weak transcription Esophagus oesophagus
14 chr7:5938400-5949600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr7:5938400-5949600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr7:5938400-5950600 Weak transcription Osteobl bone
17 chr7:5938400-5950800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr7:5938400-5952200 Weak transcription HepG2 liver
19 chr7:5938400-5952400 Weak transcription Primary B cells from cord blood blood
20 chr7:5938400-5952400 Weak transcription Rectal Smooth Muscle rectum
21 chr7:5938400-5955600 Weak transcription Primary hematopoietic stem cells blood
22 chr7:5938400-5955600 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr7:5938400-5957800 Weak transcription Aorta Aorta
24 chr7:5938400-5963600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr7:5938400-5966600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr7:5938400-5966800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr7:5938400-5966800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr7:5938400-5967800 Weak transcription HSMMtube muscle
29 chr7:5938400-5971000 Weak transcription Muscle Satellite Cultured Cells --
30 chr7:5938400-5971400 Weak transcription Fetal Muscle Trunk muscle
31 chr7:5938400-5972600 Weak transcription Fetal Brain Female brain
32 chr7:5938600-5950600 Weak transcription Right Ventricle heart
33 chr7:5938600-5962400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr7:5939600-5950800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr7:5939600-5952200 Weak transcription Small Intestine intestine
36 chr7:5939600-5964200 Weak transcription Brain Angular Gyrus brain
37 chr7:5939800-5949400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr7:5939800-5950400 Weak transcription Fetal Stomach stomach
39 chr7:5939800-5950600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr7:5939800-5950800 Weak transcription NH-A brain
41 chr7:5939800-5954600 Weak transcription Fetal Heart heart
42 chr7:5939800-5963200 Weak transcription A549 lung
43 chr7:5939800-5966400 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr7:5940000-5950800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr7:5941200-5955200 Strong transcription Primary neutrophils fromperipheralblood blood
46 chr7:5941800-5952600 Strong transcription Fetal Muscle Leg muscle
47 chr7:5942400-5950000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr7:5942600-5952200 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr7:5943000-5950600 Weak transcription Hela-S3 cervix
50 chr7:5943200-5949600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015