The 2.0 version of rSNPBase

Variant report

Variant esv1720531
Chromosome Location chr6:5389386-5389387
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5368400-5398600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:5369400-5419800 Weak transcription Aorta Aorta
3 chr6:5369600-5417400 Weak transcription Fetal Intestine Small intestine
4 chr6:5371000-5411400 Weak transcription Ovary ovary
5 chr6:5374400-5431400 Weak transcription Primary B cells from cord blood blood
6 chr6:5380200-5395800 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr6:5385200-5391800 Weak transcription Primary T cells from cord blood blood
8 chr6:5385600-5390600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr6:5388000-5389400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr6:5388600-5390000 Enhancers Brain Cingulate Gyrus brain
11 chr6:5388600-5390000 Enhancers Brain Inferior Temporal Lobe brain
12 chr6:5388600-5390000 Enhancers Brain Substantia Nigra brain
13 chr6:5388800-5389800 Enhancers Brain Hippocampus Middle brain
14 chr6:5389000-5390000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr6:5389000-5390000 Enhancers Brain Angular Gyrus brain
16 chr6:5389000-5390000 Enhancers Brain Anterior Caudate brain
17 chr6:5389000-5390400 Enhancers Psoas Muscle Psoas
18 chr6:5389200-5389800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015