Variant report

Variant	esv17730
Chromosome Location	chr10:38894554-38905086
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 356 )
Associated
traits (count: 38 )

Variant overlapped rSNPs/rCNVs (count:356 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs564057492	chr10:38894554-38894555	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs115740445	chr10:38894557-38894558	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs546579756	chr10:38894572-38894573	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs566405332	chr10:38894578-38894579	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs528973875	chr10:38894580-38894581	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs369964753	chr10:38894587-38894588	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs548851474	chr10:38894589-38894590	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs568648196	chr10:38894597-38894598	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs76815950	chr10:38894600-38894601	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs7072095	chr10:38894614-38894615	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs75944068	chr10:38894616-38894617	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs557652499	chr10:38894663-38894664	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs151190510	chr10:38894669-38894670	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs539794830	chr10:38894698-38894699	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs553339479	chr10:38894710-38894711	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs573194608	chr10:38894722-38894723	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs542304120	chr10:38894729-38894730	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs555617342	chr10:38894733-38894734	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs575064948	chr10:38894748-38894749	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs61841291	chr10:38894764-38894765	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs191275804	chr10:38894784-38894785	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs533067698	chr10:38894811-38894812	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs113433787	chr10:38894812-38894813	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs540199132	chr10:38894818-38894819	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs560091595	chr10:38894823-38894824	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs528909030	chr10:38894835-38894836	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs549046946	chr10:38894843-38894844	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs182711621	chr10:38894848-38894849	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs531097579	chr10:38894851-38894852	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs187365809	chr10:38894859-38894860	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs571115032	chr10:38894874-38894875	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs374327032	chr10:38894876-38894877	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs192141317	chr10:38894880-38894881	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs548599998	chr10:38894886-38894887	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs547022852	chr10:38894890-38894891	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs113280817	chr10:38894894-38894895	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs188973973	chr10:38894897-38894898	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs555415443	chr10:38894908-38894909	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs575340273	chr10:38894911-38894912	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs193121618	chr10:38894920-38894921	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs562412507	chr10:38894954-38894955	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs371990831	chr10:38894996-38894997	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs79150083	chr10:38895000-38895001	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs557522695	chr10:38895001-38895002	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs577461846	chr10:38895024-38895025	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs531241098	chr10:38895030-38895031	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs184309201	chr10:38895037-38895038	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs189219483	chr10:38895039-38895040	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs573546781	chr10:38895045-38895046	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs542278416	chr10:38895050-38895051	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:38)

Disease	PMID	Source
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	22286061	CNVD
Colorectal cancer	20459617	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Central neurocytomas	17123091	CNVD
Neurocytoma	17123091	CNVD
small cell lung cancer	20016488	CNVD
Schizophrenia	20967226	CNVD
Myelofibrosis	22110671	CNVD
Medulloblastoma	21163964	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:38893600-38896200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:38896800-38898800	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
3	chr10:38897800-38899000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell

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