Variant report

Variant	esv1779080
Chromosome Location	chr3:158267319-158267321
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 49 )

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs71626436	chr3:158267320-158267321	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:49)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	21115979	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Hepatocellular carcinoma	16750200	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Basal cell lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-small cell lung cancer	19010865	CNVD
abnormal development	18461090	CNVD
Prostate cancer	18632612	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16547154	CNVD
Breast cancer	21364760	CNVD
Gastrointestinal stromal cancer	20818650	CNVD

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:158252600-158267400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr3:158256600-158280000	Weak transcription	K562	blood
3	chr3:158257800-158268000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr3:158258000-158268600	Weak transcription	Pancreas	Pancrea
5	chr3:158258200-158268200	Weak transcription	Adipose Nuclei	Adipose
6	chr3:158259600-158267600	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr3:158259800-158267400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr3:158259800-158270000	Weak transcription	Ovary	ovary
9	chr3:158260000-158279200	Weak transcription	Left Ventricle	heart
10	chr3:158260400-158270600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr3:158262400-158269400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr3:158262600-158267600	Weak transcription	Primary T helper cells PMA-I stimulated	--
13	chr3:158262600-158268200	Weak transcription	Primary T helper cells fromperipheralblood	blood
14	chr3:158263000-158269200	Weak transcription	Liver	Liver
15	chr3:158264200-158267400	Weak transcription	Fetal Muscle Leg	muscle
16	chr3:158265200-158268800	Weak transcription	Aorta	Aorta
17	chr3:158265200-158269600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr3:158265800-158267800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr3:158265800-158268000	Weak transcription	Primary T cells from cord blood	blood
20	chr3:158265800-158270400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr3:158266000-158267600	Weak transcription	Primary B cells from cord blood	blood
22	chr3:158266200-158268600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr3:158266600-158269000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr3:158266600-158269600	Weak transcription	Dnd41	blood
25	chr3:158266800-158268600	Weak transcription	Monocytes-CD14+_RO01746	blood

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