Variant report

Variant	esv1793040
Chromosome Location	chr3:52070955-52091254
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2116)
CpG islands
(count:977)
Chromatin interactive
region (count:51)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:2116 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:52091171-52091620	HepG2	liver:	n/a	n/a
2	ATF3	chr3:52091223-52091370	GM12878	blood:	n/a	n/a
3	ATF3	chr3:52091179-52091464	K562	blood:	n/a	n/a
4	BACH1	chr3:52090669-52092031	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:52075250-52075366	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr3:52089565-52090065	H1-hESC	embryonic stem cell:	n/a	n/a
7	BHLHE40	chr3:52087592-52087819	K562	blood:	n/a	n/a
8	BHLHE40	chr3:52091071-52091368	A549	lung:	n/a	n/a
9	BHLHE40	chr3:52091031-52091599	HepG2	liver:	n/a	chr3:52091498-52091514
10	BHLHE40	chr3:52073927-52074294	HepG2	liver:	n/a	n/a
11	BHLHE40	chr3:52090568-52091738	K562	blood:	n/a	chr3:52091498-52091514 chr3:52090590-52090606
12	BHLHE40	chr3:52087392-52087901	GM12878	blood:	n/a	n/a
13	BHLHE40	chr3:52090014-52090259	GM12878	blood:	n/a	n/a
14	BHLHE40	chr3:52091060-52091780	GM12878	blood:	n/a	chr3:52091498-52091514
15	BHLHE40	chr3:52089325-52089338	GM12878	blood:	n/a	n/a
16	BHLHE40	chr3:52089631-52089671	GM12878	blood:	n/a	n/a
17	BHLHE40	chr3:52089955-52090163	K562	blood:	n/a	n/a
18	BHLHE40	chr3:52090492-52090850	GM12878	blood:	n/a	chr3:52090590-52090606
19	BHLHE40	chr3:52086923-52087175	GM12878	blood:	n/a	n/a
20	BRCA1	chr3:52090153-52090187	Hela-S3	cervix:	n/a	n/a
21	BRCA1	chr3:52086943-52087000	GM12878	blood:	n/a	n/a
22	CBX3	chr3:52090881-52091344	K562	blood:	n/a	n/a
23	CCNT2	chr3:52090536-52091099	K562	blood:	n/a	chr3:52090909-52090918
24	CCNT2	chr3:52087059-52087262	K562	blood:	n/a	n/a
25	CCNT2	chr3:52089689-52090249	K562	blood:	n/a	n/a
26	CEBPB	chr3:52080557-52081071	Hela-S3	cervix:	n/a	n/a
27	CEBPB	chr3:52073923-52074338	ECC-1	luminal epithelium:	n/a	n/a
28	CEBPB	chr3:52080544-52080965	IMR90	lung:	n/a	n/a
29	CEBPB	chr3:52071403-52071578	HepG2	liver:	n/a	chr3:52071523-52071534
30	CEBPB	chr3:52073866-52074338	HepG2	liver:	n/a	n/a
31	CEBPB	chr3:52073907-52074259	HepG2	liver:	n/a	n/a
32	CEBPB	chr3:52073876-52074311	HepG2	liver:	n/a	n/a
33	CEBPB	chr3:52090025-52090132	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr3:52071340-52071710	HepG2	liver:	n/a	chr3:52071523-52071534
35	CEBPB	chr3:52071367-52071678	HepG2	liver:	n/a	chr3:52071523-52071534
36	CEBPB	chr3:52071362-52071671	Hela-S3	cervix:	n/a	chr3:52071523-52071534
37	CEBPB	chr3:52071351-52071678	K562	blood:	n/a	chr3:52071523-52071534
38	CEBPB	chr3:52073939-52074233	HepG2	liver:	n/a	n/a
39	CEBPB	chr3:52079687-52079887	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr3:52091112-52091711	HepG2	liver:	n/a	n/a
41	CEBPB	chr3:52091057-52091843	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr3:52071366-52071684	IMR90	lung:	n/a	chr3:52071523-52071534
43	CEBPD	chr3:52090478-52090797	HepG2	liver:	n/a	n/a
44	CHD1	chr3:52086768-52087151	GM12878	blood:	n/a	n/a
45	CHD1	chr3:52089299-52089518	GM12878	blood:	n/a	n/a
46	CHD2	chr3:52089502-52090307	Hela-S3	cervix:	n/a	n/a
47	CHD2	chr3:52090621-52091791	GM12878	blood:	n/a	chr3:52090988-52090998 chr3:52090658-52090665
48	CHD2	chr3:52088970-52089132	Hela-S3	cervix:	n/a	n/a
49	CHD2	chr3:52074221-52074265	HepG2	liver:	n/a	n/a
50	CHD2	chr3:52090025-52090207	GM12878	blood:	n/a	n/a

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:52084505-52084555	AG04450	lung:	fetal
2	chr3:52084505-52084555	AG04450	lung:	fetal
3	chr3:52090142-52090192	HCT-116	colon:	n/a
4	chr3:52088726-52088776	Caco-2	colon:	n/a
5	chr3:52090142-52090192	HMEC	breast:	n/a
6	chr3:52084921-52084971	Hela-S3	cervix:	n/a
7	chr3:52089313-52089363	RPTEC	kidney:	n/a
8	chr3:52087583-52087633	NT2-D1	testis:	n/a
9	chr3:52089313-52089363	GM12878	blood:	n/a
10	chr3:52084921-52084971	K562	blood:	n/a
11	chr3:52090647-52090697	AG09319	gingival:	n/a
12	chr3:52090142-52090192	AG04450	lung:	fetal
13	chr3:52090732-52090782	GM12878	blood:	n/a
14	chr3:52084879-52084929	GM06990	blood:	n/a
15	chr3:52090647-52090697	GM19239	blood:	n/a
16	chr3:52090125-52090175	HUVEC	blood vessel:	n/a
17	chr3:52074172-52074222	HL-60	blood:	n/a
18	chr3:52087583-52087633	NH-A	brain:	n/a
19	chr3:52090142-52090192	SK-N-MC	brain:	n/a
20	chr3:52087583-52087633	AG09309	skin:	n/a
21	chr3:52089752-52089802	Hepatocyte	liver:	n/a
22	chr3:52088253-52088303	K562	blood:	n/a
23	chr3:52090647-52090697	HCM	heart:	n/a
24	chr3:52080778-52080828	HUVEC	blood vessel:	n/a
25	chr3:52088139-52088189	HEK293	kidney:	embryo
26	chr3:52084879-52084929	HRCEpiC	kidney:	n/a
27	chr3:52089313-52089363	HRCEpiC	kidney:	n/a
28	chr3:52080778-52080828	CMK	blood:	n/a
29	chr3:52088253-52088303	SK-N-SH_RA	brain:	n/a
30	chr3:52090732-52090782	MCF-7	breast:	n/a
31	chr3:52090142-52090192	A549	lung:	n/a
32	chr3:52090125-52090175	IMR90	lung:	fetal
33	chr3:52089752-52089802	BJ	skin:	n/a
34	chr3:52087583-52087633	AG09319	gingival:	n/a
35	chr3:52084505-52084555	SK-N-MC	brain:	n/a
36	chr3:52088139-52088189	HRPEpiC	eye:	n/a
37	chr3:52087583-52087633	HEEpiC	esophagus:	n/a
38	chr3:52090142-52090192	HCM	heart:	n/a
39	chr3:52090732-52090782	HUVEC	blood vessel:	n/a
40	chr3:52087583-52087633	NB4	blood:	n/a
41	chr3:52090125-52090175	GM12892	blood:	n/a
42	chr3:52089752-52089802	GM19239	blood:	n/a
43	chr3:52084879-52084929	HepG2	liver:	n/a
44	chr3:52074172-52074222	GM06990	blood:	n/a
45	chr3:52090732-52090782	ECC-1	luminal epithelium:	n/a
46	chr3:52088726-52088776	HAEpiC	amniotic membrane:	n/a
47	chr3:52084879-52084929	AG04449	skin:	fetal
48	chr3:52084505-52084555	HUVEC	blood vessel:	n/a
49	chr3:52074172-52074222	AG09309	skin:	n/a
50	chr3:52090142-52090192	GM06990	blood:	n/a

(count:51 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr3:52075553..52077141-chr3:52077699..52080680,2	MCF-7	breast:
2	chr3:51974263..51977386-chr3:52088681..52091436,3	K562	blood:
3	chr3:52085365..52087890-chr3:52105786..52108458,2	MCF-7	breast:
4	chr3:52087227..52088495-chr3:52178231..52179051,5	MCF-7	breast:
5	chr3:52015921..52019600-chr3:52088214..52092499,4	K562	blood:
6	chr3:52081717..52084424-chr3:52095750..52098933,3	K562	blood:
7	chr3:52087497..52088178-chr3:52156864..52157381,2	K562	blood:
8	chr3:52073586..52075910-chr3:52075933..52079449,3	K562	blood:
9	chr3:52028061..52031321-chr3:52088873..52092735,5	MCF-7	breast:
10	chr3:51975919..51976628-chr3:52090698..52091583,2	K562	blood:
11	chr3:52089814..52091351-chr3:52187528..52189873,2	K562	blood:
12	chr3:52060421..52063278-chr3:52077239..52079436,2	K562	blood:
13	chr3:52075019..52075844-chr3:52156892..52157417,2	MCF-7	breast:
14	chr3:52088419..52090155-chr3:52113932..52115849,2	K562	blood:
15	chr3:52087390..52089445-chr3:52228138..52231082,2	K562	blood:
16	chr3:52075553..52077141-chr3:52077699..52080680,2	MCF-7	breast:
17	chr3:52073219..52077192-chr3:52084183..52087148,3	K562	blood:
18	chr3:52086312..52088245-chr3:52101960..52104094,2	MCF-7	breast:
19	chr3:52073586..52075910-chr3:52075933..52079449,3	K562	blood:
20	chr3:52063916..52065862-chr3:52068496..52071263,2	MCF-7	breast:
21	chr3:52026823..52031380-chr3:52087204..52091486,4	K562	blood:
22	chr19:12901888..12902868-chr3:52090426..52090997,2	Hela-S3	cervix:
23	chr3:52087181..52088866-chr3:52188475..52190351,2	K562	blood:
24	chr3:52088633..52090447-chr3:52187469..52189147,2	MCF-7	breast:
25	chr3:52073750..52075250-chr3:52077186..52079119,2	MCF-7	breast:
26	chr3:52073219..52077192-chr3:52084183..52087148,3	K562	blood:
27	chr3:51974895..51976742-chr3:52087202..52089493,2	K562	blood:
28	chr3:52024713..52026364-chr3:52074077..52075668,2	MCF-7	breast:
29	chr3:52077892..52079847-chr3:52080984..52082911,3	MCF-7	breast:
30	chr3:52073750..52075250-chr3:52077186..52079119,2	MCF-7	breast:
31	chr3:52048463..52050147-chr3:52081246..52082916,2	MCF-7	breast:
32	chr3:52089534..52090129-chr5:139554580..139555447,2	Hela-S3	cervix:
33	chr1:149222699..149225112-chr3:52088904..52091700,2	MCF-7	breast:
34	chr3:52088485..52093169-chr3:52093699..52100396,11	MCF-7	breast:
35	chr3:52069883..52072776-chr3:52161086..52163454,2	K562	blood:
36	chr3:52016320..52018909-chr3:52089400..52091632,2	MCF-7	breast:
37	chr3:52071945..52074721-chr3:52081198..52083628,2	K562	blood:
38	chr3:52071455..52074852-chr3:52088156..52091655,5	MCF-7	breast:
39	chr3:52088066..52089919-chr3:52114349..52115931,2	K562	blood:
40	chr3:52072120..52075086-chr3:52077949..52079553,2	K562	blood:
41	chr3:52028475..52031255-chr3:52087467..52089239,2	MCF-7	breast:
42	chr3:52063546..52065859-chr3:52080631..52082453,2	MCF-7	breast:
43	chr3:52035106..52036016-chr3:52083953..52084656,2	MCF-7	breast:
44	chr3:52086989..52088161-chr3:52156846..52157770,4	MCF-7	breast:
45	chr3:52077892..52079847-chr3:52080984..52082911,3	MCF-7	breast:
46	chr3:52078841..52079796-chr3:52155287..52155819,2	NB4	blood:
47	chr3:52071945..52074721-chr3:52081198..52083628,2	K562	blood:
48	chr3:52033119..52035540-chr3:52073056..52074856,2	K562	blood:
49	chr3:52060421..52065315-chr3:52077239..52080916,4	K562	blood:
50	chr3:52063502..52067953-chr3:52083827..52087506,5	K562	blood:

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	DUSP7	hsa-let-7c-5p	chr3:52083255-52083249

Variant related genes	Relation type
DUSP7	TF binding region
DUSP7	CpG island
ENSG00000164086	chromatin interactions
ENSG00000164087	chromatin interactions
ENSG00000171223	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000114779	chromatin interactions
ENSG00000120306	chromatin interactions
ENSG00000256097	chromatin interactions
ENSG00000162244	chromatin interactions
ENSG00000114767	chromatin interactions
ENSG00000041880	chromatin interactions
ENSG00000243989	chromatin interactions

Extended variants
information (count: 784 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:784 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9848727	chr3:52070955-52070956	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs138052956	chr3:52070964-52070965	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs185154721	chr3:52070975-52070976	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs188888613	chr3:52070982-52070983	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs534016989	chr3:52070985-52070986	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs377708441	chr3:52071047-52071048	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
7	rs547496614	chr3:52071057-52071058	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
8	rs566033960	chr3:52071068-52071069	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
9	rs377692407	chr3:52071084-52071085	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
10	rs141511986	chr3:52071093-52071094	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
11	rs554892938	chr3:52071105-52071106	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
12	rs576350703	chr3:52071109-52071110	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
13	rs11709912	chr3:52071229-52071230	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
14	rs150885003	chr3:52071300-52071301	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
15	rs138282471	chr3:52071335-52071336	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
16	rs370095515	chr3:52071394-52071395	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
17	rs576877600	chr3:52071398-52071399	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
18	rs149630956	chr3:52071454-52071455	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
19	rs80342165	chr3:52071536-52071537	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs114379685	chr3:52071557-52071558	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs542962592	chr3:52071595-52071596	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs9833784	chr3:52071647-52071648	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs374300578	chr3:52071677-52071678	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs550126553	chr3:52071690-52071691	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs577184250	chr3:52071694-52071695	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs532503393	chr3:52071695-52071696	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs78064909	chr3:52071723-52071724	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs537820855	chr3:52071773-52071774	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs368828498	chr3:52071787-52071788	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs567704217	chr3:52071792-52071793	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs536645364	chr3:52071804-52071805	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs536643402	chr3:52071873-52071874	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs377280704	chr3:52071972-52071973	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs569949930	chr3:52072003-52072004	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs556841823	chr3:52072031-52072032	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs66530305	chr3:52072084-52072085	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs77806457	chr3:52072097-52072098	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs115561179	chr3:52072100-52072101	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs376629601	chr3:52072110-52072111	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs552638955	chr3:52072128-52072129	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs192221266	chr3:52072141-52072142	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs541412393	chr3:52072142-52072143	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs138987075	chr3:52072143-52072144	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs373712136	chr3:52072144-52072145	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs7642788	chr3:52072197-52072198	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs35227865	chr3:52072212-52072213	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs140001838	chr3:52072213-52072214	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs369719656	chr3:52072231-52072232	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs143641525	chr3:52072232-52072233	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs372424175	chr3:52072255-52072256	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Bladder cancer	21909424	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1405 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52050600-52073400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr3:52062200-52073800	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr3:52063600-52072400	Weak transcription	HSMM	muscle
4	chr3:52064400-52073600	Weak transcription	Spleen	Spleen
5	chr3:52066200-52071000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr3:52066400-52073600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:52067200-52072400	Weak transcription	Fetal Brain Female	brain
8	chr3:52067400-52071800	Weak transcription	Esophagus	oesophagus
9	chr3:52067400-52073400	Weak transcription	Left Ventricle	heart
10	chr3:52067600-52072600	Weak transcription	Fetal Brain Male	brain
11	chr3:52067600-52072600	Weak transcription	Right Atrium	heart
12	chr3:52067600-52073600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr3:52067600-52073800	Weak transcription	Brain Germinal Matrix	brain
14	chr3:52067800-52071400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr3:52067800-52071400	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr3:52067800-52072800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr3:52068600-52074000	Weak transcription	Liver	Liver
18	chr3:52068800-52073600	Enhancers	HepG2	liver
19	chr3:52069200-52072200	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr3:52069600-52071200	Enhancers	GM12878-XiMat	blood
21	chr3:52069600-52071800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr3:52069600-52075000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr3:52069600-52075800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr3:52069600-52076200	Enhancers	Brain Angular Gyrus	brain
25	chr3:52069800-52071800	Weak transcription	Skeletal Muscle Male	skeletal muscle
26	chr3:52070000-52071200	Enhancers	Primary B cells from peripheral blood	blood
27	chr3:52070000-52076200	Enhancers	Brain Inferior Temporal Lobe	brain
28	chr3:52070200-52071800	Weak transcription	Right Ventricle	heart
29	chr3:52070200-52073600	Enhancers	NHEK	skin
30	chr3:52070200-52076200	Enhancers	Brain Cingulate Gyrus	brain
31	chr3:52070200-52076400	Enhancers	Brain Anterior Caudate	brain
32	chr3:52070400-52071600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr3:52070600-52071000	Weak transcription	Primary T helper cells PMA-I stimulated	--
34	chr3:52070600-52071200	Weak transcription	Fetal Muscle Leg	muscle
35	chr3:52070600-52071600	Enhancers	Fetal Muscle Trunk	muscle
36	chr3:52070800-52076200	Enhancers	Brain Hippocampus Middle	brain
37	chr3:52070800-52076200	Enhancers	Brain Substantia Nigra	brain
38	chr3:52071000-52071200	Enhancers	Primary T helper cells PMA-I stimulated	--
39	chr3:52071000-52071600	Enhancers	H1 Cell Line	embryonic stem cell
40	chr3:52071000-52071600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
41	chr3:52071000-52071800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
42	chr3:52071000-52072000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
43	chr3:52071200-52075800	Enhancers	Fetal Muscle Leg	muscle
44	chr3:52071200-52075800	Enhancers	HMEC	breast
45	chr3:52071200-52079600	Weak transcription	Primary T helper cells PMA-I stimulated	--
46	chr3:52071400-52071600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr3:52071400-52071600	Enhancers	Skeletal Muscle Female	skeletal muscle
48	chr3:52071400-52072400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr3:52071400-52074200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
50	chr3:52071600-52071800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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