No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs10039048 |
chr5:43313178-43313179 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
17 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs368230220 |
chr5:43313185-43313186 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs575995672 |
chr5:43313233-43313234 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs540423139 |
chr5:43313241-43313242 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs560318150 |
chr5:43313267-43313268 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs577426383 |
chr5:43313299-43313300 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs546492054 |
chr5:43313308-43313309 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
Chromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs371138309 |
chr5:43313352-43313353 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
24 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs530508212 |
chr5:43313391-43313392 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
24 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs550632294 |
chr5:43313409-43313410 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
22 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs112169902 |
chr5:43313472-43313473 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
22 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs529863646 |
chr5:43313499-43313500 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
22 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs12514393 |
chr5:43313531-43313532 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
22 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
14 |
rs182483294 |
chr5:43313533-43313534 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
22 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs538526106 |
chr5:43313534-43313535 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
22 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs141874129 |
chr5:43313559-43313560 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs186516962 |
chr5:43313565-43313566 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs12514399 |
chr5:43313570-43313571 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
18 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
19 |
rs191840702 |
chr5:43313574-43313575 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs534038877 |
chr5:43313581-43313582 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs554039922 |
chr5:43313651-43313652 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs577391081 |
chr5:43313708-43313709 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs113636929 |
chr5:43313713-43313714 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs372333226 |
chr5:43313744-43313745 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs563183697 |
chr5:43313756-43313757 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs576706507 |
chr5:43313796-43313797 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs573534731 |
chr5:43313823-43313824 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs544224859 |
chr5:43313883-43313884 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs7710717 |
chr5:43313942-43313943 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
30 |
rs568584283 |
chr5:43313949-43313950 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs183242991 |
chr5:43313954-43313955 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs560016413 |
chr5:43313971-43313972 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs368147564 |
chr5:43313973-43313974 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs532318460 |
chr5:43314027-43314028 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs552128200 |
chr5:43314035-43314036 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs188699118 |
chr5:43314037-43314038 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs12515072 |
chr5:43314076-43314077 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
38 |
rs192406765 |
chr5:43314129-43314130 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs150672652 |
chr5:43314132-43314133 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs7729140 |
chr5:43314216-43314217 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|