Variant report

Variant	esv1793643
Chromosome Location	chr10:89625582-89645473
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:89638569-89639130	K562	blood:	n/a	n/a
2	ARID3A	chr10:89628433-89628872	K562	blood:	n/a	n/a
3	ARID3A	chr10:89627562-89628058	K562	blood:	n/a	n/a
4	ATF1	chr10:89638697-89639079	K562	blood:	n/a	n/a
5	BCLAF1	chr10:89638664-89639157	K562	blood:	n/a	n/a
6	BCLAF1	chr10:89624838-89625759	GM12878	blood:	n/a	n/a
7	BHLHE40	chr10:89632799-89632804	K562	blood:	n/a	n/a
8	CBX3	chr10:89638705-89639172	K562	blood:	n/a	n/a
9	CBX3	chr10:89638725-89639060	K562	blood:	n/a	n/a
10	CCNT2	chr10:89638737-89639000	K562	blood:	n/a	chr10:89638935-89638955
11	CCNT2	chr10:89625951-89626212	K562	blood:	n/a	n/a
12	CCNT2	chr10:89643089-89643289	K562	blood:	n/a	n/a
13	CEBPB	chr10:89635970-89636287	IMR90	lung:	n/a	chr10:89636111-89636122 chr10:89636113-89636122 chr10:89636166-89636178 chr10:89636112-89636123
14	CEBPB	chr10:89637644-89637833	Hela-S3	cervix:	n/a	chr10:89637754-89637767 chr10:89637754-89637767 chr10:89637755-89637766 chr10:89637754-89637765
15	CEBPB	chr10:89637658-89637806	HepG2	liver:	n/a	chr10:89637754-89637767 chr10:89637754-89637767 chr10:89637755-89637766 chr10:89637754-89637765
16	CEBPB	chr10:89644622-89644937	K562	blood:	n/a	chr10:89644783-89644794
17	CEBPB	chr10:89635960-89636273	HepG2	liver:	n/a	chr10:89636111-89636122 chr10:89636113-89636122 chr10:89636166-89636178 chr10:89636112-89636123
18	CEBPB	chr10:89638808-89639206	K562	blood:	n/a	n/a
19	CEBPB	chr10:89644644-89644954	IMR90	lung:	n/a	chr10:89644783-89644794
20	CEBPB	chr10:89638751-89639193	K562	blood:	n/a	n/a
21	CEBPB	chr10:89635936-89636307	Hela-S3	cervix:	n/a	chr10:89636111-89636122 chr10:89636113-89636122 chr10:89636166-89636178 chr10:89636112-89636123
22	CEBPB	chr10:89637645-89637830	H1-hESC	embryonic stem cell:	n/a	chr10:89637754-89637767 chr10:89637754-89637767 chr10:89637755-89637766 chr10:89637754-89637765
23	CEBPB	chr10:89638870-89639070	K562	blood:	n/a	n/a
24	CEBPB	chr10:89637619-89637930	K562	blood:	n/a	chr10:89637754-89637767 chr10:89637754-89637767 chr10:89637755-89637766 chr10:89637754-89637765
25	CEBPB	chr10:89644634-89644939	A549	lung:	n/a	chr10:89644783-89644794
26	CEBPB	chr10:89625591-89625870	Hela-S3	cervix:	n/a	chr10:89625781-89625792 chr10:89625789-89625802 chr10:89625739-89625751 chr10:89625791-89625802 chr10:89625724-89625735 chr10:89625738-89625749
27	CEBPB	chr10:89627689-89627878	K562	blood:	n/a	chr10:89627720-89627733
28	CEBPB	chr10:89637633-89637831	IMR90	lung:	n/a	chr10:89637754-89637767 chr10:89637754-89637767 chr10:89637755-89637766 chr10:89637754-89637765
29	CEBPB	chr10:89644708-89644936	H1-hESC	embryonic stem cell:	n/a	chr10:89644783-89644794
30	CEBPB	chr10:89635900-89636337	A549	lung:	n/a	chr10:89636111-89636122 chr10:89636113-89636122 chr10:89636166-89636178 chr10:89636112-89636123
31	CEBPB	chr10:89644635-89644971	HepG2	liver:	n/a	chr10:89644783-89644794
32	CEBPB	chr10:89644695-89644955	Hela-S3	cervix:	n/a	chr10:89644783-89644794
33	CEBPB	chr10:89635985-89636266	A549	lung:	n/a	chr10:89636111-89636122 chr10:89636113-89636122 chr10:89636166-89636178 chr10:89636112-89636123
34	CEBPB	chr10:89635944-89636282	K562	blood:	n/a	chr10:89636111-89636122 chr10:89636113-89636122 chr10:89636166-89636178 chr10:89636112-89636123
35	CEBPD	chr10:89638647-89639113	K562	blood:	n/a	n/a
36	CHD1	chr10:89624056-89627544	GM12878	blood:	n/a	n/a
37	CHD1	chr10:89629846-89630046	GM12878	blood:	n/a	n/a
38	CHD1	chr10:89627868-89628574	GM12878	blood:	n/a	n/a
39	CHD1	chr10:89620818-89626993	IMR90	lung:	n/a	chr10:89623233-89623243 chr10:89623660-89623670
40	CTCF	chr10:89644753-89644865	Lung_OC	lung:	n/a	n/a
41	CTCF	chr10:89629135-89629189	GM13976	blood:	n/a	n/a
42	CTCF	chr10:89633200-89633350	SAEC	small airway:	n/a	n/a
43	CUX1	chr10:89638165-89638309	K562	blood:	n/a	n/a
44	CUX1	chr10:89626194-89626251	GM12878	blood:	n/a	n/a
45	E2F4	chr10:89627685-89628189	MCF10A-Er-Src	breast:	n/a	n/a
46	EBF1	chr10:89630614-89630616	GM12878	blood:	n/a	n/a
47	EP300	chr10:89633096-89633126	GM12878	blood:	n/a	n/a
48	EP300	chr10:89642233-89642606	SK-N-SH_RA	brain:	n/a	chr10:89642458-89642472 chr10:89642588-89642602
49	EP300	chr10:89638631-89639190	K562	blood:	n/a	n/a
50	EP300	chr10:89638792-89639146	K562	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:89627854-89627904	HNPCEpiC	eye:	n/a
2	chr10:89627854-89627904	NH-A	brain:	n/a
3	chr10:89627854-89627904	Caco-2	colon:	n/a
4	chr10:89627854-89627904	HUVEC	blood vessel:	n/a
5	chr10:89627854-89627904	HCF	heart:	n/a
6	chr10:89627854-89627904	SK-N-SH_RA	brain:	n/a
7	chr10:89627854-89627904	AG09309	skin:	n/a
8	chr10:89627854-89627904	Jurkat	blood:	n/a
9	chr10:89627854-89627904	IMR90	lung:	fetal
10	chr10:89627854-89627904	NT2-D1	testis:	n/a
11	chr10:89627854-89627904	HCT-116	colon:	n/a
12	chr10:89627854-89627904	BJ	skin:	n/a
13	chr10:89627854-89627904	HRE	kidney:	n/a
14	chr10:89627854-89627904	HRPEpiC	eye:	n/a
15	chr10:89627854-89627904	HIPEpiC	eye:	n/a
16	chr10:89627854-89627904	Hela-S3	cervix:	n/a
17	chr10:89627854-89627904	T-47D	breast:	n/a
18	chr10:89627854-89627904	PFSK-1	brain:	n/a
19	chr10:89627854-89627904	ProgFib	skin:	n/a
20	chr10:89627854-89627904	H1-hESC	embryonic stem cell:	embryo
21	chr10:89627854-89627904	SK-N-SH	brain:	n/a
22	chr10:89627854-89627904	HAEpiC	amniotic membrane:	n/a
23	chr10:89627854-89627904	GM12878	blood:	n/a
24	chr10:89627854-89627904	AG04450	lung:	fetal
25	chr10:89627854-89627904	ovcar-3	ovarian:	n/a
26	chr10:89627854-89627904	SKMC	muscle:	n/a
27	chr10:89627854-89627904	NB4	blood:	n/a
28	chr10:89627854-89627904	AoSMC	blood vessel:	n/a
29	chr10:89627854-89627904	PrEC	prostate:	n/a
30	chr10:89627854-89627904	SK-N-MC	brain:	n/a
31	chr10:89627854-89627904	HRCEpiC	kidney:	n/a
32	chr10:89627854-89627904	LNCaP	prostate:	n/a
33	chr10:89627854-89627904	U87	brain:	n/a
34	chr10:89627854-89627904	K562	blood:	n/a
35	chr10:89627854-89627904	PANC-1	pancreas:	n/a
36	chr10:89627854-89627904	RPTEC	kidney:	n/a
37	chr10:89627854-89627904	AG09319	gingival:	n/a
38	chr10:89627854-89627904	BE2_C	brain:	n/a
39	chr10:89627854-89627904	HEK293	kidney:	embryo
40	chr10:89627854-89627904	HMEC	breast:	n/a
41	chr10:89627854-89627904	GM12892	blood:	n/a
42	chr10:89627854-89627904	GM12891	blood:	n/a
43	chr10:89627854-89627904	HepG2	liver:	n/a
44	chr10:89627854-89627904	NHDF-neo	bronchial:	n/a
45	chr10:89627854-89627904	Hepatocyte	liver:	n/a
46	chr10:89627854-89627904	SAEC	small airway:	n/a
47	chr10:89627854-89627904	HEEpiC	esophagus:	n/a
48	chr10:89627854-89627904	ECC-1	luminal epithelium:	n/a
49	chr10:89627854-89627904	A549	lung:	n/a
50	chr10:89627854-89627904	MCF10A-Er-Src	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr10:89628472..89630169-chr10:89642973..89645444,2	K562	blood:
2	chr10:89628472..89630169-chr10:89642973..89645444,2	K562	blood:
3	chr10:89630597..89633078-chr10:89635123..89637172,2	MCF-7	breast:
4	chr10:89640838..89642681-chr10:89647239..89649894,3	K562	blood:
5	chr10:89576887..89579810-chr10:89632591..89635220,2	K562	blood:
6	chr10:89632106..89634679-chr10:89635218..89637761,3	MCF-7	breast:
7	chr10:89619679..89625045-chr10:89627844..89633340,9	K562	blood:
8	chr10:89627048..89629019-chr10:89631649..89634484,2	K562	blood:
9	chr10:89614074..89616634-chr10:89625613..89627325,2	MCF-7	breast:
10	chr10:89627960..89634049-chr10:89634179..89640530,8	K562	blood:
11	chr10:89642392..89644637-chr10:89652677..89655610,2	MCF-7	breast:
12	chr10:89632106..89634679-chr10:89635218..89637761,3	MCF-7	breast:
13	chr10:89620447..89623271-chr10:89637766..89641518,4	MCF-7	breast:
14	chr10:89622085..89623655-chr10:89643936..89646220,2	MCF-7	breast:
15	chr10:89639384..89642070-chr10:89695863..89697662,2	K562	blood:
16	chr10:89641632..89644559-chr10:89685193..89686750,2	K562	blood:
17	chr10:89619679..89625889-chr10:89627245..89632129,8	K562	blood:
18	chr10:89577120..89579087-chr10:89622150..89625835,3	MCF-7	breast:
19	chr10:89630068..89631816-chr10:89794611..89796207,2	MCF-7	breast:
20	chr10:89628331..89631690-chr10:89632886..89636887,5	MCF-7	breast:
21	chr10:89630597..89633078-chr10:89635123..89637172,2	MCF-7	breast:
22	chr10:89629893..89635065-chr10:89636010..89640351,6	K562	blood:
23	chr10:89622936..89626124-chr10:89632043..89636497,5	MCF-7	breast:
24	chr10:89639033..89641731-chr10:89644524..89647018,2	K562	blood:
25	chr10:89621343..89626061-chr10:89634894..89638873,7	K562	blood:
26	chr10:89627048..89629019-chr10:89631649..89634484,2	K562	blood:
27	chr10:89623575..89625821-chr10:89638981..89641950,2	K562	blood:
28	chr10:89639033..89641731-chr10:89644524..89647018,2	K562	blood:
29	chr10:89638682..89641996-chr10:89653428..89657390,3	K562	blood:
30	chr10:89628331..89631690-chr10:89632886..89636887,5	MCF-7	breast:
31	chr10:89621343..89626061-chr10:89634894..89638873,7	K562	blood:
32	chr10:89631936..89633868-chr10:90147243..90149574,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PAPSS2-5	chr10:89626430-89626806	NONHSAT015458
2	lnc-PAPSS2-2	chr10:89640057-89640184	ENSG00000224745.1
3	lnc-PAPSS2-6	chr10:89628629-89628901	expReg_chr10_5609_+
4	lnc-PAPSS2-2	chr10:89639829-89639867	ENSG00000224745.1
5	lnc-PAPSS2-2	chr10:89638449-89638780	ENSG00000224745.1

Variant related genes	Relation type
ENSG00000224745	TF binding region
KLLN	TF binding region
ENSG00000224745	CpG island
KLLN	CpG island
ENSG00000223820	chromatin interactions
ENSG00000227268	chromatin interactions
ENSG00000171862	chromatin interactions
ENSG00000224745	chromatin interactions
ENSG00000138138	chromatin interactions

Extended variants
information (count: 698 )
Associated
traits (count: 119 )

Variant overlapped rSNPs/rCNVs (count:698 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs35274268	chr10:89625582-89625583	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs114634814	chr10:89625594-89625595	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs573766044	chr10:89625602-89625603	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs537675323	chr10:89625603-89625604	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs556423041	chr10:89625681-89625682	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs370264790	chr10:89625706-89625707	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs36025175	chr10:89625722-89625723	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs397844451	chr10:89625726-89625727	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs543703608	chr10:89625788-89625789	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs542841208	chr10:89625796-89625797	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs376197622	chr10:89625804-89625805	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs369140657	chr10:89625810-89625811	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs188818913	chr10:89625818-89625819	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs368417328	chr10:89625876-89625877	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs560194845	chr10:89625895-89625896	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs191987406	chr10:89626005-89626006	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs530571794	chr10:89626031-89626032	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs542759402	chr10:89626033-89626034	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs35930911	chr10:89626056-89626057	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs1903859	chr10:89626086-89626087	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs567508017	chr10:89626116-89626117	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs550938938	chr10:89626118-89626119	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs375067011	chr10:89626162-89626163	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs533453042	chr10:89626169-89626170	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs536349902	chr10:89626190-89626191	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs546746065	chr10:89626192-89626193	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs551313721	chr10:89626220-89626221	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs527649472	chr10:89626256-89626257	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs373089501	chr10:89626273-89626274	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs538645509	chr10:89626304-89626305	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs12782009	chr10:89626306-89626307	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs12776804	chr10:89626307-89626308	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs374162246	chr10:89626347-89626348	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs201952487	chr10:89626350-89626351	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs79540160	chr10:89626375-89626376	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs397704885	chr10:89626377-89626378	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs397701299	chr10:89626378-89626379	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs566547148	chr10:89626385-89626386	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs533967360	chr10:89626449-89626450	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs140979097	chr10:89626479-89626480	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs144930953	chr10:89626481-89626482	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs532384642	chr10:89626510-89626511	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs184451314	chr10:89626512-89626513	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs147923172	chr10:89626746-89626747	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs577822594	chr10:89626772-89626773	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs371567098	chr10:89626829-89626830	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs41284070	chr10:89626845-89626846	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs553766815	chr10:89626877-89626878	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs555138185	chr10:89626898-89626899	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs112148024	chr10:89626922-89626923	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:119)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Usher syndrome	20538994	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Paraganglioma	17535989	CNVD
Submicroscopic aberration syndrome	21292638	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Colorectal cancer	18645599	CNVD
Polyposis syndrome	18645599	CNVD
Prostate cancer	17245344	CNVD
Glioblastoma multiforme	17369134	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	22032731	CNVD
Ovarian cancer	20844748	CNVD
Glioblastoma multiforme	17002787	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21364760	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	21569311	CNVD
Cancer	20164919	CNVD
Melanoma	17363583	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Urothelial carcinoma	21177765	CNVD
Cancer	20164920	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Colorectal cancer	19359472	CNVD
Neurocytoma	17123091	CNVD
Prostate cancer	16461572	CNVD
Basal-like breast cancer	18066063	CNVD
Effusion lymphoma	18079361	CNVD
Glioblastoma multiforme	19115005	CNVD
Prostate cancer	21147910	CNVD
Lung cancer	21911935	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	22048815	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Glioblastoma multiforme	19435819	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cervical cancer	21062161	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	24453001	CNVD
Breast cancer	16608533	CNVD
Melanoma	20877625	CNVD
Non-syndromic sensorineural hearing loss	20020426	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	22065749	CNVD
Cancer	22000013	CNVD
Colon cancer	22065749	CNVD
Endometrial cancer	22065749	CNVD
Lung cancer	20668451	CNVD
Breast cancer	17634833	CNVD
Cancer	20215515	CNVD
Glioblastoma multiforme	21727940	CNVD
Prostate cancer	19363497	CNVD
Prostate cancer	17700571	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cutaneous malignant melanoma	18794153	CNVD
Ovarian cancer	21781307	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Autism	20964600	CNVD
Endometrial cancer	19261849	CNVD
Central neurocytomas	17123091	CNVD
Malignant melanoma	17260012	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1096 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89620400-89628600	Active TSS	Brain Inferior Temporal Lobe	brain
2	chr10:89621000-89627000	Active TSS	HUES64 Cell Line	embryonic stem cell
3	chr10:89621000-89627200	Active TSS	Brain Cingulate Gyrus	brain
4	chr10:89621000-89628000	Active TSS	Brain Hippocampus Middle	brain
5	chr10:89621000-89628600	Active TSS	ES-I3 Cell Line	embryonic stem cell
6	chr10:89621000-89628600	Active TSS	H1 Cell Line	embryonic stem cell
7	chr10:89621200-89625800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr10:89621200-89625800	Active TSS	Left Ventricle	heart
9	chr10:89621200-89625800	Active TSS	Pancreas	Pancrea
10	chr10:89621200-89626400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
11	chr10:89621200-89626400	Active TSS	Fetal Brain Female	brain
12	chr10:89621200-89626800	Active TSS	H9 Cell Line	embryonic stem cell
13	chr10:89621200-89627000	Active TSS	Pancreatic Islets	Pancreatic Islet
14	chr10:89621200-89627400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr10:89621200-89628400	Active TSS	Fetal Stomach	stomach
16	chr10:89621200-89628800	Active TSS	Duodenum Smooth Muscle	Duodenum
17	chr10:89621200-89628800	Active TSS	Fetal Kidney	kidney
18	chr10:89621200-89629000	Active TSS	Right Atrium	heart
19	chr10:89621200-89629000	Active TSS	Right Ventricle	heart
20	chr10:89621200-89630800	Active TSS	Aorta	Aorta
21	chr10:89621400-89625800	Active TSS	Gastric	stomach
22	chr10:89621400-89625800	Active TSS	Small Intestine	intestine
23	chr10:89621400-89626200	Active TSS	HUES48 Cell Line	embryonic stem cell
24	chr10:89621400-89626200	Active TSS	iPS-20b Cell Line	embryonic stem cell
25	chr10:89621400-89626400	Active TSS	iPS-18 Cell Line	embryonic stem cell
26	chr10:89621400-89627200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr10:89621400-89627200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr10:89621400-89627200	Active TSS	HUES6 Cell Line	embryonic stem cell
29	chr10:89621400-89627600	Active TSS	Fetal Lung	lung
30	chr10:89621400-89628000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
31	chr10:89621400-89628200	Active TSS	Hela-S3	cervix
32	chr10:89621400-89628400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr10:89621400-89628400	Active TSS	Fetal Intestine Small	intestine
34	chr10:89621400-89628600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr10:89621400-89628600	Active TSS	iPS-15b Cell Line	embryonic stem cell
36	chr10:89621400-89628600	Active TSS	HSMMtube	muscle
37	chr10:89621400-89628800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr10:89621400-89628800	Active TSS	Muscle Satellite Cultured Cells	--
39	chr10:89621400-89628800	Active TSS	Fetal Intestine Large	intestine
40	chr10:89621400-89628800	Active TSS	K562	blood
41	chr10:89621400-89629000	Active TSS	Psoas Muscle	Psoas
42	chr10:89621400-89629800	Active TSS	Ovary	ovary
43	chr10:89621600-89625600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr10:89621600-89625600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr10:89621600-89625800	Active TSS	Sigmoid Colon	Sigmoid Colon
46	chr10:89621600-89627200	Active TSS	Brain Angular Gyrus	brain
47	chr10:89621600-89627200	Active TSS	Brain Anterior Caudate	brain
48	chr10:89621600-89627200	Active TSS	Fetal Adrenal Gland	Adrenal Gland
49	chr10:89621600-89627800	Active TSS	Primary T killer memory cells from peripheral blood	blood
50	chr10:89621600-89627800	Active TSS	Liver	Liver

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