Variant report

Variant	esv1796693
Chromosome Location	chr7:47786376-47797466
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr7:47789936-47790040	K562	blood:	n/a	n/a
2	CTCF	chr7:47797200-47797350	GM12864	blood:	n/a	n/a
3	CTCF	chr7:47789953-47790084	K562	blood:	n/a	n/a
4	CTCF	chr7:47789940-47790090	Caco-2	colon:	n/a	n/a
5	CTCF	chr7:47789899-47790048	HepG2	liver:	n/a	n/a
6	CTCF	chr7:47789842-47790061	H1-hESC	embryonic stem cell:	n/a	n/a
7	CTCF	chr7:47789920-47790070	HEK293	kidney:	n/a	n/a
8	CTCF	chr7:47789700-47789850	NB4	blood:	n/a	n/a
9	CTCF	chr7:47789952-47790044	H1-hESC	embryonic stem cell:	n/a	n/a
10	EP300	chr7:47790415-47790971	T-47D	breast:	n/a	chr7:47790637-47790651
11	EP300	chr7:47787524-47788055	T-47D	breast:	n/a	n/a
12	EP300	chr7:47787478-47788043	T-47D	breast:	n/a	n/a
13	FOXA1	chr7:47790540-47790879	T-47D	breast:	n/a	n/a
14	FOXA1	chr7:47786744-47787111	T-47D	breast:	n/a	n/a
15	FOXA1	chr7:47790448-47790820	T-47D	breast:	n/a	n/a
16	FOXA1	chr7:47787529-47787984	T-47D	breast:	n/a	n/a
17	FOXA1	chr7:47787516-47787967	T-47D	breast:	n/a	n/a
18	FOXA1	chr7:47797407-47798059	A549	lung:	n/a	chr7:47797920-47797932
19	GATA2	chr7:47786862-47787170	HUVEC	blood vessel:	n/a	n/a
20	GATA2	chr7:47786734-47787286	SH-SY5Y	brain:	n/a	n/a
21	GATA3	chr7:47786789-47787146	SH-SY5Y	brain:	n/a	n/a
22	GATA3	chr7:47787405-47788004	T-47D	breast:	n/a	chr7:47787571-47787588 chr7:47787969-47787979
23	GATA3	chr7:47790464-47791022	T-47D	breast:	n/a	n/a
24	GATA3	chr7:47786745-47787238	T-47D	breast:	n/a	n/a
25	GATA3	chr7:47787433-47788048	T-47D	breast:	n/a	chr7:47787571-47787588 chr7:47787969-47787979
26	GATA3	chr7:47786768-47787240	MCF-7	breast:	n/a	n/a
27	GATA3	chr7:47786691-47787210	T-47D	breast:	n/a	n/a
28	GATA3	chr7:47790435-47790988	T-47D	breast:	n/a	n/a
29	GATA3	chr7:47786561-47787282	MCF-7	breast:	n/a	n/a
30	GATA3	chr7:47786775-47787137	MCF-7	breast:	n/a	n/a
31	MAFF	chr7:47794888-47795212	HepG2	liver:	n/a	chr7:47795037-47795055
32	MAFK	chr7:47794882-47795193	K562	blood:	n/a	chr7:47795043-47795054 chr7:47795034-47795051 chr7:47795038-47795053 chr7:47795043-47795054
33	MAFK	chr7:47794862-47795228	IMR90	lung:	n/a	chr7:47795043-47795054 chr7:47795034-47795051 chr7:47795038-47795053 chr7:47795043-47795054
34	MAFK	chr7:47794860-47795225	HepG2	liver:	n/a	chr7:47795043-47795054 chr7:47795034-47795051 chr7:47795038-47795053 chr7:47795043-47795054
35	MAFK	chr7:47794868-47795212	HepG2	liver:	n/a	chr7:47795043-47795054 chr7:47795034-47795051 chr7:47795038-47795053 chr7:47795043-47795054
36	MAFK	chr7:47794910-47795189	Hela-S3	cervix:	n/a	chr7:47795043-47795054 chr7:47795034-47795051 chr7:47795038-47795053 chr7:47795043-47795054
37	MYC	chr7:47797416-47797903	MCF10A-Er-Src	breast:	n/a	n/a
38	NFYA	chr7:47791312-47791670	K562	blood:	n/a	n/a
39	NFYB	chr7:47791296-47791584	Hela-S3	cervix:	n/a	chr7:47791337-47791352
40	NFYB	chr7:47791193-47791673	GM12878	blood:	n/a	chr7:47791337-47791352
41	NFYB	chr7:47791302-47791716	K562	blood:	n/a	chr7:47791337-47791352
42	NR3C1	chr7:47797387-47797860	A549	lung:	n/a	chr7:47797639-47797655 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797640-47797654 chr7:47797640-47797654 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797656
43	NR3C1	chr7:47797461-47797776	ECC-1	luminal epithelium:	n/a	chr7:47797639-47797655 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797640-47797654 chr7:47797640-47797654 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797656
44	NR3C1	chr7:47797392-47797872	ECC-1	luminal epithelium:	n/a	chr7:47797639-47797655 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797640-47797654 chr7:47797640-47797654 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797656
45	NR3C1	chr7:47797370-47797914	A549	lung:	n/a	chr7:47797639-47797655 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797640-47797654 chr7:47797893-47797902 chr7:47797640-47797654 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797656
46	NR3C1	chr7:47797343-47797898	A549	lung:	n/a	chr7:47797639-47797655 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797640-47797654 chr7:47797640-47797654 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797656
47	NR3C1	chr7:47797319-47797928	A549	lung:	n/a	chr7:47797639-47797655 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797640-47797654 chr7:47797893-47797902 chr7:47797640-47797654 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797656
48	NR3C1	chr7:47797280-47797958	A549	lung:	n/a	chr7:47797639-47797655 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797634-47797660 chr7:47797640-47797654 chr7:47797893-47797902 chr7:47797640-47797654 chr7:47797639-47797655 chr7:47797634-47797660 chr7:47797639-47797656
49	POLR2A	chr7:47787840-47787880	MCF-7	breast:	n/a	n/a
50	POLR2A	chr7:47797457-47798416	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:47788868..47790580-chr7:47796478..47799163,2	MCF-7	breast:
2	chr7:47733692..47735989-chr7:47787740..47790017,2	MCF-7	breast:
3	chr7:47789337..47791664-chr7:47815360..47817822,2	MCF-7	breast:
4	chr7:47788868..47790580-chr7:47796478..47799163,2	MCF-7	breast:

Variant related genes	Relation type
LINC00525	TF binding region

Extended variants
information (count: 456 )
Associated
traits (count: 123 )

Variant overlapped rSNPs/rCNVs (count:456 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9771401	chr7:47786376-47786377	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs151118127	chr7:47786397-47786398	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs563833900	chr7:47786410-47786411	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
4	rs555472443	chr7:47786444-47786445	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
5	rs9769459	chr7:47786445-47786446	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs537915857	chr7:47786472-47786473	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
7	rs140039689	chr7:47786485-47786486	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
8	rs188481011	chr7:47786492-47786493	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
9	rs149823069	chr7:47786565-47786566	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
10	rs550455081	chr7:47786574-47786575	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
11	rs193109489	chr7:47786580-47786581	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
12	rs375992909	chr7:47786643-47786644	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs73327620	chr7:47786675-47786676	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs73327621	chr7:47786680-47786681	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs561626086	chr7:47786704-47786705	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs370305512	chr7:47786746-47786747	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs185553805	chr7:47786800-47786801	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs73327623	chr7:47786810-47786811	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs564145890	chr7:47786900-47786901	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs534539882	chr7:47786909-47786910	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs11971207	chr7:47786915-47786916	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs113549875	chr7:47786916-47786917	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs568061695	chr7:47786925-47786926	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs73327624	chr7:47786926-47786927	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs566804227	chr7:47786969-47786970	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs113499693	chr7:47786977-47786978	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs17172900	chr7:47786985-47786986	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs568884543	chr7:47786990-47786991	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs537827948	chr7:47787020-47787021	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs376138968	chr7:47787160-47787161	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs535355874	chr7:47787178-47787179	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs557865641	chr7:47787191-47787192	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs574930714	chr7:47787198-47787199	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs60947448	chr7:47787215-47787216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs530100940	chr7:47787229-47787230	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs145832655	chr7:47787263-47787264	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs191193534	chr7:47787269-47787270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs184111151	chr7:47787275-47787276	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs111431309	chr7:47787351-47787352	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs188506325	chr7:47787354-47787355	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs555422585	chr7:47787431-47787432	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs182177222	chr7:47787469-47787470	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs116758957	chr7:47787617-47787618	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs1377429	chr7:47787670-47787671	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs564210721	chr7:47787680-47787681	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs532882202	chr7:47787692-47787693	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs540424003	chr7:47787702-47787703	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs1377430	chr7:47787707-47787708	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs185175543	chr7:47787779-47787780	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs548895216	chr7:47787782-47787783	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:123)

Disease	PMID	Source
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Biliary cancer	19435499	CNVD
Wilms tumour	21544195	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Lung cancer	18438408	CNVD
lymphocytic leukemia	21291569	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Autism	22495311	CNVD
Glioblastoma multiforme	18628472	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21364760	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	17237825	CNVD
Gastric cancer	24379144	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Abnormal phenotypes	18644119	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Esophageal cancer	21851588	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Non-small cell lung cancer	17643093	CNVD
Ovarian cancer	18182111	CNVD
Colorectal cancer	16272173	CNVD
Glioblastoma multiforme	17369134	CNVD
Barrett''s esophagus	18559552	CNVD
head and neck squamous cell carcinoma	16943533	CNVD
Anaplastic thyroid cancer	17079354	CNVD
Basal-like breast cancer	17875215	CNVD
Colorectal cancer	16882699	CNVD
Colorectal cancer	18794099	CNVD
Gastrointestinal stromal cancer	17643098	CNVD
Lung cancer	18381415	CNVD
Metastatic colorectal cancer	17664472	CNVD
Non-small cell lung cancer	19255323	CNVD
Non-small cell lung cancer	17673923	CNVD
Non-small cell lung cancer	17975165	CNVD
Non-small cell lung cancer	19622585	CNVD
Ovarian cancer	16607561	CNVD
Squamous cell cancer	19670535	CNVD
head and neck squamous cell carcinoma	16818711	CNVD
small cell lung cancer	18829487	CNVD
Breast cancer	17661082	CNVD
Adenocarcinoma	19260752	CNVD
Esophageal cancer	16575012	CNVD
Lung adenocarcinoma	19138956	CNVD
Lung adenocarcinoma	18379350	CNVD
Lung adenocarcinoma	18258923	CNVD
Lung cancer	19138956	CNVD
Lung cancer	18379350	CNVD
Lung cancer	18258923	CNVD
Non-small cell lung cancer	18304967	CNVD
Non-small cell lung cancer	19451690	CNVD
Non-small cell lung cancer	19260752	CNVD
Non-small cell lung cancer	17079354	CNVD
Non-small cell lung cancer	18559607	CNVD
Rectal cancer	19506820	CNVD
Triple-negative breast cancer	18950515	CNVD
head and neck squamous cell carcinoma	18813952	CNVD
Non-small cell lung cancer	17504988	CNVD
Non-small cell lung cancer	16943533	CNVD
Non-small cell lung cancer	18509184	CNVD
head and neck squamous cell carcinoma	17538160	CNVD
Colorectal cancer	19712476	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Lung cancer	19671679	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	16864856	CNVD
Pancreatic cancer	17952125	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:84 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:47774400-47802600	Weak transcription	Pancreas	Pancrea
2	chr7:47781800-47795400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr7:47784000-47787600	Weak transcription	HepG2	liver
4	chr7:47784200-47787800	Weak transcription	A549	lung
5	chr7:47786200-47787200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr7:47786400-47786600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
7	chr7:47786400-47787000	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr7:47786400-47787000	Enhancers	HMEC	breast
9	chr7:47786800-47787000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr7:47787000-47790600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr7:47787000-47796400	Weak transcription	HMEC	breast
12	chr7:47787000-47796800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr7:47787600-47788400	Enhancers	HepG2	liver
14	chr7:47787800-47788200	Enhancers	A549	lung
15	chr7:47787800-47788400	Enhancers	Placenta	Placenta
16	chr7:47788000-47788200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr7:47788200-47795000	Weak transcription	A549	lung
18	chr7:47788400-47790600	Weak transcription	Placenta	Placenta
19	chr7:47790600-47790800	Enhancers	Primary T cells from cord blood	blood
20	chr7:47790600-47791200	Enhancers	Placenta	Placenta
21	chr7:47790600-47791200	Enhancers	Fetal Thymus	thymus
22	chr7:47790800-47791000	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr7:47790800-47791200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
24	chr7:47791000-47791200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr7:47794000-47794200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr7:47794000-47794200	Enhancers	Osteobl	bone
27	chr7:47794000-47794400	Enhancers	Liver	Liver
28	chr7:47794000-47795600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr7:47794200-47796400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr7:47794800-47796200	Weak transcription	Osteobl	bone
31	chr7:47795000-47795600	Enhancers	A549	lung
32	chr7:47795400-47795600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr7:47795400-47796400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr7:47795600-47795800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr7:47795600-47795800	Enhancers	Ovary	ovary
36	chr7:47795600-47796000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr7:47795600-47797200	Weak transcription	A549	lung
38	chr7:47795800-47797200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr7:47796000-47797200	Weak transcription	Ovary	ovary
40	chr7:47796000-47797800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr7:47796200-47797000	Enhancers	Muscle Satellite Cultured Cells	--
42	chr7:47796200-47798600	Enhancers	NH-A	brain
43	chr7:47796200-47799000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr7:47796200-47799000	Enhancers	Osteobl	bone
45	chr7:47796400-47797200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr7:47796400-47797800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr7:47796400-47799400	Enhancers	HMEC	breast
48	chr7:47796800-47799400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr7:47797000-47797400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
50	chr7:47797000-47797800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links