Variant report

Variant esv1796699
Chromosome Location chr3:20278414-20335900
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:20276600-20278600 Enhancers Liver Liver
2 chr3:20278000-20278600 Enhancers Fetal Intestine Large intestine
3 chr3:20278000-20278600 Enhancers Stomach Mucosa stomach
4 chr3:20278400-20282200 Weak transcription Fetal Intestine Small intestine
5 chr3:20278600-20282000 Weak transcription Liver Liver
6 chr3:20281200-20282400 Enhancers Ovary ovary
7 chr3:20281400-20282800 Enhancers Aorta Aorta
8 chr3:20281600-20282000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr3:20281600-20282000 Enhancers Spleen Spleen
10 chr3:20281600-20282600 Enhancers Esophagus oesophagus
11 chr3:20282800-20284000 Weak transcription Aorta Aorta
12 chr3:20284000-20284200 Enhancers Aorta Aorta
13 chr3:20287200-20289000 Enhancers GM12878-XiMat blood
14 chr3:20291800-20292200 Enhancers HUES6 Cell Line embryonic stem cell
15 chr3:20291800-20292400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
16 chr3:20291800-20292400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr3:20291800-20293400 Enhancers H1 Cell Line embryonic stem cell
18 chr3:20291800-20293400 Enhancers H9 Cell Line embryonic stem cell
19 chr3:20291800-20293600 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr3:20292000-20292200 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr3:20292000-20293200 Enhancers ES-WA7 Cell Line embryonic stem cell
22 chr3:20292000-20293200 Enhancers HUES48 Cell Line embryonic stem cell
23 chr3:20292000-20293200 Enhancers HUES64 Cell Line embryonic stem cell
24 chr3:20292000-20293200 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr3:20292200-20292400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
26 chr3:20292200-20292400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
27 chr3:20292200-20292800 Enhancers Cortex derived primary cultured neurospheres brain
28 chr3:20292200-20293400 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr3:20292200-20293400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
30 chr3:20292400-20292600 Enhancers HUES6 Cell Line embryonic stem cell
31 chr3:20292400-20292800 Active TSS iPS-20b Cell Line embryonic stem cell
32 chr3:20292400-20293200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr3:20292400-20296000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr3:20292600-20292800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
35 chr3:20292600-20293200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr3:20292600-20296800 Weak transcription Ovary ovary
37 chr3:20292800-20293000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
38 chr3:20292800-20293600 Enhancers HUES6 Cell Line embryonic stem cell
39 chr3:20293000-20293200 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr3:20293200-20293400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr3:20293400-20295600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr3:20293400-20295800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr3:20293600-20295600 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr3:20293600-20297600 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr3:20295600-20296200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
46 chr3:20295600-20296400 Enhancers HUES6 Cell Line embryonic stem cell
47 chr3:20295800-20296000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
48 chr3:20295800-20296200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr3:20295800-20296200 Active TSS A549 lung
50 chr3:20295800-20296400 Active TSS Hela-S3 cervix

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