Variant report

Variant	esv1797198
Chromosome Location	chr11:65637273-65642343
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:621)
CpG islands
(count:916)
Chromatin interactive
region (count:16)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:621 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr11:65641014-65641356	GM12878	blood:	n/a	n/a
2	ATF3	chr11:65641111-65641417	H1-hESC	embryonic stem cell:	n/a	chr11:65641272-65641292 chr11:65641160-65641180
3	ATF3	chr11:65641155-65641393	H1-hESC	embryonic stem cell:	n/a	chr11:65641272-65641292 chr11:65641160-65641180
4	ATF3	chr11:65641113-65641434	K562	blood:	n/a	chr11:65641272-65641292 chr11:65641160-65641180
5	BACH1	chr11:65641048-65641403	H1-hESC	embryonic stem cell:	n/a	n/a
6	BCL3	chr11:65640885-65641455	GM12878	blood:	n/a	n/a
7	BCL3	chr11:65636004-65637388	A549	lung:	n/a	n/a
8	BCL3	chr11:65640736-65641544	A549	lung:	n/a	n/a
9	BCL3	chr11:65636960-65637395	GM12878	blood:	n/a	n/a
10	BCL3	chr11:65640862-65641506	A549	lung:	n/a	n/a
11	BCLAF1	chr11:65640997-65641508	GM12878	blood:	n/a	n/a
12	BHLHE40	chr11:65640916-65641449	K562	blood:	n/a	n/a
13	BHLHE40	chr11:65640936-65641500	HepG2	liver:	n/a	n/a
14	BHLHE40	chr11:65640860-65641489	GM12878	blood:	n/a	n/a
15	BRCA1	chr11:65641004-65641006	GM12878	blood:	n/a	n/a
16	BRCA1	chr11:65641010-65641297	Hela-S3	cervix:	n/a	n/a
17	CBX3	chr11:65640800-65641482	K562	blood:	n/a	n/a
18	CCNT2	chr11:65640905-65641401	K562	blood:	n/a	n/a
19	CEBPB	chr11:65641178-65641422	H1-hESC	embryonic stem cell:	n/a	n/a
20	CEBPB	chr11:65640082-65640244	IMR90	lung:	n/a	n/a
21	CEBPD	chr11:65640880-65641313	HepG2	liver:	n/a	n/a
22	CHD2	chr11:65641101-65641301	H1-hESC	embryonic stem cell:	n/a	n/a
23	CHD2	chr11:65641006-65641304	HepG2	liver:	n/a	n/a
24	CHD2	chr11:65638261-65638485	HepG2	liver:	n/a	n/a
25	CHD2	chr11:65640837-65641352	GM12878	blood:	n/a	n/a
26	CHD2	chr11:65640917-65641390	Hela-S3	cervix:	n/a	n/a
27	CREB1	chr11:65640690-65641503	HepG2	liver:	n/a	n/a
28	CREB1	chr11:65640836-65641464	A549	lung:	n/a	n/a
29	CREB1	chr11:65640863-65641442	H1-hESC	embryonic stem cell:	n/a	n/a
30	CREB1	chr11:65640798-65641502	GM12878	blood:	n/a	n/a
31	CTBP2	chr11:65640955-65641390	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr11:65639720-65639870	AG04449	skin:	n/a	n/a
33	CTCF	chr11:65639720-65639870	HPF	lung:	n/a	n/a
34	CTCF	chr11:65639740-65639890	HCPEpiC	choroid plexus:	n/a	n/a
35	CTCF	chr11:65639652-65639933	IMR90	lung:	n/a	n/a
36	CTCF	chr11:65639720-65639870	HEEpiC	esophagus:	n/a	n/a
37	CTCF	chr11:65639680-65639830	HepG2	liver:	n/a	n/a
38	CTCF	chr11:65639760-65639910	HFF	foreskin:	n/a	n/a
39	CTCF	chr11:65639777-65639825	ProgFib	skin:	n/a	n/a
40	CTCF	chr11:65639745-65639860	Fibrobl	skin:	n/a	n/a
41	CTCF	chr11:65639700-65639850	HepG2	liver:	n/a	n/a
42	CTCF	chr11:65639720-65639870	AG10803	skin:	n/a	n/a
43	CTCF	chr11:65639700-65639850	HRE	kidney:	n/a	n/a
44	CTCF	chr11:65639760-65639910	SAEC	small airway:	n/a	n/a
45	CTCF	chr11:65639720-65639870	SAEC	small airway:	n/a	n/a
46	CTCF	chr11:65639700-65639850	AG04450	lung:	n/a	n/a
47	CTCF	chr11:65639720-65639870	HBMEC	blood vessel:	n/a	n/a
48	CTCF	chr11:65639720-65639870	HCFaa	heart:	n/a	n/a
49	CTCF	chr11:65639680-65639830	HPAF	blood vessel:	n/a	n/a
50	CTCF	chr11:65639740-65639890	WERI-Rb-1	eye:	n/a	n/a

(count:916 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:65640486-65640536	MCF-7	breast:	n/a
2	chr11:65640486-65640536	MCF-7	breast:	n/a
3	chr11:65641035-65641085	AG09319	gingival:	n/a
4	chr11:65641035-65641085	GM19239	blood:	n/a
5	chr11:65640939-65640989	AG09309	skin:	n/a
6	chr11:65640447-65640497	GM12892	blood:	n/a
7	chr11:65640486-65640536	AG04450	lung:	fetal
8	chr11:65641035-65641085	HEK293	kidney:	embryo
9	chr11:65641335-65641385	HEK293	kidney:	embryo
10	chr11:65641445-65641495	ovcar-3	ovarian:	n/a
11	chr11:65641043-65641093	AG04449	skin:	fetal
12	chr11:65640137-65640187	PFSK-1	brain:	n/a
13	chr11:65638483-65638533	AG04450	lung:	fetal
14	chr11:65640939-65640989	MCF10A-Er-Src	breast:	n/a
15	chr11:65639869-65639919	ProgFib	skin:	n/a
16	chr11:65640137-65640187	A549	lung:	n/a
17	chr11:65639869-65639919	Caco-2	colon:	n/a
18	chr11:65640516-65640566	AG09319	gingival:	n/a
19	chr11:65640486-65640536	MCF10A-Er-Src	breast:	n/a
20	chr11:65640447-65640497	HIPEpiC	eye:	n/a
21	chr11:65641043-65641093	HRCEpiC	kidney:	n/a
22	chr11:65640137-65640187	ECC-1	luminal epithelium:	n/a
23	chr11:65640939-65640989	HPAEpiC	pulmonary alveolar:	n/a
24	chr11:65641174-65641224	HRCEpiC	kidney:	n/a
25	chr11:65641174-65641224	A549	lung:	n/a
26	chr11:65639798-65639848	HPAEpiC	pulmonary alveolar:	n/a
27	chr11:65640375-65640425	GM12891	blood:	n/a
28	chr11:65639798-65639848	GM19239	blood:	n/a
29	chr11:65640486-65640536	SK-N-SH_RA	brain:	n/a
30	chr11:65641335-65641385	PFSK-1	brain:	n/a
31	chr11:65641174-65641224	HEK293	kidney:	embryo
32	chr11:65641445-65641495	PrEC	prostate:	n/a
33	chr11:65639798-65639848	AG10803	skin:	n/a
34	chr11:65641174-65641224	SK-N-MC	brain:	n/a
35	chr11:65638483-65638533	HL-60	blood:	n/a
36	chr11:65639869-65639919	NH-A	brain:	n/a
37	chr11:65640375-65640425	HEEpiC	esophagus:	n/a
38	chr11:65639869-65639919	AG09309	skin:	n/a
39	chr11:65640333-65640383	SAEC	small airway:	n/a
40	chr11:65640375-65640425	HIPEpiC	eye:	n/a
41	chr11:65641335-65641385	SK-N-MC	brain:	n/a
42	chr11:65640516-65640566	HNPCEpiC	eye:	n/a
43	chr11:65641043-65641093	HCF	heart:	n/a
44	chr11:65640516-65640566	U87	brain:	n/a
45	chr11:65641335-65641385	HCPEpiC	choroid plexus:	n/a
46	chr11:65641335-65641385	HRCEpiC	kidney:	n/a
47	chr11:65641445-65641495	GM06990	blood:	n/a
48	chr11:65640516-65640566	ECC-1	luminal epithelium:	n/a
49	chr11:65639869-65639919	HRE	kidney:	n/a
50	chr11:65639798-65639848	HCM	heart:	n/a

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:65547235..65549033-chr11:65639667..65642031,2	K562	blood:
2	chr11:65639484..65641571-chr8:144697740..144699528,2	MCF-7	breast:
3	chr11:65635925..65638559-chr11:65769134..65770863,2	MCF-7	breast:
4	chr11:65640630..65641247-chr17:74733481..74734278,2	Hela-S3	cervix:
5	chr11:65477979..65480813-chr11:65636240..65639820,3	K562	blood:
6	chr11:65642046..65643611-chr7:5563687..5566581,2	K562	blood:
7	chr11:65402996..65404560-chr11:65635320..65637558,2	K562	blood:
8	chr11:65482061..65486231-chr11:65638918..65641829,3	K562	blood:
9	chr11:65640551..65642134-chr11:65685115..65687811,2	MCF-7	breast:
10	chr11:65627395..65628004-chr11:65640671..65641318,2	Hela-S3	cervix:
11	chr11:65382643..65384929-chr11:65635582..65638350,2	K562	blood:
12	chr11:65638377..65641229-chr11:65727913..65730693,2	MCF-7	breast:
13	chr11:65638895..65641565-chr11:65834356..65837225,2	K562	blood:
14	chr11:65478490..65481819-chr11:65637441..65641209,4	K562	blood:
15	chr11:65485320..65488202-chr11:65635523..65638035,2	K562	blood:
16	chr11:65636578..65639381-chr11:65766938..65769474,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CFL1-3	chr11:65638887-65639489	NONHSAT022239
2	lnc-CFL1-3	chr11:65639715-65639832	NONHSAT022239
3	lnc-CFL1-3	chr11:65640154-65640243	NONHSAT022239

No data

Variant related genes	Relation type
CTSW	TF binding region
EFEMP2	TF binding region
CTSW	CpG island
EFEMP2	CpG island
ENSG00000172732	chromatin interactions
ENSG00000173327	chromatin interactions
ENSG00000197136	chromatin interactions
ENSG00000175467	chromatin interactions
ENSG00000175550	chromatin interactions
ENSG00000175827	chromatin interactions
ENSG00000175573	chromatin interactions
ENSG00000255038	chromatin interactions
ENSG00000175334	chromatin interactions
ENSG00000266041	chromatin interactions
ENSG00000104522	chromatin interactions
ENSG00000175376	chromatin interactions
ENSG00000092931	chromatin interactions
ENSG00000172922	chromatin interactions
ENSG00000172977	chromatin interactions
ENSG00000254470	chromatin interactions

Extended variants
information (count: 214 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:214 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs501630	chr11:65637273-65637274	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs377106560	chr11:65637291-65637292	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
3	rs369000940	chr11:65637317-65637318	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
4	rs373202527	chr11:65637331-65637332	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
5	rs376137600	chr11:65637335-65637336	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
6	rs2234467	chr11:65637341-65637342	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs144958894	chr11:65637368-65637369	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
8	rs397514683	chr11:65637376-65637377	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
9	rs371117990	chr11:65637410-65637411	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
10	rs199606204	chr11:65637416-65637417	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
11	rs546162289	chr11:65637427-65637428	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
12	rs193302864	chr11:65637447-65637448	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
13	rs577950376	chr11:65637450-65637451	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
14	rs200342705	chr11:65637469-65637470	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
15	rs2234466	chr11:65637482-65637483	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
16	rs552718193	chr11:65637483-65637484	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
17	rs2234465	chr11:65637486-65637487	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
18	rs2234464	chr11:65637534-65637535	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
19	rs573510987	chr11:65637536-65637537	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
20	rs553211572	chr11:65637546-65637547	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
21	rs571631117	chr11:65637574-65637575	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs193302870	chr11:65637622-65637623	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
23	rs1043355	chr11:65637626-65637627	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
24	rs145853251	chr11:65637629-65637630	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs562466098	chr11:65637630-65637631	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
26	rs148940436	chr11:65637634-65637635	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
27	rs570927073	chr11:65637635-65637636	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
28	rs143662598	chr11:65637645-65637646	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
29	rs148075092	chr11:65637688-65637689	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
30	rs141310608	chr11:65637693-65637694	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
31	rs35726936	chr11:65637698-65637699	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs145037272	chr11:65637703-65637704	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs367645893	chr11:65637723-65637724	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs149021732	chr11:65637730-65637731	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs200648492	chr11:65637736-65637737	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs570696654	chr11:65637737-65637738	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs564935293	chr11:65637744-65637745	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs370392978	chr11:65637747-65637748	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs374413025	chr11:65637754-65637755	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
40	rs147124207	chr11:65637773-65637774	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
41	rs547514733	chr11:65637804-65637805	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs78165274	chr11:65637812-65637813	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs2234463	chr11:65637846-65637847	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs111927255	chr11:65637887-65637888	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs569328716	chr11:65637910-65637911	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs72924781	chr11:65637919-65637920	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs200069197	chr11:65637965-65637966	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
48	rs374498682	chr11:65637977-65637978	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
49	rs630394	chr11:65637984-65637985	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs372863827	chr11:65638015-65638016	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Prostate cancer	18779856	CNVD
Cancer	17160897	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:756 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:65628800-65639600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr11:65629000-65639600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr11:65629400-65638600	Weak transcription	Right Atrium	heart
4	chr11:65629600-65637400	Strong transcription	Ovary	ovary
5	chr11:65629600-65637600	Strong transcription	Placenta Amnion	Placenta Amnion
6	chr11:65629600-65638000	Strong transcription	Fetal Lung	lung
7	chr11:65630000-65637800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr11:65630000-65637800	Strong transcription	Muscle Satellite Cultured Cells	--
9	chr11:65630000-65637800	Strong transcription	Osteobl	bone
10	chr11:65630000-65638200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
11	chr11:65630000-65638400	Strong transcription	Fetal Intestine Small	intestine
12	chr11:65630200-65637600	Strong transcription	HSMMtube	muscle
13	chr11:65630600-65637800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr11:65630600-65637800	Strong transcription	Skeletal Muscle Male	skeletal muscle
15	chr11:65631000-65637400	Strong transcription	Adipose Nuclei	Adipose
16	chr11:65631000-65637400	Strong transcription	Duodenum Smooth Muscle	Duodenum
17	chr11:65631200-65637600	Strong transcription	Right Ventricle	heart
18	chr11:65631200-65638000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
19	chr11:65631600-65638000	Strong transcription	HSMM	muscle
20	chr11:65632000-65637800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr11:65632200-65638000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr11:65632200-65639400	Weak transcription	Fetal Kidney	kidney
23	chr11:65633000-65638200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr11:65633000-65639400	Weak transcription	Psoas Muscle	Psoas
25	chr11:65633200-65639200	Weak transcription	Stomach Mucosa	stomach
26	chr11:65633400-65638000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
27	chr11:65633400-65638200	Weak transcription	HUVEC	blood vessel
28	chr11:65633400-65640600	Weak transcription	Hela-S3	cervix
29	chr11:65633600-65638000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr11:65633600-65638000	Weak transcription	GM12878-XiMat	blood
31	chr11:65633600-65638200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
32	chr11:65633600-65639400	Weak transcription	Brain Angular Gyrus	brain
33	chr11:65633600-65640400	Weak transcription	HMEC	breast
34	chr11:65633800-65637600	Weak transcription	Primary B cells from cord blood	blood
35	chr11:65633800-65639200	Weak transcription	Rectal Mucosa Donor 31	rectum
36	chr11:65634200-65638200	Weak transcription	Primary T helper cells PMA-I stimulated	--
37	chr11:65634400-65638200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
38	chr11:65634400-65638800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr11:65634400-65639600	Weak transcription	Brain Inferior Temporal Lobe	brain
40	chr11:65634800-65638000	Weak transcription	Primary B cells from peripheral blood	blood
41	chr11:65634800-65638200	Weak transcription	Pancreas	Pancrea
42	chr11:65634800-65639200	Weak transcription	Brain Substantia Nigra	brain
43	chr11:65634800-65639600	Weak transcription	Brain Hippocampus Middle	brain
44	chr11:65634800-65640400	Weak transcription	Primary T cells from cord blood	blood
45	chr11:65635000-65638000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
46	chr11:65635000-65638000	Weak transcription	Esophagus	oesophagus
47	chr11:65635000-65638600	Weak transcription	Colonic Mucosa	Colon
48	chr11:65635000-65639800	Weak transcription	Small Intestine	intestine
49	chr11:65635000-65640000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr11:65635200-65637600	Weak transcription	Gastric	stomach

The 2.0 version of rSNPBase

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