Variant report

Variant	esv1797873
Chromosome Location	chr7:25606956-25615898
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:25608534-25608799	K562	blood:	n/a	n/a
2	ARID3A	chr7:25608009-25608865	HepG2	liver:	n/a	n/a
3	ATF1	chr7:25608157-25608836	K562	blood:	n/a	n/a
4	BACH1	chr7:25608673-25608795	K562	blood:	n/a	n/a
5	BHLHE40	chr7:25608184-25608761	A549	lung:	n/a	n/a
6	BHLHE40	chr7:25608040-25608849	HepG2	liver:	n/a	n/a
7	BHLHE40	chr7:25608156-25608401	HepG2	liver:	n/a	n/a
8	BHLHE40	chr7:25608186-25608493	HepG2	liver:	n/a	n/a
9	BHLHE40	chr7:25608114-25608813	K562	blood:	n/a	n/a
10	BRCA1	chr7:25611641-25611759	GM12878	blood:	n/a	n/a
11	CBX3	chr7:25608127-25608926	HCT-116	colon:	n/a	n/a
12	CBX3	chr7:25608095-25608803	K562	blood:	n/a	n/a
13	CEBPB	chr7:25608502-25608749	K562	blood:	n/a	n/a
14	CHD1	chr7:25608644-25608665	GM12878	blood:	n/a	n/a
15	CREB1	chr7:25607934-25608880	HepG2	liver:	n/a	n/a
16	CREB1	chr7:25608148-25608387	A549	lung:	n/a	n/a
17	CREB1	chr7:25608078-25608416	A549	lung:	n/a	n/a
18	CREB1	chr7:25608444-25608890	H1-hESC	embryonic stem cell:	n/a	n/a
19	CREB1	chr7:25608469-25608898	H1-hESC	embryonic stem cell:	n/a	n/a
20	CTCF	chr7:25608542-25608836	K562	blood:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
21	CTCF	chr7:25608600-25608750	GM12875	blood:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
22	CTCF	chr7:25608640-25608790	GM12866	blood:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
23	CTCF	chr7:25608660-25608810	AG04450	lung:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
24	CTCF	chr7:25608580-25608730	BJ	skin:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
25	CTCF	chr7:25608640-25608790	WI-38	lung:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
26	CTCF	chr7:25608620-25608770	GM12866	blood:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
27	CTCF	chr7:25608640-25608790	RPTEC	kidney:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
28	CTCF	chr7:25608583-25608818	Pancreas_OC	pancreas:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
29	CTCF	chr7:25607849-25609048	A549	lung:	n/a	chr7:25608687-25608696 chr7:25608392-25608400 chr7:25608682-25608698 chr7:25608681-25608699
30	CTCF	chr7:25608580-25608730	HAc	cerebellar:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
31	CTCF	chr7:25608620-25608770	HCPEpiC	choroid plexus:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
32	CTCF	chr7:25608600-25608750	HCFaa	heart:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
33	CTCF	chr7:25608566-25608820	H1-hESC	embryonic stem cell:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
34	CTCF	chr7:25608580-25608730	BE2_C	brain:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
35	CTCF	chr7:25608620-25608770	GM06990	blood:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
36	CTCF	chr7:25608556-25608842	Gliobla	brain:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
37	CTCF	chr7:25608620-25608770	WERI-Rb-1	eye:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
38	CTCF	chr7:25608640-25608790	AG09309	skin:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
39	CTCF	chr7:25608620-25608770	Caco-2	colon:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
40	CTCF	chr7:25608580-25608730	HA-sp	spinal cord:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
41	CTCF	chr7:25608432-25608943	MCF-7	breast:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
42	CTCF	chr7:25608620-25608770	GM12801	blood:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
43	CTCF	chr7:25608500-25608650	HFF-Myc	foreskin:	n/a	n/a
44	CTCF	chr7:25608620-25608770	AoAF	blood vessel:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
45	CTCF	chr7:25608558-25608774	SK-N-SH_RA	brain:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
46	CTCF	chr7:25608640-25608790	GM12872	blood:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
47	CTCF	chr7:25608220-25608370	GM12870	blood:	n/a	n/a
48	CTCF	chr7:25608620-25608770	HPAF	blood vessel:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699
49	CTCF	chr7:25608540-25608690	BE2_C	brain:	n/a	n/a
50	CTCF	chr7:25608560-25608710	AG09319	gingival:	n/a	chr7:25608687-25608696 chr7:25608682-25608698 chr7:25608681-25608699

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:25608673-25608723	BE2_C	brain:	n/a
2	chr7:25608323-25608373	IMR90	lung:	fetal
3	chr7:25608323-25608373	AG09309	skin:	n/a
4	chr7:25608634-25608684	SKMC	muscle:	n/a
5	chr7:25608634-25608684	SK-N-SH	brain:	n/a
6	chr7:25608634-25608684	HPAEpiC	pulmonary alveolar:	n/a
7	chr7:25608673-25608723	HEEpiC	esophagus:	n/a
8	chr7:25608305-25608355	BE2_C	brain:	n/a
9	chr7:25608634-25608684	ECC-1	luminal epithelium:	n/a
10	chr7:25608634-25608684	NHBE	bronchial:	n/a
11	chr7:25608323-25608373	HCPEpiC	choroid plexus:	n/a
12	chr7:25608305-25608355	PANC-1	pancreas:	n/a
13	chr7:25608305-25608355	AG09319	gingival:	n/a
14	chr7:25608673-25608723	LNCaP	prostate:	n/a
15	chr7:25608323-25608373	GM06990	blood:	n/a
16	chr7:25608673-25608723	NT2-D1	testis:	n/a
17	chr7:25608634-25608684	LNCaP	prostate:	n/a
18	chr7:25608305-25608355	HL-60	blood:	n/a
19	chr7:25608634-25608684	RPTEC	kidney:	n/a
20	chr7:25608305-25608355	SK-N-MC	brain:	n/a
21	chr7:25608673-25608723	T-47D	breast:	n/a
22	chr7:25608673-25608723	SAEC	small airway:	n/a
23	chr7:25608323-25608373	SK-N-SH_RA	brain:	n/a
24	chr7:25608634-25608684	HAEpiC	amniotic membrane:	n/a
25	chr7:25608305-25608355	NH-A	brain:	n/a
26	chr7:25608634-25608684	PrEC	prostate:	n/a
27	chr7:25608305-25608355	SKMC	muscle:	n/a
28	chr7:25608323-25608373	PrEC	prostate:	n/a
29	chr7:25608634-25608684	U87	brain:	n/a
30	chr7:25608305-25608355	AG04449	skin:	fetal
31	chr7:25608305-25608355	GM12892	blood:	n/a
32	chr7:25608634-25608684	HMEC	breast:	n/a
33	chr7:25608634-25608684	HRE	kidney:	n/a
34	chr7:25608323-25608373	HepG2	liver:	n/a
35	chr7:25608634-25608684	HL-60	blood:	n/a
36	chr7:25608305-25608355	K562	blood:	n/a
37	chr7:25608673-25608723	HIPEpiC	eye:	n/a
38	chr7:25608305-25608355	BJ	skin:	n/a
39	chr7:25608323-25608373	LNCaP	prostate:	n/a
40	chr7:25608673-25608723	GM06990	blood:	n/a
41	chr7:25608673-25608723	NB4	blood:	n/a
42	chr7:25608305-25608355	ECC-1	luminal epithelium:	n/a
43	chr7:25608673-25608723	CMK	blood:	n/a
44	chr7:25608673-25608723	MCF10A-Er-Src	breast:	n/a
45	chr7:25608305-25608355	PrEC	prostate:	n/a
46	chr7:25608305-25608355	SAEC	small airway:	n/a
47	chr7:25608323-25608373	AG04450	lung:	fetal
48	chr7:25608634-25608684	GM12878	blood:	n/a
49	chr7:25608305-25608355	A549	lung:	n/a
50	chr7:25608634-25608684	HNPCEpiC	eye:	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:25430634..25431513-chr7:25608350..25609015,3	MCF-7	breast:
2	chr7:25608970..25611945-chr7:25612045..25614894,3	MCF-7	breast:
3	chr7:25614579..25616228-chr7:25892925..25895334,2	K562	blood:
4	chr7:25430704..25431525-chr7:25608219..25609114,4	K562	blood:
5	chr7:25256547..25257067-chr7:25608230..25609163,2	K562	blood:
6	chr7:25299061..25300348-chr7:25608226..25609143,4	K562	blood:
7	chr7:25615799..25617345-chr7:25621059..25622921,2	K562	blood:
8	chr7:25608198..25609026-chr7:25891099..25891911,6	MCF-7	breast:
9	chr7:25429098..25432014-chr7:25608292..25610212,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NPVF-4	chr7:25607521-25607592	XLOC_006381

Variant related genes	Relation type
ENSG00000222101	TF binding region
ENSG00000222101	CpG island
ENSG00000222101	chromatin interactions

Extended variants
information (count: 409 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:409 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2960821	chr7:25606956-25606957	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs190116789	chr7:25606960-25606961	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs531446468	chr7:25607021-25607022	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs142005589	chr7:25607024-25607025	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs12534642	chr7:25607045-25607046	Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
6	rs527246117	chr7:25607081-25607082	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs80226696	chr7:25607138-25607139	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs553837610	chr7:25607139-25607140	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs117625209	chr7:25607140-25607141	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs529744866	chr7:25607152-25607153	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs142055231	chr7:25607155-25607156	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs569453509	chr7:25607156-25607157	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs538477098	chr7:25607179-25607180	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs558457672	chr7:25607186-25607187	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs573306742	chr7:25607204-25607205	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs28394819	chr7:25607205-25607206	Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs181647164	chr7:25607224-25607225	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs553887010	chr7:25607232-25607233	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs574017552	chr7:25607240-25607241	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs151177727	chr7:25607241-25607242	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs556264738	chr7:25607253-25607254	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs575817049	chr7:25607378-25607379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs544818946	chr7:25607408-25607409	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs369583046	chr7:25607467-25607468	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs558764760	chr7:25607494-25607495	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs12669889	chr7:25607505-25607506	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs527593936	chr7:25607525-25607526	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
28	rs541357887	chr7:25607567-25607568	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
29	rs560719788	chr7:25607588-25607589	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
30	rs529742870	chr7:25607597-25607598	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs368878198	chr7:25607641-25607642	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs149488735	chr7:25607669-25607670	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs57748391	chr7:25607684-25607685	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs201191958	chr7:25607702-25607703	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs77781336	chr7:25607703-25607704	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs201648370	chr7:25607708-25607709	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs549887904	chr7:25607738-25607739	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs187299663	chr7:25607753-25607754	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs531917042	chr7:25607775-25607776	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs201000065	chr7:25607783-25607784	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs11973605	chr7:25607805-25607806	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs190441676	chr7:25607869-25607870	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs115737886	chr7:25607879-25607880	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs140168164	chr7:25607920-25607921	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs11973587	chr7:25607939-25607940	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs147196696	chr7:25607959-25607960	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs368080380	chr7:25607960-25607961	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs73085906	chr7:25607970-25607971	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs74911485	chr7:25607973-25607974	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs556203765	chr7:25607977-25607978	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Non-syndromic sensorineural hearing loss	22570644	CNVD
Cancer	21183584	CNVD
abnormal development	18461090	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Colorectal cancer	16774939	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Lung adenocarcinoma	17086460	CNVD
Colorectal cancer	19455253	CNVD
Lung cancer	17086460	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:25604600-25608200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr7:25604800-25608200	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr7:25605400-25607000	Enhancers	Stomach Mucosa	stomach
4	chr7:25606000-25607400	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr7:25606200-25608000	Weak transcription	Fetal Lung	lung
6	chr7:25606600-25607000	Enhancers	Gastric	stomach
7	chr7:25606800-25607000	Enhancers	Rectal Smooth Muscle	rectum
8	chr7:25607000-25607800	Weak transcription	Stomach Mucosa	stomach
9	chr7:25607400-25608000	Enhancers	Rectal Mucosa Donor 31	rectum
10	chr7:25607800-25608800	Enhancers	Stomach Mucosa	stomach
11	chr7:25608000-25608200	Enhancers	Liver	Liver
12	chr7:25608000-25608200	Enhancers	Colon Smooth Muscle	Colon
13	chr7:25608000-25608200	Enhancers	Pancreatic Islets	Pancreatic Islet
14	chr7:25608000-25608200	Enhancers	HepG2	liver
15	chr7:25608000-25608200	Enhancers	K562	blood
16	chr7:25608000-25608400	Enhancers	Fetal Heart	heart
17	chr7:25608000-25608400	Enhancers	Fetal Lung	lung
18	chr7:25608000-25608600	Flanking Active TSS	A549	lung
19	chr7:25608000-25608800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
20	chr7:25608200-25608400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr7:25608200-25608400	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
22	chr7:25608200-25608600	Enhancers	H1 Cell Line	embryonic stem cell
23	chr7:25608200-25608600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
24	chr7:25608200-25608600	Enhancers	H9 Cell Line	embryonic stem cell
25	chr7:25608200-25608600	Enhancers	HUES48 Cell Line	embryonic stem cell
26	chr7:25608200-25608600	Enhancers	iPS-18 Cell Line	embryonic stem cell
27	chr7:25608200-25608600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr7:25608200-25608600	Flanking Active TSS	Liver	Liver
29	chr7:25608200-25608600	Enhancers	Placenta	Placenta
30	chr7:25608200-25608600	Enhancers	Rectal Mucosa Donor 29	rectum
31	chr7:25608200-25608600	Flanking Active TSS	HepG2	liver
32	chr7:25608200-25608600	Flanking Active TSS	K562	blood
33	chr7:25608200-25608800	Enhancers	Pancreas	Pancrea
34	chr7:25608200-25609000	Weak transcription	Primary T helper cells PMA-I stimulated	--
35	chr7:25608400-25608600	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr7:25608400-25608600	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
37	chr7:25608400-25609200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr7:25608400-25613400	Weak transcription	Fetal Lung	lung
39	chr7:25608600-25608800	Enhancers	Liver	Liver
40	chr7:25608600-25608800	Active TSS	A549	lung
41	chr7:25608600-25608800	Active TSS	HepG2	liver
42	chr7:25608600-25608800	Active TSS	K562	blood
43	chr7:25609400-25609600	Enhancers	Primary hematopoietic stem cells short term culture	blood
44	chr7:25609400-25609600	Enhancers	Primary T helper cells PMA-I stimulated	--
45	chr7:25613400-25613800	Enhancers	Brain Hippocampus Middle	brain
46	chr7:25613400-25614800	Enhancers	Fetal Lung	lung
47	chr7:25613600-25614400	Enhancers	Breast Myoepithelial Primary Cells	Breast
48	chr7:25614200-25614400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr7:25614200-25615000	Enhancers	Fetal Stomach	stomach
50	chr7:25614400-25614800	Enhancers	Adipose Nuclei	Adipose

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links