Variant report

Variant	esv1799682
Chromosome Location	chr10:96690805-96692810
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 91 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:91 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs79547166	chr10:96690805-96690806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs368216842	chr10:96690823-96690824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs114133473	chr10:96690835-96690836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs556901536	chr10:96690865-96690866	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs576730817	chr10:96690882-96690883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs116445518	chr10:96690907-96690908	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs145414322	chr10:96690963-96690964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs572986194	chr10:96690991-96690992	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs115735554	chr10:96691003-96691004	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs113335967	chr10:96691011-96691012	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs77315016	chr10:96691021-96691022	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
12	rs76013463	chr10:96691036-96691037	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs147702523	chr10:96691047-96691048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs1934961	chr10:96691104-96691105	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs550474554	chr10:96691109-96691110	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs560303600	chr10:96691128-96691129	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs545797172	chr10:96691157-96691158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs75016175	chr10:96691167-96691168	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs528604414	chr10:96691181-96691182	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs547978888	chr10:96691204-96691205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs112115805	chr10:96691205-96691206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs530748491	chr10:96691217-96691218	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs79777482	chr10:96691219-96691220	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs570726333	chr10:96691221-96691222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs558837059	chr10:96691222-96691223	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs563496868	chr10:96691233-96691234	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs539397337	chr10:96691244-96691245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs553042502	chr10:96691260-96691261	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs186243660	chr10:96691275-96691276	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs535570161	chr10:96691290-96691291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs555131916	chr10:96691375-96691376	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs574904343	chr10:96691420-96691421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs544019503	chr10:96691468-96691469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs557325806	chr10:96691473-96691474	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs577130131	chr10:96691481-96691482	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs545784638	chr10:96691553-96691554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs116920098	chr10:96691558-96691559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs528544397	chr10:96691564-96691565	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs189963762	chr10:96691785-96691786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs144463961	chr10:96691797-96691798	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs182491024	chr10:96691807-96691808	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs550759702	chr10:96691874-96691875	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs577511234	chr10:96691885-96691886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs11516923	chr10:96691895-96691896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs548656963	chr10:96691926-96691927	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs570644376	chr10:96691927-96691928	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs527925332	chr10:96691939-96691940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs546265509	chr10:96691940-96691941	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs187124783	chr10:96691979-96691980	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs113728445	chr10:96691992-96691993	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Usher syndrome	20538994	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Paraganglioma	17535989	CNVD
Submicroscopic aberration syndrome	21292638	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Colorectal cancer	18645599	CNVD
Polyposis syndrome	18645599	CNVD
Prostate cancer	17245344	CNVD
Glioblastoma multiforme	17369134	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	22032731	CNVD
Ovarian cancer	20844748	CNVD
Glioblastoma multiforme	17002787	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21364760	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cervical cancer	21062161	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	24453001	CNVD
Breast cancer	16608533	CNVD
Intracranial aneurysm	16715129	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Schizophrenia	23813976	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:96681400-96695600	Weak transcription	Fetal Intestine Small	intestine

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