Variant report

Variant esv1800575
Chromosome Location chr5:41271985-41288302
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:41269400-41272600 Enhancers Fetal Heart heart
2 chr5:41271000-41274600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr5:41271200-41272600 Enhancers Pancreatic Islets Pancreatic Islet
4 chr5:41272600-41277600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr5:41274600-41274800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
6 chr5:41274800-41275200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr5:41275200-41276600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr5:41275400-41276000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr5:41275600-41276800 Enhancers GM12878-XiMat blood
10 chr5:41276800-41278000 Weak transcription GM12878-XiMat blood
11 chr5:41277600-41278000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr5:41277600-41278800 Enhancers Pancreatic Islets Pancreatic Islet
13 chr5:41278000-41278600 Enhancers Brain Substantia Nigra brain
14 chr5:41278000-41278600 Enhancers GM12878-XiMat blood
15 chr5:41278600-41281200 Weak transcription GM12878-XiMat blood
16 chr5:41278800-41279200 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr5:41279200-41279400 Enhancers Pancreatic Islets Pancreatic Islet
18 chr5:41279400-41281200 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr5:41281000-41281200 Enhancers Rectal Mucosa Donor 29 rectum
20 chr5:41281200-41281400 Enhancers Pancreatic Islets Pancreatic Islet
21 chr5:41281200-41281400 Flanking Active TSS GM12878-XiMat blood
22 chr5:41281200-41281600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr5:41281200-41281600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
24 chr5:41281200-41281600 Active TSS Rectal Mucosa Donor 31 rectum
25 chr5:41281400-41281800 Active TSS Duodenum Mucosa Duodenum
26 chr5:41281400-41281800 Flanking Active TSS Pancreatic Islets Pancreatic Islet
27 chr5:41281400-41282200 Active TSS GM12878-XiMat blood
28 chr5:41281800-41282000 Flanking Active TSS Duodenum Mucosa Duodenum
29 chr5:41281800-41282000 Bivalent Enhancer Hela-S3 cervix
30 chr5:41281800-41282600 Active TSS Pancreatic Islets Pancreatic Islet
31 chr5:41282000-41285800 Weak transcription Duodenum Mucosa Duodenum
32 chr5:41282600-41283600 Enhancers Pancreatic Islets Pancreatic Islet
33 chr5:41283400-41283600 Enhancers H9 Cell Line embryonic stem cell
34 chr5:41283400-41283600 Enhancers Fetal Heart heart
35 chr5:41283400-41284000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr5:41283400-41284200 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr5:41283400-41286200 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr5:41283400-41286200 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr5:41283600-41283800 Enhancers HUES6 Cell Line embryonic stem cell
40 chr5:41283600-41285800 Enhancers HUES64 Cell Line embryonic stem cell
41 chr5:41283600-41285800 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr5:41283600-41286200 Enhancers HUES48 Cell Line embryonic stem cell
43 chr5:41283800-41285400 Weak transcription Fetal Heart heart
44 chr5:41283800-41285600 Enhancers H1 Cell Line embryonic stem cell
45 chr5:41284000-41285800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr5:41284200-41284600 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr5:41284600-41286200 Enhancers iPS-20b Cell Line embryonic stem cell
48 chr5:41285200-41286200 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr5:41285400-41286200 Enhancers H9 Cell Line embryonic stem cell
50 chr5:41285400-41286200 Enhancers HUES6 Cell Line embryonic stem cell

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