Variant report
Variant | esv1801662 |
---|---|
Chromosome Location | chr22:21502145-21610821 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2444)
- CpG islands (count:427)
- Chromatin interactive region (count:0)
- LncRNA region (count:42)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21592118-21592318 | HepG2 | liver: | n/a | n/a |
2 | ATF3 | chr22:21505263-21505378 | K562 | blood: | n/a | chr22:21505324-21505335 chr22:21505327-21505337 chr22:21505324-21505334 chr22:21505323-21505336 chr22:21505325-21505338 chr22:21505323-21505338 chr22:21505325-21505336 chr22:21505327-21505335 chr22:21505315-21505335 chr22:21505325-21505336 chr22:21505324-21505334 chr22:21505327-21505334 chr22:21505324-21505337 chr22:21505324-21505337 |
3 | BATF | chr22:21555841-21556178 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr22:21534431-21534821 | GM12878 | blood: | n/a | chr22:21534544-21534554 |
5 | BATF | chr22:21521921-21522186 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr22:21604490-21604702 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:21533096-21533364 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:21530065-21530551 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:21521889-21522186 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:21526589-21526811 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:21537247-21537499 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:21582473-21582683 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr22:21595541-21595907 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr22:21598960-21599438 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr22:21520245-21520522 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr22:21520279-21520520 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr22:21533773-21534122 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr22:21597069-21597517 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr22:21539105-21539312 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr22:21596510-21596681 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr22:21532564-21532829 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr22:21529720-21529985 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr22:21545572-21545926 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr22:21561792-21562184 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr22:21598470-21598721 | GM12878 | blood: | n/a | chr22:21598499-21598512 |
26 | BATF | chr22:21521062-21521331 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr22:21536563-21536760 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr22:21514000-21514283 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr22:21539847-21540203 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr22:21524608-21524792 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr22:21551290-21551548 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr22:21544870-21545207 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr22:21598826-21599972 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr22:21536438-21536651 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr22:21589609-21589832 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr22:21595314-21596320 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr22:21535504-21535712 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr22:21521061-21521331 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr22:21539391-21539831 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr22:21531098-21531274 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr22:21561794-21562148 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr22:21545255-21545668 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr22:21598457-21598767 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr22:21525723-21525992 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr22:21529659-21530557 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr22:21537465-21537720 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr22:21521035-21521266 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr22:21595087-21596596 | GM12878 | blood: | n/a | chr22:21595372-21595380 chr22:21595811-21595820 |
49 | BCL11A | chr22:21561919-21562177 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr22:21599067-21599394 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21538194-21538244 | AoSMC | blood vessel: | n/a |
2 | chr22:21537792-21537842 | NB4 | blood: | n/a |
3 | chr22:21505345-21505395 | AG09319 | gingival: | n/a |
4 | chr22:21539377-21539427 | NT2-D1 | testis: | n/a |
5 | chr22:21537792-21537842 | NHBE | bronchial: | n/a |
6 | chr22:21539377-21539427 | HRPEpiC | eye: | n/a |
7 | chr22:21505676-21505726 | HepG2 | liver: | n/a |
8 | chr22:21505676-21505726 | AG10803 | skin: | n/a |
9 | chr22:21537792-21537842 | BE2_C | brain: | n/a |
10 | chr22:21537792-21537842 | PFSK-1 | brain: | n/a |
11 | chr22:21541635-21541685 | GM06990 | blood: | n/a |
12 | chr22:21505676-21505726 | CMK | blood: | n/a |
13 | chr22:21537792-21537842 | AG04449 | skin: | fetal |
14 | chr22:21567227-21567277 | GM06990 | blood: | n/a |
15 | chr22:21538194-21538244 | GM12891 | blood: | n/a |
16 | chr22:21537792-21537842 | Hepatocyte | liver: | n/a |
17 | chr22:21538194-21538244 | PANC-1 | pancreas: | n/a |
18 | chr22:21505345-21505395 | HMEC | breast: | n/a |
19 | chr22:21539377-21539427 | PrEC | prostate: | n/a |
20 | chr22:21567227-21567277 | HRCEpiC | kidney: | n/a |
21 | chr22:21567227-21567277 | T-47D | breast: | n/a |
22 | chr22:21539377-21539427 | GM12891 | blood: | n/a |
23 | chr22:21505345-21505395 | GM12892 | blood: | n/a |
24 | chr22:21567227-21567277 | HMEC | breast: | n/a |
25 | chr22:21539377-21539427 | AG04449 | skin: | fetal |
26 | chr22:21537792-21537842 | HEEpiC | esophagus: | n/a |
27 | chr22:21505676-21505726 | HUVEC | blood vessel: | n/a |
28 | chr22:21538194-21538244 | LNCaP | prostate: | n/a |
29 | chr22:21537792-21537842 | PrEC | prostate: | n/a |
30 | chr22:21541635-21541685 | HRE | kidney: | n/a |
31 | chr22:21538194-21538244 | HCT-116 | colon: | n/a |
32 | chr22:21541635-21541685 | BJ | skin: | n/a |
33 | chr22:21538194-21538244 | ovcar-3 | ovarian: | n/a |
34 | chr22:21567227-21567277 | NB4 | blood: | n/a |
35 | chr22:21505676-21505726 | HEEpiC | esophagus: | n/a |
36 | chr22:21541635-21541685 | T-47D | breast: | n/a |
37 | chr22:21567227-21567277 | HIPEpiC | eye: | n/a |
38 | chr22:21505676-21505726 | HRPEpiC | eye: | n/a |
39 | chr22:21538194-21538244 | HMEC | breast: | n/a |
40 | chr22:21539377-21539427 | GM19239 | blood: | n/a |
41 | chr22:21539377-21539427 | GM06990 | blood: | n/a |
42 | chr22:21541635-21541685 | Caco-2 | colon: | n/a |
43 | chr22:21538194-21538244 | HCPEpiC | choroid plexus: | n/a |
44 | chr22:21567227-21567277 | GM19239 | blood: | n/a |
45 | chr22:21538194-21538244 | MCF-7 | breast: | n/a |
46 | chr22:21539377-21539427 | HNPCEpiC | eye: | n/a |
47 | chr22:21538194-21538244 | RPTEC | kidney: | n/a |
48 | chr22:21505345-21505395 | HCF | heart: | n/a |
49 | chr22:21567227-21567277 | SAEC | small airway: | n/a |
50 | chr22:21541635-21541685 | CMK | blood: | n/a |
No data |
(count:42 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-AP000552.1-2 | chr22:21524762-21524894 | ENSG00000215498.4 |
2 | lnc-AP000552.1-2 | chr22:21534785-21534846 | ENSG00000215498.4 |
3 | lnc-AP000552.1-2 | chr22:21535312-21535345 | ENSG00000215498.4 |
4 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
5 | lnc-AP000552.1-2 | chr22:21524762-21525141 | ENSG00000215498.4 |
6 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
7 | lnc-AP000552.1-2 | chr22:21534785-21534846 | ENSG00000215498.4 |
8 | lnc-AP000552.1-2 | chr22:21522142-21522258 | ENSG00000215498.4 |
9 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
10 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
11 | lnc-AP000552.1-2 | chr22:21546011-21546438 | ENSG00000215498.4 |
12 | lnc-AP000552.1-2 | chr22:21535312-21535345 | ENSG00000215498.4 |
13 | lnc-AP000552.1-2 | chr22:21535312-21535345 | ENSG00000215498.4 |
14 | lnc-AP000552.1-2 | chr22:21524762-21524786 | ENSG00000215498.4 |
15 | lnc-AP000552.1-2 | chr22:21524762-21524786 | ENSG00000215498.4 |
16 | lnc-AP000552.1-2 | chr22:21532720-21532785 | ENSG00000215498.4 |
17 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
18 | lnc-GGT2-1 | chr22:21532181-21532838 | ENSG00000234503 |
19 | lnc-AP000552.1-2 | chr22:21532720-21532785 | ENSG00000215498.4 |
20 | lnc-AP000552.1-2 | chr22:21524762-21524786 | ENSG00000215498.4 |
21 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
22 | lnc-AP000552.1-2 | chr22:21522174-21522258 | ENSG00000215498.4 |
23 | lnc-GGT2-1 | chr22:21534049-21534164 | ENSG00000234503 |
24 | lnc-AP000552.1-2 | chr22:21534785-21534846 | ENSG00000215498.4 |
25 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
26 | lnc-AP000552.1-2 | chr22:21535312-21535345 | ENSG00000215498.4 |
27 | lnc-AP000552.1-2 | chr22:21535741-21537263 | ENSG00000215498.4 |
28 | lnc-AP000552.1-2 | chr22:21525370-21525497 | ENSG00000215498.4 |
29 | lnc-AP000552.1-2 | chr22:21522142-21522258 | ENSG00000215498.4 |
30 | lnc-AP000552.1-2 | chr22:21532720-21532785 | ENSG00000215498.4 |
31 | lnc-AP000552.1-2 | chr22:21524762-21524944 | ENSG00000215498.4 |
32 | lnc-AP000552.1-2 | chr22:21522118-21522258 | ENSG00000215498.4 |
33 | lnc-AP000552.1-2 | chr22:21534785-21534846 | ENSG00000215498.4 |
34 | lnc-AP000552.1-2 | chr22:21532720-21532785 | ENSG00000215498.4 |
35 | lnc-AP000552.1-2 | chr22:21524102-21524293 | ENSG00000215498.4 |
36 | lnc-AP000552.1-2 | chr22:21524154-21524293 | ENSG00000215498.4 |
37 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
38 | lnc-AP000552.1-2 | chr22:21540410-21541366 | ENSG00000215498.4 |
39 | lnc-AP000552.1-2 | chr22:21537560-21537611 | ENSG00000215498.4 |
40 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
41 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
42 | lnc-AP000552.1-2 | chr22:21524762-21524786 | ENSG00000215498.4 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000234503 | TF binding region |
FAM230B | TF binding region |
GGT2 | TF binding region |
ENSG00000234503 | CpG island |
FAM230B | CpG island |
GGT2 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs531562872 | chr22:21503400-21503401 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs137978508 | chr22:21503510-21503511 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs548174724 | chr22:21503517-21503518 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs75911663 | chr22:21503689-21503690 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs367909746 | chr22:21503763-21503764 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs200619406 | chr22:21517254-21517255 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs371660252 | chr22:21517333-21517334 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs375471867 | chr22:21517372-21517373 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs62239809 | chr22:21517397-21517398 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs9620882 | chr22:21517412-21517413 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs372009033 | chr22:21517452-21517453 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs376691057 | chr22:21517482-21517483 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs2080588 | chr22:21517507-21517508 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs62239812 | chr22:21517515-21517516 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs550431168 | chr22:21517609-21517610 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs62239813 | chr22:21517640-21517641 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs368706625 | chr22:21517642-21517643 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs371835796 | chr22:21517652-21517653 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs5762645 | chr22:21517672-21517673 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs199541576 | chr22:21517679-21517680 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs201626435 | chr22:21517693-21517694 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs2262467 | chr22:21517725-21517726 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs78387953 | chr22:21517794-21517795 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs201310350 | chr22:21517842-21517843 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs201473050 | chr22:21517843-21517844 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs4051870 | chr22:21517857-21517858 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs201757405 | chr22:21518252-21518253 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs576039194 | chr22:21519805-21519806 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs111220804 | chr22:21519806-21519807 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs192448686 | chr22:21519819-21519820 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs550077110 | chr22:21519821-21519822 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs373491714 | chr22:21519824-21519825 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs563908491 | chr22:21519826-21519827 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs185353282 | chr22:21519848-21519849 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs188610677 | chr22:21519852-21519853 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs192725861 | chr22:21519864-21519865 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs529570708 | chr22:21519874-21519875 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs549737381 | chr22:21519876-21519877 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs58655657 | chr22:21519879-21519880 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs188232722 | chr22:21519900-21519901 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs180974218 | chr22:21519935-21519936 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs528127578 | chr22:21519937-21519938 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs183564234 | chr22:21519948-21519949 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs372663571 | chr22:21519955-21519956 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs189517531 | chr22:21519972-21519973 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs182372757 | chr22:21519979-21519980 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs181354923 | chr22:21520057-21520058 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs186373571 | chr22:21520063-21520064 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs190178547 | chr22:21520064-21520065 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs182395459 | chr22:21520068-21520069 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Schizophrenia | 20967226 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Breast cancer | 22522925 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21503200-21503800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
2 | chr22:21520400-21520600 | Enhancers | Gastric | stomach |
3 | chr22:21520600-21520800 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
4 | chr22:21520600-21520800 | Flanking Active TSS | Gastric | stomach |
5 | chr22:21520600-21521000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
6 | chr22:21520600-21521000 | ZNF genes & repeats | Pancreas | Pancrea |
7 | chr22:21520800-21521000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
8 | chr22:21520800-21521000 | ZNF genes & repeats | Esophagus | oesophagus |
9 | chr22:21520800-21521000 | Flanking Bivalent TSS/Enh | Gastric | stomach |
10 | chr22:21548800-21549200 | Enhancers | HepG2 | liver |
11 | chr22:21557200-21557400 | Enhancers | Fetal Muscle Trunk | muscle |
12 | chr22:21557400-21558400 | Weak transcription | Fetal Muscle Trunk | muscle |
13 | chr22:21558400-21558600 | Enhancers | Fetal Muscle Trunk | muscle |
14 | chr22:21558600-21559000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
15 | chr22:21558600-21559000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
16 | chr22:21558600-21559000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
17 | chr22:21558600-21559000 | Enhancers | Fetal Muscle Leg | muscle |
18 | chr22:21559000-21560200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
19 | chr22:21559000-21560200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
20 | chr22:21560200-21560400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
21 | chr22:21560400-21560600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
22 | chr22:21566000-21569400 | Weak transcription | Right Atrium | heart |
23 | chr22:21569800-21590800 | Weak transcription | Gastric | stomach |
24 | chr22:21570200-21570800 | Enhancers | HMEC | breast |
25 | chr22:21570400-21570600 | Bivalent Enhancer | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
26 | chr22:21570400-21570800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
27 | chr22:21570400-21570800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
28 | chr22:21576000-21576200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
29 | chr22:21576000-21576200 | Enhancers | Spleen | Spleen |
30 | chr22:21590600-21590800 | Enhancers | Stomach Mucosa | stomach |
31 | chr22:21590600-21591200 | Enhancers | Pancreas | Pancrea |
32 | chr22:21590800-21591000 | Enhancers | Gastric | stomach |
33 | chr22:21590800-21591800 | Weak transcription | Stomach Mucosa | stomach |
34 | chr22:21591000-21591800 | Weak transcription | Gastric | stomach |
35 | chr22:21591200-21591600 | Weak transcription | Pancreas | Pancrea |
36 | chr22:21591600-21592800 | Enhancers | Pancreas | Pancrea |
37 | chr22:21591800-21592000 | Enhancers | Duodenum Mucosa | Duodenum |
38 | chr22:21591800-21592200 | Enhancers | Fetal Intestine Large | intestine |
39 | chr22:21591800-21592200 | Enhancers | Fetal Intestine Small | intestine |
40 | chr22:21591800-21592200 | Enhancers | Gastric | stomach |
41 | chr22:21591800-21592200 | Enhancers | Stomach Mucosa | stomach |
42 | chr22:21591800-21592400 | Enhancers | HepG2 | liver |
43 | chr22:21592000-21592200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
44 | chr22:21592000-21592200 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
45 | chr22:21592200-21592400 | Enhancers | Duodenum Mucosa | Duodenum |
46 | chr22:21592400-21592800 | Active TSS | Duodenum Mucosa | Duodenum |
47 | chr22:21598600-21599000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
48 | chr22:21604600-21605000 | Bivalent Enhancer | HepG2 | liver |
49 | chr22:21607400-21608600 | Enhancers | HepG2 | liver |
50 | chr22:21607800-21608200 | Enhancers | Fetal Intestine Small | intestine |