Variant report

Variant	esv1801776
Chromosome Location	chr12:49915354-49934565
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:265)
CpG islands
(count:855)
Chromatin interactive
region (count:28)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:265 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr12:49923328-49923532	K562	blood:	n/a	n/a
2	BACH1	chr12:49931662-49931790	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCL3	chr12:49930560-49930919	GM12878	blood:	n/a	n/a
4	BCL3	chr12:49931825-49932343	A549	lung:	n/a	chr12:49931882-49931895 chr12:49932310-49932319 chr12:49931878-49931891
5	BCL3	chr12:49929959-49930186	GM12878	blood:	n/a	n/a
6	BHLHE40	chr12:49932744-49932828	K562	blood:	n/a	n/a
7	BHLHE40	chr12:49931999-49932001	K562	blood:	n/a	n/a
8	CCNT2	chr12:49932823-49933078	K562	blood:	n/a	n/a
9	CHD2	chr12:49928690-49928743	H1-hESC	embryonic stem cell:	n/a	n/a
10	CREB1	chr12:49931581-49931900	A549	lung:	n/a	n/a
11	CTBP2	chr12:49931693-49932263	H1-hESC	embryonic stem cell:	n/a	n/a
12	CTCF	chr12:49931940-49932090	HMF	breast:	n/a	n/a
13	CTCF	chr12:49931840-49931990	GM12864	blood:	n/a	n/a
14	CTCF	chr12:49931956-49932074	Spleen_OC	spleen:	n/a	n/a
15	CTCF	chr12:49931280-49931430	HBMEC	blood vessel:	n/a	n/a
16	CTCF	chr12:49931928-49932122	GM12878	blood:	n/a	n/a
17	CTCF	chr12:49931927-49932175	GM12892	blood:	n/a	n/a
18	CTCF	chr12:49921981-49922010	LNCaP	prostate:	n/a	n/a
19	CTCF	chr12:49931920-49932070	HFF-Myc	foreskin:	n/a	n/a
20	CTCF	chr12:49931940-49932090	MCF-7	breast:	n/a	n/a
21	CTCF	chr12:49931946-49932034	GM13977	blood:	n/a	n/a
22	CTCF	chr12:49931942-49932107	H1-hESC	embryonic stem cell:	n/a	n/a
23	CTCF	chr12:49931942-49932190	GM12891	blood:	n/a	n/a
24	CTCF	chr12:49932140-49932290	AG04449	skin:	n/a	chr12:49932205-49932218
25	CTCF	chr12:49934421-49934448	NHEK	skin:	n/a	n/a
26	CTCF	chr12:49931980-49932130	GM06990	blood:	n/a	n/a
27	CTCF	chr12:49931880-49932030	AG04449	skin:	n/a	n/a
28	CTCF	chr12:49931940-49932090	K562	blood:	n/a	n/a
29	CTCF	chr12:49931940-49932090	WERI-Rb-1	eye:	n/a	n/a
30	CTCF	chr12:49918900-49919050	HPAF	blood vessel:	n/a	n/a
31	CTCF	chr12:49931940-49932090	GM06990	blood:	n/a	n/a
32	CTCF	chr12:49931780-49932070	GM12872	blood:	n/a	n/a
33	CTCF	chr12:49931860-49932010	RPTEC	kidney:	n/a	n/a
34	CTCF	chr12:49931940-49932090	Caco-2	colon:	n/a	n/a
35	CTCF	chr12:49931960-49932110	GM12878	blood:	n/a	n/a
36	CTCF	chr12:49931920-49932070	BJ	skin:	n/a	n/a
37	CTCF	chr12:49931900-49932050	HEK293	kidney:	n/a	n/a
38	CTCF	chr12:49931920-49932070	HCPEpiC	choroid plexus:	n/a	n/a
39	CTCF	chr12:49931892-49932086	K562	blood:	n/a	n/a
40	CTCF	chr12:49932000-49932150	HRE	kidney:	n/a	n/a
41	CTCF	chr12:49931960-49932110	GM12875	blood:	n/a	n/a
42	CTCF	chr12:49931910-49932030	GM20000	blood:	n/a	n/a
43	CTCF	chr12:49931920-49932070	GM12869	blood:	n/a	n/a
44	CTCF	chr12:49932740-49933070	K562	blood:	n/a	n/a
45	CTCF	chr12:49932740-49932890	GM12868	blood:	n/a	n/a
46	CTCF	chr12:49931962-49932119	GM12878	blood:	n/a	n/a
47	CTCF	chr12:49931971-49932081	GM10266	blood:	n/a	n/a
48	CTCF	chr12:49931840-49931990	GM12875	blood:	n/a	n/a
49	CTCF	chr12:49931800-49931950	A549	lung:	n/a	n/a
50	CTCF	chr12:49931900-49932050	GM12873	blood:	n/a	n/a

(count:855 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:49934029-49934079	PrEC	prostate:	n/a
2	chr12:49934029-49934079	PrEC	prostate:	n/a
3	chr12:49920480-49920530	SAEC	small airway:	n/a
4	chr12:49931989-49932039	AoSMC	blood vessel:	n/a
5	chr12:49933636-49933686	ProgFib	skin:	n/a
6	chr12:49932779-49932829	GM12892	blood:	n/a
7	chr12:49932972-49933022	HCF	heart:	n/a
8	chr12:49928924-49928974	HEK293	kidney:	embryo
9	chr12:49932216-49932266	MCF10A-Er-Src	breast:	n/a
10	chr12:49931501-49931551	NH-A	brain:	n/a
11	chr12:49933539-49933589	Hepatocyte	liver:	n/a
12	chr12:49932972-49933022	MCF10A-Er-Src	breast:	n/a
13	chr12:49932972-49933022	HCM	heart:	n/a
14	chr12:49932216-49932266	A549	lung:	n/a
15	chr12:49931501-49931551	HEK293	kidney:	embryo
16	chr12:49931501-49931551	Hela-S3	cervix:	n/a
17	chr12:49920480-49920530	RPTEC	kidney:	n/a
18	chr12:49931989-49932039	A549	lung:	n/a
19	chr12:49932216-49932266	Hela-S3	cervix:	n/a
20	chr12:49931989-49932039	CMK	blood:	n/a
21	chr12:49932857-49932907	RPTEC	kidney:	n/a
22	chr12:49932289-49932339	HRE	kidney:	n/a
23	chr12:49931501-49931551	HepG2	liver:	n/a
24	chr12:49920480-49920530	U87	brain:	n/a
25	chr12:49932289-49932339	SAEC	small airway:	n/a
26	chr12:49920480-49920530	CMK	blood:	n/a
27	chr12:49932972-49933022	K562	blood:	n/a
28	chr12:49932779-49932829	IMR90	lung:	fetal
29	chr12:49932972-49933022	AG09319	gingival:	n/a
30	chr12:49933636-49933686	IMR90	lung:	fetal
31	chr12:49933539-49933589	HIPEpiC	eye:	n/a
32	chr12:49932972-49933022	NT2-D1	testis:	n/a
33	chr12:49932216-49932266	HCT-116	colon:	n/a
34	chr12:49932972-49933022	GM19239	blood:	n/a
35	chr12:49932779-49932829	PrEC	prostate:	n/a
36	chr12:49931989-49932039	HEK293	kidney:	embryo
37	chr12:49920480-49920530	GM19239	blood:	n/a
38	chr12:49932779-49932829	Hela-S3	cervix:	n/a
39	chr12:49932857-49932907	HCT-116	colon:	n/a
40	chr12:49933636-49933686	U87	brain:	n/a
41	chr12:49932857-49932907	AG10803	skin:	n/a
42	chr12:49933636-49933686	MCF10A-Er-Src	breast:	n/a
43	chr12:49931989-49932039	U87	brain:	n/a
44	chr12:49934029-49934079	HEEpiC	esophagus:	n/a
45	chr12:49932857-49932907	HMEC	breast:	n/a
46	chr12:49932860-49932910	BJ	skin:	n/a
47	chr12:49934029-49934079	HL-60	blood:	n/a
48	chr12:49933636-49933686	BJ	skin:	n/a
49	chr12:49931989-49932039	HPAEpiC	pulmonary alveolar:	n/a
50	chr12:49932795-49932845	NT2-D1	testis:	n/a

(count:28 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:49657699..49660591-chr12:49932809..49935394,2	MCF-7	breast:
2	chr12:49925851..49930721-chr12:49933231..49936704,4	MCF-7	breast:
3	chr12:49920492..49922115-chr12:49926233..49928971,2	MCF-7	breast:
4	chr12:49912988..49915445-chr12:49916293..49919057,4	K562	blood:
5	chr12:49924771..49927060-chr12:49927264..49929041,2	K562	blood:
6	chr12:49744876..49747449-chr12:49923106..49924717,2	MCF-7	breast:
7	chr12:49918254..49920167-chr12:49933087..49935640,2	MCF-7	breast:
8	chr12:49759326..49761606-chr12:49928836..49931818,3	MCF-7	breast:
9	chr12:49930852..49937653-chr12:49953841..49959391,7	K562	blood:
10	chr12:49920492..49922115-chr12:49926233..49928971,2	MCF-7	breast:
11	chr12:49923572..49927432-chr12:49929998..49933415,4	K562	blood:
12	chr12:49921630..49924042-chr12:49926070..49928576,2	K562	blood:
13	chr12:49915417..49918018-chr12:49960149..49961960,3	MCF-7	breast:
14	chr12:49759353..49761548-chr12:49931777..49934189,4	K562	blood:
15	chr12:49921712..49923511-chr12:49960745..49963724,3	MCF-7	breast:
16	chr12:49743272..49745246-chr12:49919993..49922237,2	MCF-7	breast:
17	chr12:49759022..49764027-chr12:49928293..49932911,8	MCF-7	breast:
18	chr12:49668500..49671128-chr12:49928861..49931681,2	MCF-7	breast:
19	chr12:49930865..49935032-chr12:49959689..49963246,5	K562	blood:
20	chr12:49909845..49911821-chr12:49917345..49920112,2	K562	blood:
21	chr12:49657840..49660330-chr12:49922519..49924856,2	K562	blood:
22	chr12:49931420..49936579-chr12:49960006..49963071,6	MCF-7	breast:
23	chr12:49921630..49924042-chr12:49926070..49928576,2	K562	blood:
24	chr12:49759353..49762276-chr12:49930939..49933731,4	K562	blood:
25	chr12:49927196..49929011-chr12:49930534..49932956,2	MCF-7	breast:
26	chr12:49933783..49936509-chr12:49951821..49953726,3	K562	blood:
27	chr12:49924771..49927060-chr12:49927264..49929041,2	K562	blood:
28	chr12:49657477..49660356-chr12:49930384..49933439,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KCNH3-2	chr12:49931398-49931555	NONHSAT028109
2	lnc-KCNH3-2	chr12:49931669-49931973	NONHSAT028109
3	lnc-KCNH3-2	chr12:49932202-49932791	NONHSAT028109

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	SPATS2	hsa-miR-296-3p	chr12:49921066-49921087
2	SPATS2	hsa-miR-103a-3p	chr12:49921141-49921163

Variant related genes	Relation type
KCNH3	TF binding region
SPATS2	TF binding region
KCNH3	CpG island
SPATS2	CpG island
ENSG00000110844	chromatin interactions
ENSG00000167553	chromatin interactions
ENSG00000187778	chromatin interactions
ENSG00000178401	chromatin interactions
ENSG00000135519	chromatin interactions
ENSG00000123352	chromatin interactions
ENSG00000258101	chromatin interactions

Extended variants
information (count: 684 )
Associated
traits (count: 73 )

Variant overlapped rSNPs/rCNVs (count:684 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs142075397	chr12:49915360-49915361	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs151141750	chr12:49915420-49915421	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs140413576	chr12:49915487-49915488	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs184630767	chr12:49915534-49915535	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs576354723	chr12:49915547-49915548	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs373049613	chr12:49915584-49915585	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs542138218	chr12:49915585-49915586	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs555410930	chr12:49915588-49915589	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs574753124	chr12:49915678-49915679	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs540235078	chr12:49915731-49915732	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs571780471	chr12:49915811-49915812	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs111233399	chr12:49915812-49915813	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs74541011	chr12:49915825-49915826	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs78710864	chr12:49915830-49915831	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs568981761	chr12:49915848-49915849	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs531079357	chr12:49915879-49915880	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs577224576	chr12:49915909-49915910	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs545895565	chr12:49915911-49915912	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs562739677	chr12:49915913-49915914	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs531825868	chr12:49915920-49915921	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs34923700	chr12:49915936-49915937	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs78471387	chr12:49915940-49915941	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs571124798	chr12:49915955-49915956	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs112651619	chr12:49916011-49916012	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs368075863	chr12:49916012-49916013	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs200979319	chr12:49916014-49916015	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs377614853	chr12:49916015-49916016	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs112774624	chr12:49916016-49916017	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs76577623	chr12:49916033-49916034	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs528004695	chr12:49916082-49916083	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs180932133	chr12:49916096-49916097	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs60845885	chr12:49916097-49916098	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs570431557	chr12:49916109-49916110	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs568490439	chr12:49916161-49916162	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs185924398	chr12:49916205-49916206	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs144153633	chr12:49916254-49916255	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs549945398	chr12:49916313-49916314	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs376177358	chr12:49916347-49916348	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs74089551	chr12:49916373-49916374	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs146502336	chr12:49916392-49916393	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs539062027	chr12:49916393-49916394	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs12309053	chr12:49916459-49916460	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs572209622	chr12:49916487-49916488	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs534924563	chr12:49916509-49916510	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs532487913	chr12:49916559-49916560	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs374267477	chr12:49916604-49916605	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs113331704	chr12:49916642-49916643	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs553834337	chr12:49916664-49916665	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs201627369	chr12:49916665-49916666	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs368469004	chr12:49916666-49916667	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:73)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Neurodevelopmental disorder	22521361	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
Follicular lymphoma	20505157	CNVD
Hepatocellular carcinoma	16750200	CNVD
Melanoma	18172304	CNVD
Metanephric adenoma	20802469	CNVD
Glioblastoma multiforme	17387387	CNVD
liposarcomas	17372913	CNVD
Non-small cell lung cancer	24170126	CNVD
Cancer	16751803	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	16616336	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	17661082	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21785460	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Intracranial ependymoma	16609018	CNVD
Cancer	17160897	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Ovarian cancer	21781307	CNVD
Melanoma	20877625	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1090 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:49823000-49915800	Weak transcription	Primary B cells from cord blood	blood
2	chr12:49869600-49918400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr12:49873000-49918800	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr12:49873200-49918600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr12:49876800-49916200	Weak transcription	Psoas Muscle	Psoas
6	chr12:49878600-49918600	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr12:49880400-49916000	Weak transcription	Stomach Smooth Muscle	stomach
8	chr12:49882200-49918800	Weak transcription	Colonic Mucosa	Colon
9	chr12:49882400-49918400	Weak transcription	Lung	lung
10	chr12:49882600-49916400	Weak transcription	Aorta	Aorta
11	chr12:49884200-49918400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr12:49884200-49918600	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr12:49884600-49916400	Weak transcription	Primary hematopoietic stem cells	blood
14	chr12:49886000-49918400	Weak transcription	Rectal Smooth Muscle	rectum
15	chr12:49886400-49918200	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr12:49888800-49927800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr12:49890800-49918600	Weak transcription	Brain Anterior Caudate	brain
18	chr12:49890800-49918600	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr12:49891000-49916600	Weak transcription	Ovary	ovary
20	chr12:49894000-49916600	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr12:49894000-49919600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr12:49894400-49915400	Weak transcription	Primary B cells from peripheral blood	blood
23	chr12:49896000-49916800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr12:49896400-49916600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr12:49896800-49916400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr12:49896800-49916400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr12:49896800-49916600	Weak transcription	Fetal Thymus	thymus
28	chr12:49898200-49916400	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr12:49898200-49918400	Weak transcription	Rectal Mucosa Donor 31	rectum
30	chr12:49900000-49916400	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr12:49900600-49916400	Weak transcription	HUES6 Cell Line	embryonic stem cell
32	chr12:49900600-49916600	Weak transcription	Left Ventricle	heart
33	chr12:49905000-49918600	Weak transcription	Colon Smooth Muscle	Colon
34	chr12:49905200-49915800	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr12:49905200-49927000	Weak transcription	Fetal Heart	heart
36	chr12:49905400-49918400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr12:49905600-49919000	Weak transcription	HepG2	liver
38	chr12:49907200-49918400	Weak transcription	Brain Hippocampus Middle	brain
39	chr12:49909600-49916400	Weak transcription	Skeletal Muscle Female	skeletal muscle
40	chr12:49909600-49918800	Weak transcription	HMEC	breast
41	chr12:49909600-49925600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
42	chr12:49909800-49915400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr12:49909800-49918600	Weak transcription	Liver	Liver
44	chr12:49910600-49921600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr12:49911000-49923000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr12:49911200-49922000	Strong transcription	Fetal Intestine Large	intestine
47	chr12:49911400-49916400	Weak transcription	Fetal Lung	lung
48	chr12:49911400-49917200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
49	chr12:49911400-49918400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
50	chr12:49911600-49916000	Weak transcription	Primary T cells from cord blood	blood

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