Variant report

Variant	esv1802449
Chromosome Location	chr7:97900191-97929668
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2013)
CpG islands
(count:1708)
Chromatin interactive
region (count:61)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2013 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:97905527-97905931	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:97910130-97910572	HepG2	liver:	n/a	n/a
3	ATF2	chr7:97924076-97924542	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF3	chr7:97910813-97911050	H1-hESC	embryonic stem cell:	n/a	chr7:97910851-97910860
5	ATF3	chr7:97910828-97910981	GM12878	blood:	n/a	chr7:97910851-97910860
6	ATF3	chr7:97910761-97911014	K562	blood:	n/a	chr7:97910803-97910812 chr7:97910851-97910860
7	ATF3	chr7:97910805-97911053	GM12878	blood:	n/a	chr7:97910851-97910860
8	ATF3	chr7:97910823-97911057	HepG2	liver:	n/a	chr7:97910851-97910860
9	BACH1	chr7:97917876-97917996	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr7:97924220-97924420	K562	blood:	n/a	n/a
11	BACH1	chr7:97910074-97910547	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr7:97921177-97921322	H1-hESC	embryonic stem cell:	n/a	n/a
13	BCL3	chr7:97915326-97918372	A549	lung:	n/a	chr7:97917632-97917640 chr7:97915920-97915929 chr7:97915734-97915743 chr7:97915582-97915591
14	BCL3	chr7:97918674-97919601	A549	lung:	n/a	n/a
15	BCL3	chr7:97924031-97924646	A549	lung:	n/a	n/a
16	BCL3	chr7:97915041-97918202	A549	lung:	n/a	chr7:97917632-97917640 chr7:97915251-97915264 chr7:97915920-97915929 chr7:97915734-97915743 chr7:97915582-97915591
17	BCL3	chr7:97919923-97920450	A549	lung:	n/a	n/a
18	BCL3	chr7:97913761-97914311	A549	lung:	n/a	chr7:97913839-97913852
19	BCL3	chr7:97921164-97921643	A549	lung:	n/a	n/a
20	BCL3	chr7:97918561-97919106	A549	lung:	n/a	n/a
21	BCL3	chr7:97923287-97924722	A549	lung:	n/a	n/a
22	BCL3	chr7:97916850-97917360	GM12878	blood:	n/a	n/a
23	BCLAF1	chr7:97924131-97924466	GM12878	blood:	n/a	n/a
24	BHLHE40	chr7:97915407-97915909	K562	blood:	n/a	n/a
25	BHLHE40	chr7:97924253-97924453	A549	lung:	n/a	n/a
26	BHLHE40	chr7:97911312-97911512	GM12878	blood:	n/a	chr7:97911380-97911396
27	BHLHE40	chr7:97910772-97911094	K562	blood:	n/a	chr7:97910794-97910810 chr7:97910791-97910807 chr7:97910825-97910841
28	BHLHE40	chr7:97910158-97910542	K562	blood:	n/a	chr7:97910241-97910257 chr7:97910487-97910503
29	BHLHE40	chr7:97926630-97926703	A549	lung:	n/a	n/a
30	BHLHE40	chr7:97913699-97914165	HepG2	liver:	n/a	n/a
31	BHLHE40	chr7:97924183-97924530	K562	blood:	n/a	chr7:97924184-97924200
32	BHLHE40	chr7:97910147-97911105	HepG2	liver:	n/a	chr7:97910794-97910810 chr7:97910241-97910257 chr7:97910487-97910503 chr7:97910791-97910807 chr7:97910825-97910841
33	BHLHE40	chr7:97903341-97903345	K562	blood:	n/a	n/a
34	BHLHE40	chr7:97911359-97911360	K562	blood:	n/a	n/a
35	BHLHE40	chr7:97910134-97911092	GM12878	blood:	n/a	chr7:97910794-97910810 chr7:97910241-97910257 chr7:97910487-97910503 chr7:97910791-97910807 chr7:97910825-97910841
36	BHLHE40	chr7:97905843-97905854	K562	blood:	n/a	n/a
37	BRCA1	chr7:97915399-97915805	Hela-S3	cervix:	n/a	n/a
38	BRCA1	chr7:97924254-97924394	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr7:97910275-97910414	H1-hESC	embryonic stem cell:	n/a	n/a
40	BRCA1	chr7:97915531-97915537	HepG2	liver:	n/a	n/a
41	BRCA1	chr7:97912561-97912921	Hela-S3	cervix:	n/a	n/a
42	BRCA1	chr7:97924223-97924452	H1-hESC	embryonic stem cell:	n/a	n/a
43	BRCA1	chr7:97913816-97914213	Hela-S3	cervix:	n/a	n/a
44	CBX3	chr7:97915525-97915864	K562	blood:	n/a	n/a
45	CCNT2	chr7:97910215-97911118	K562	blood:	n/a	chr7:97910598-97910607
46	CCNT2	chr7:97913531-97913821	K562	blood:	n/a	n/a
47	CCNT2	chr7:97924197-97924600	K562	blood:	n/a	n/a
48	CCNT2	chr7:97915509-97915709	K562	blood:	n/a	n/a
49	CEBPB	chr7:97915679-97915844	HepG2	liver:	n/a	chr7:97915763-97915774
50	CEBPB	chr7:97915571-97915958	H1-hESC	embryonic stem cell:	n/a	chr7:97915763-97915774

(count:1708 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:97910856-97910906	LNCaP	prostate:	n/a
2	chr7:97910728-97910778	BJ	skin:	n/a
3	chr7:97911938-97911988	SK-N-MC	brain:	n/a
4	chr7:97920730-97920780	PANC-1	pancreas:	n/a
5	chr7:97914016-97914066	HIPEpiC	eye:	n/a
6	chr7:97910878-97910928	T-47D	breast:	n/a
7	chr7:97910571-97910621	A549	lung:	n/a
8	chr7:97910878-97910928	PFSK-1	brain:	n/a
9	chr7:97908229-97908279	GM06990	blood:	n/a
10	chr7:97914016-97914066	HRE	kidney:	n/a
11	chr7:97922907-97922957	MCF-7	breast:	n/a
12	chr7:97922759-97922809	BE2_C	brain:	n/a
13	chr7:97910808-97910858	GM12891	blood:	n/a
14	chr7:97910728-97910778	Hepatocyte	liver:	n/a
15	chr7:97922759-97922809	HEEpiC	esophagus:	n/a
16	chr7:97923751-97923801	PANC-1	pancreas:	n/a
17	chr7:97910870-97910920	NHBE	bronchial:	n/a
18	chr7:97922154-97922204	NHBE	bronchial:	n/a
19	chr7:97912641-97912691	HRCEpiC	kidney:	n/a
20	chr7:97916903-97916953	HCT-116	colon:	n/a
21	chr7:97912641-97912691	CMK	blood:	n/a
22	chr7:97923044-97923094	SK-N-SH	brain:	n/a
23	chr7:97912149-97912199	AG04450	lung:	fetal
24	chr7:97920730-97920780	U87	brain:	n/a
25	chr7:97910870-97910920	SAEC	small airway:	n/a
26	chr7:97923044-97923094	HEK293	kidney:	embryo
27	chr7:97910878-97910928	HUVEC	blood vessel:	n/a
28	chr7:97923799-97923849	GM06990	blood:	n/a
29	chr7:97910808-97910858	AG04449	skin:	fetal
30	chr7:97922154-97922204	NB4	blood:	n/a
31	chr7:97910878-97910928	ovcar-3	ovarian:	n/a
32	chr7:97923834-97923884	Hela-S3	cervix:	n/a
33	chr7:97911938-97911988	SKMC	muscle:	n/a
34	chr7:97923799-97923849	CMK	blood:	n/a
35	chr7:97916903-97916953	HRE	kidney:	n/a
36	chr7:97908505-97908555	ProgFib	skin:	n/a
37	chr7:97923044-97923094	SKMC	muscle:	n/a
38	chr7:97922154-97922204	MCF10A-Er-Src	breast:	n/a
39	chr7:97910870-97910920	ProgFib	skin:	n/a
40	chr7:97923834-97923884	HRCEpiC	kidney:	n/a
41	chr7:97922907-97922957	HRE	kidney:	n/a
42	chr7:97910728-97910778	AG04449	skin:	fetal
43	chr7:97908229-97908279	Hepatocyte	liver:	n/a
44	chr7:97922154-97922204	HCF	heart:	n/a
45	chr7:97914016-97914066	Hela-S3	cervix:	n/a
46	chr7:97922208-97922258	ECC-1	luminal epithelium:	n/a
47	chr7:97908505-97908555	RPTEC	kidney:	n/a
48	chr7:97910884-97910934	AG09319	gingival:	n/a
49	chr7:97922154-97922204	AG04450	lung:	fetal
50	chr7:97923834-97923884	U87	brain:	n/a

(count:61 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:97924151..97925228-chr7:98050010..98050830,5	MCF-7	breast:
2	chr7:97834447..97836459-chr7:97921103..97922884,2	K562	blood:
3	chr7:97900433..97904239-chr7:97908509..97910838,3	K562	blood:
4	chr7:97922244..97926850-chr7:97930553..97934195,4	MCF-7	breast:
5	chr7:97922258..97924610-chr7:97924998..97927065,2	K562	blood:
6	chr7:97913545..97915721-chr7:97921794..97924476,3	MCF-7	breast:
7	chr7:97924237..97924776-chr7:98375111..98375717,3	K562	blood:
8	chr7:97922907..97924787-chr7:97933166..97935079,2	K562	blood:
9	chr11:61582797..61583762-chr7:97916855..97917508,2	Hela-S3	cervix:
10	chr1:145381867..145384622-chr7:97920706..97923671,2	MCF-7	breast:
11	chr7:97917308..97920169-chr7:97921716..97924764,3	MCF-7	breast:
12	chr7:97915929..97917893-chr7:97922819..97924333,2	MCF-7	breast:
13	chr7:97917308..97920169-chr7:97921716..97924764,3	MCF-7	breast:
14	chr7:97923862..97924526-chr7:98434595..98435120,2	K562	blood:
15	chr7:97895252..97897059-chr7:97901681..97903186,2	MCF-7	breast:
16	chr7:97921145..97922721-chr7:98028895..98030478,2	MCF-7	breast:
17	chr7:97880657..97883457-chr7:97908974..97910800,2	MCF-7	breast:
18	chr7:97896318..97896856-chr7:97916050..97916795,2	MCF-7	breast:
19	chr7:97924336..97925030-chr7:98050387..98050958,2	MCF-7	breast:
20	chr7:97910688..97912984-chr7:97923702..97926466,2	MCF-7	breast:
21	chr7:97923819..97924747-chr7:98030158..98031061,6	K562	blood:
22	chr7:97864661..97867509-chr7:97913185..97914838,2	K562	blood:
23	chr7:97915929..97917893-chr7:97922819..97924333,2	MCF-7	breast:
24	chr7:97896353..97898168-chr7:97898511..97900531,2	K562	blood:
25	chr7:97918116..97920073-chr7:97921586..97924329,2	MCF-7	breast:
26	chr7:97923822..97924821-chr7:98030187..98031111,10	MCF-7	breast:
27	chr7:97900433..97904239-chr7:97908509..97910838,3	K562	blood:
28	chr7:97910672..97912528-chr7:97921384..97923408,2	MCF-7	breast:
29	chr7:97923208..97926071-chr7:98023782..98025314,2	K562	blood:
30	chr7:97913491..97914359-chr7:98050159..98050743,2	MCF-7	breast:
31	chr7:97918116..97920073-chr7:97921586..97924329,2	MCF-7	breast:
32	chr7:97898440..97901255-chr7:97901933..97904418,3	MCF-7	breast:
33	chr7:97919740..97922396-chr7:98029231..98030997,2	K562	blood:
34	chr7:97924546..97926797-chr7:98438099..98441045,2	MCF-7	breast:
35	chr7:97918985..97921240-chr7:97938394..97941365,2	MCF-7	breast:
36	chr7:97863932..97867672-chr7:97911936..97914933,4	K562	blood:
37	chr7:97880609..97882891-chr7:97909884..97913133,3	MCF-7	breast:
38	chr7:97922258..97924610-chr7:97924998..97927065,2	K562	blood:
39	chr7:97913343..97915244-chr7:97915426..97916982,2	MCF-7	breast:
40	chr7:97924800..97928946-chr7:97929492..97932695,4	K562	blood:
41	chr7:97914818..97917026-chr7:98028284..98030510,2	MCF-7	breast:
42	chr7:97921091..97922679-chr7:97923394..97926029,2	MCF-7	breast:
43	chr7:97906466..97912742-chr7:97912887..97917524,14	MCF-7	breast:
44	chr7:97919740..97922168-chr7:98029497..98031239,2	K562	blood:
45	chr7:97915613..97917823-chr7:97941337..97943478,2	MCF-7	breast:
46	chr7:97924619..97926300-chr7:97982191..97983995,2	MCF-7	breast:
47	chr7:97854372..97856436-chr7:97905266..97907266,2	MCF-7	breast:
48	chr7:97924922..97926917-chr7:98029063..98031572,4	MCF-7	breast:
49	chr7:97924265..97924807-chr7:98062373..98062912,2	MCF-7	breast:
50	chr7:97924308..97925809-chr7:98047597..98050461,2	K562	blood:

No data

Variant related genes	Relation type
BRI3	TF binding region
BRI3	CpG island
ENSG00000201558	chromatin interactions
ENSG00000205356	chromatin interactions
ENSG00000149485	chromatin interactions
ENSG00000006453	chromatin interactions
ENSG00000164713	chromatin interactions
ENSG00000272782	chromatin interactions
ENSG00000134824	chromatin interactions
ENSG00000120709	chromatin interactions
ENSG00000233396	chromatin interactions

Extended variants
information (count: 1317 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:1317 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10953253	chr7:97900191-97900192	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs532600847	chr7:97900200-97900201	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs77317276	chr7:97900210-97900211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs559922321	chr7:97900213-97900214	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs530197736	chr7:97900214-97900215	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs548823679	chr7:97900229-97900230	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs570199126	chr7:97900230-97900231	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs569759814	chr7:97900234-97900235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs188742576	chr7:97900253-97900254	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs530434885	chr7:97900288-97900289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs571053737	chr7:97900308-97900309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs144971866	chr7:97900314-97900315	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs553335746	chr7:97900318-97900319	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs574481181	chr7:97900331-97900332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs565465268	chr7:97900354-97900355	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs142040033	chr7:97900388-97900389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs554481733	chr7:97900416-97900417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs576143734	chr7:97900468-97900469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs146021850	chr7:97900549-97900550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs527964099	chr7:97900578-97900579	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs11329173	chr7:97900603-97900604	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs76076800	chr7:97900613-97900614	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs144053732	chr7:97900614-97900615	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs148462707	chr7:97900615-97900616	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs552104892	chr7:97900627-97900628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs558855630	chr7:97900635-97900636	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs554907668	chr7:97900652-97900653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs191028065	chr7:97900658-97900659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs534915717	chr7:97900660-97900661	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs552933564	chr7:97900661-97900662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs112117778	chr7:97900679-97900680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs138791684	chr7:97900684-97900685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs11771953	chr7:97900698-97900699	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs563734964	chr7:97900757-97900758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs369934504	chr7:97900775-97900776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs7787309	chr7:97900826-97900827	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
37	rs4729425	chr7:97900833-97900834	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs571156934	chr7:97900845-97900846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs185402657	chr7:97900873-97900874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs369248458	chr7:97900893-97900894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs371361363	chr7:97900894-97900895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs372418911	chr7:97900895-97900896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs74651744	chr7:97900904-97900905	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs71112134	chr7:97900907-97900908	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs28642266	chr7:97900910-97900911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs547009238	chr7:97900946-97900947	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs565300860	chr7:97900950-97900951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs186735431	chr7:97900951-97900952	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs554599572	chr7:97900965-97900966	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs4729426	chr7:97901058-97901059	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	16750200	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Schizophrenia	17879154	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	16461572	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Cancer	20164920	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Bladder cancer	21909424	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Biliary cancer	19435499	CNVD
Myelofibrosis	22110671	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	16608533	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Liver carcinoma	19366792	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Adenocarcinoma	19607727	CNVD
Multiple myeloma	16461302	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1606 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:97886600-97909800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
2	chr7:97886800-97909200	Weak transcription	Brain Substantia Nigra	brain
3	chr7:97886800-97910000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
4	chr7:97887200-97910000	Weak transcription	Right Ventricle	heart
5	chr7:97887400-97900800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr7:97887400-97908000	Weak transcription	Gastric	stomach
7	chr7:97887400-97910000	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr7:97887600-97905800	Weak transcription	Left Ventricle	heart
9	chr7:97887600-97909600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr7:97888000-97908000	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr7:97891000-97905200	Weak transcription	Liver	Liver
12	chr7:97891000-97909800	Weak transcription	Brain Hippocampus Middle	brain
13	chr7:97891000-97909800	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr7:97891200-97903200	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr7:97891200-97909600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr7:97891200-97909800	Weak transcription	Aorta	Aorta
17	chr7:97891200-97909800	Weak transcription	Brain Cingulate Gyrus	brain
18	chr7:97891400-97901200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr7:97891400-97901200	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr7:97891400-97903000	Weak transcription	Primary B cells from peripheral blood	blood
21	chr7:97891400-97905800	Weak transcription	Pancreas	Pancrea
22	chr7:97891400-97909600	Weak transcription	Primary B cells from cord blood	blood
23	chr7:97891400-97909800	Weak transcription	Rectal Smooth Muscle	rectum
24	chr7:97892000-97900800	Weak transcription	Primary T cells fromperipheralblood	blood
25	chr7:97892000-97901400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
26	chr7:97892000-97903000	Weak transcription	Primary monocytes fromperipheralblood	blood
27	chr7:97892000-97909600	Weak transcription	Rectal Mucosa Donor 29	rectum
28	chr7:97892000-97909800	Weak transcription	Spleen	Spleen
29	chr7:97892600-97909600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr7:97893400-97905800	Weak transcription	Fetal Intestine Small	intestine
31	chr7:97893400-97909200	Weak transcription	Duodenum Mucosa	Duodenum
32	chr7:97894600-97905800	Weak transcription	Lung	lung
33	chr7:97894800-97905800	Weak transcription	Fetal Stomach	stomach
34	chr7:97895600-97907800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr7:97895600-97910000	Weak transcription	HSMM	muscle
36	chr7:97895800-97909800	Weak transcription	Primary T cells from cord blood	blood
37	chr7:97895800-97910000	Weak transcription	Osteobl	bone
38	chr7:97896800-97908000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr7:97896800-97908200	Weak transcription	HSMMtube	muscle
40	chr7:97896800-97909800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr7:97897000-97904400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr7:97897000-97905200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr7:97897000-97905800	Weak transcription	Stomach Smooth Muscle	stomach
44	chr7:97897000-97907600	Weak transcription	Fetal Muscle Leg	muscle
45	chr7:97897000-97909800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr7:97897200-97907600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr7:97900000-97907800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr7:97903000-97903600	Enhancers	Primary B cells from peripheral blood	blood
49	chr7:97903000-97904000	Enhancers	Monocytes-CD14+_RO01746	blood
50	chr7:97903000-97906800	Enhancers	Stomach Mucosa	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links