Variant report

Variant	esv1805472
Chromosome Location	chr10:26685333-26689595
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 188 )
Associated
traits (count: 40 )

Variant overlapped rSNPs/rCNVs (count:188 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12412360	chr10:26685333-26685334	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs144210388	chr10:26685346-26685347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs375053147	chr10:26685349-26685350	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs3006777	chr10:26685357-26685358	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs77849304	chr10:26685360-26685361	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs150114453	chr10:26685395-26685396	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs546717788	chr10:26685445-26685446	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs560321181	chr10:26685541-26685542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs553162567	chr10:26685593-26685594	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs181274466	chr10:26685595-26685596	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs528856772	chr10:26685614-26685615	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs143620027	chr10:26685632-26685633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs558763253	chr10:26685640-26685641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs185520955	chr10:26685672-26685673	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs532949835	chr10:26685673-26685674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs145496271	chr10:26685675-26685676	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs375650252	chr10:26685681-26685682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs188714797	chr10:26685682-26685683	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs180748767	chr10:26685760-26685761	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs370400972	chr10:26685773-26685774	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs367663113	chr10:26685777-26685778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs540336533	chr10:26685790-26685791	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs537069207	chr10:26685802-26685803	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs532052882	chr10:26685803-26685804	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs551602986	chr10:26685877-26685878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs113526292	chr10:26685890-26685891	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs531122414	chr10:26685906-26685907	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs550948770	chr10:26685916-26685917	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs567675359	chr10:26685930-26685931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs546722853	chr10:26685973-26685974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs536219381	chr10:26685990-26685991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs553316900	chr10:26686067-26686068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs201305809	chr10:26686102-26686103	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs11015087	chr10:26686103-26686104	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs2992294	chr10:26686106-26686107	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs143773268	chr10:26686108-26686109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs575463471	chr10:26686135-26686136	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs544515550	chr10:26686136-26686137	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs3006776	chr10:26686142-26686143	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs191901470	chr10:26686146-26686147	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs539873459	chr10:26686177-26686178	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs143163610	chr10:26686192-26686193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs184190607	chr10:26686197-26686198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs148247539	chr10:26686203-26686204	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs376665872	chr10:26686204-26686205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs548722220	chr10:26686239-26686240	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs548877588	chr10:26686244-26686245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs530986200	chr10:26686249-26686250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs551274219	chr10:26686289-26686290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs567899445	chr10:26686377-26686378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:40)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
small cell lung cancer	20016488	CNVD
Behavioral abnormalities	21522184	CNVD
Dysmorphic features	21522184	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Myelofibrosis	22110671	CNVD
Autism	21439084	CNVD
Maculopathy	20981449	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Adrenocortical carcinoma	18281524	CNVD
Breast cancer	21364760	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26681600-26688200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:26681600-26694200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:26689200-26689400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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