Variant report

Variant esv1807557
Chromosome Location chr6:140943682-141045961
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:223 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:140930400-140947200 Weak transcription Placenta Placenta
2 chr6:140936800-140945000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr6:140942200-140945400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr6:140944200-140945000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr6:140944400-140945200 Enhancers NHEK skin
6 chr6:140944400-140945400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr6:140944400-140945400 Enhancers HSMM muscle
8 chr6:140944600-140945600 Enhancers Muscle Satellite Cultured Cells --
9 chr6:140944800-140945000 Enhancers NH-A brain
10 chr6:140944800-140945400 Enhancers Pancreatic Islets Pancreatic Islet
11 chr6:140944800-140945400 Enhancers Fetal Lung lung
12 chr6:140944800-140945600 Enhancers Ovary ovary
13 chr6:140944800-140945600 Enhancers HMEC breast
14 chr6:140945000-140945600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr6:140945000-140946600 Weak transcription NH-A brain
16 chr6:140945400-140945600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr6:140945600-140946200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:140945600-140946600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr6:140946200-140946400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr6:140946600-140948600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr6:140947000-140948200 ZNF genes & repeats H1 Cell Line embryonic stem cell
22 chr6:140947200-140948400 ZNF genes & repeats Placenta Placenta
23 chr6:140947600-140948200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr6:140947600-140948400 ZNF genes & repeats Aorta Aorta
25 chr6:140948200-140948400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
26 chr6:140948600-140991200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:140949000-140957400 Weak transcription Right Atrium heart
28 chr6:140954200-140954800 Enhancers Fetal Heart heart
29 chr6:140954800-140956800 Weak transcription Fetal Heart heart
30 chr6:140956600-140957200 Enhancers Pancreatic Islets Pancreatic Islet
31 chr6:140956800-140958000 Enhancers Fetal Heart heart
32 chr6:140956800-140958400 Enhancers iPS-15b Cell Line embryonic stem cell
33 chr6:140957200-140957400 Enhancers Brain Germinal Matrix brain
34 chr6:140957200-140957400 Enhancers Fetal Brain Female brain
35 chr6:140957200-140957400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
36 chr6:140957200-140958200 Active TSS Brain Anterior Caudate brain
37 chr6:140957400-140957600 Enhancers Cortex derived primary cultured neurospheres brain
38 chr6:140957400-140957600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
39 chr6:140957400-140957600 Active TSS GM12878-XiMat blood
40 chr6:140957400-140957800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr6:140957400-140957800 Enhancers Primary B cells from peripheral blood blood
42 chr6:140957400-140957800 Enhancers Fetal Kidney kidney
43 chr6:140957400-140958000 Active TSS Brain Angular Gyrus brain
44 chr6:140957400-140958000 Flanking Active TSS Brain Germinal Matrix brain
45 chr6:140957400-140958000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
46 chr6:140957400-140958200 Active TSS Brain Cingulate Gyrus brain
47 chr6:140957400-140958200 Active TSS Brain Hippocampus Middle brain
48 chr6:140957400-140958200 Active TSS Brain Inferior Temporal Lobe brain
49 chr6:140957400-140958200 Active TSS Brain Substantia Nigra brain
50 chr6:140957400-140958200 Active TSS Right Atrium heart

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