Variant report
Variant | esv1807804 |
---|---|
Chromosome Location | chr22:21726851-21928852 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4596)
- CpG islands (count:2504)
- Chromatin interactive region (count:38)
- LncRNA region (count:8)
- Mature miRNA region (count: 0)
- miRNA target sites (count:3)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21924760-21925759 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr22:21922578-21923467 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr22:21811453-21812088 | HepG2 | liver: | n/a | n/a |
4 | ARID3A | chr22:21921709-21922373 | K562 | blood: | n/a | n/a |
5 | ARID3A | chr22:21921788-21922241 | HepG2 | liver: | n/a | n/a |
6 | ARID3A | chr22:21910418-21910628 | HepG2 | liver: | n/a | n/a |
7 | ARID3A | chr22:21910246-21910718 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr22:21822456-21822596 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr22:21925330-21925768 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr22:21910267-21910662 | K562 | blood: | n/a | n/a |
11 | ATF2 | chr22:21921724-21922055 | GM12878 | blood: | n/a | n/a |
12 | ATF3 | chr22:21910129-21910721 | K562 | blood: | n/a | n/a |
13 | ATF3 | chr22:21866127-21866289 | K562 | blood: | n/a | n/a |
14 | ATF3 | chr22:21799163-21799497 | K562 | blood: | n/a | n/a |
15 | ATF3 | chr22:21921667-21923179 | K562 | blood: | n/a | chr22:21921934-21921943 |
16 | ATF3 | chr22:21910162-21910876 | K562 | blood: | n/a | n/a |
17 | ATF3 | chr22:21921624-21922242 | K562 | blood: | n/a | chr22:21921934-21921943 |
18 | BACH1 | chr22:21810600-21810850 | H1-hESC | embryonic stem cell: | n/a | n/a |
19 | BACH1 | chr22:21910262-21910699 | K562 | blood: | n/a | n/a |
20 | BACH1 | chr22:21921746-21922104 | H1-hESC | embryonic stem cell: | n/a | n/a |
21 | BACH1 | chr22:21921759-21922196 | K562 | blood: | n/a | n/a |
22 | BACH1 | chr22:21919019-21919137 | K562 | blood: | n/a | n/a |
23 | BATF | chr22:21822965-21823191 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr22:21871643-21871836 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr22:21754245-21754462 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr22:21822372-21822581 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr22:21888942-21889159 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr22:21738444-21738711 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr22:21771592-21771785 | GM12878 | blood: | n/a | n/a |
30 | BCL11A | chr22:21868416-21868688 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr22:21754133-21754406 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr22:21888998-21889271 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr22:21738418-21738724 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr22:21904654-21904960 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr22:21774746-21775018 | GM12878 | blood: | n/a | n/a |
36 | BCL3 | chr22:21801935-21802305 | GM12878 | blood: | n/a | n/a |
37 | BCL3 | chr22:21805322-21806524 | K562 | blood: | n/a | n/a |
38 | BCL3 | chr22:21910210-21910678 | A549 | lung: | n/a | n/a |
39 | BCL3 | chr22:21921732-21922109 | A549 | lung: | n/a | chr22:21921934-21921947 |
40 | BCL3 | chr22:21805261-21805733 | K562 | blood: | n/a | n/a |
41 | BCL3 | chr22:21811292-21811869 | A549 | lung: | n/a | n/a |
42 | BCL3 | chr22:21801993-21802294 | GM12878 | blood: | n/a | n/a |
43 | BCLAF1 | chr22:21921728-21922316 | GM12878 | blood: | n/a | chr22:21921934-21921947 |
44 | BCLAF1 | chr22:21921648-21924073 | K562 | blood: | n/a | chr22:21921934-21921947 |
45 | BCLAF1 | chr22:21921653-21922354 | GM12878 | blood: | n/a | chr22:21921934-21921947 |
46 | BHLHE40 | chr22:21822115-21822324 | HepG2 | liver: | n/a | n/a |
47 | BHLHE40 | chr22:21924120-21924618 | GM12878 | blood: | n/a | n/a |
48 | BHLHE40 | chr22:21864628-21865020 | HepG2 | liver: | n/a | chr22:21864696-21864712 |
49 | BHLHE40 | chr22:21889022-21889308 | HepG2 | liver: | n/a | n/a |
50 | BHLHE40 | chr22:21802435-21802617 | K562 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21922038-21922088 | HRPEpiC | eye: | n/a |
2 | chr22:21921839-21921889 | HL-60 | blood: | n/a |
3 | chr22:21820215-21820265 | GM12891 | blood: | n/a |
4 | chr22:21922038-21922088 | HRPEpiC | eye: | n/a |
5 | chr22:21921839-21921889 | HL-60 | blood: | n/a |
6 | chr22:21820215-21820265 | GM12891 | blood: | n/a |
7 | chr22:21804711-21804761 | Jurkat | blood: | n/a |
8 | chr22:21821976-21822026 | ECC-1 | luminal epithelium: | n/a |
9 | chr22:21921743-21921793 | HIPEpiC | eye: | n/a |
10 | chr22:21821976-21822026 | MCF10A-Er-Src | breast: | n/a |
11 | chr22:21801764-21801814 | K562 | blood: | n/a |
12 | chr22:21820215-21820265 | AG09309 | skin: | n/a |
13 | chr22:21871920-21871970 | GM12878 | blood: | n/a |
14 | chr22:21922804-21922854 | NHBE | bronchial: | n/a |
15 | chr22:21921879-21921929 | BE2_C | brain: | n/a |
16 | chr22:21798159-21798209 | SKMC | muscle: | n/a |
17 | chr22:21817930-21817980 | SAEC | small airway: | n/a |
18 | chr22:21820215-21820265 | LNCaP | prostate: | n/a |
19 | chr22:21774669-21774719 | MCF-7 | breast: | n/a |
20 | chr22:21772272-21772322 | Jurkat | blood: | n/a |
21 | chr22:21921269-21921319 | BE2_C | brain: | n/a |
22 | chr22:21921881-21921931 | GM06990 | blood: | n/a |
23 | chr22:21921833-21921883 | U87 | brain: | n/a |
24 | chr22:21774669-21774719 | GM12891 | blood: | n/a |
25 | chr22:21770855-21770905 | U87 | brain: | n/a |
26 | chr22:21921879-21921929 | HCPEpiC | choroid plexus: | n/a |
27 | chr22:21921828-21921878 | HUVEC | blood vessel: | n/a |
28 | chr22:21774669-21774719 | CMK | blood: | n/a |
29 | chr22:21821976-21822026 | GM12891 | blood: | n/a |
30 | chr22:21822779-21822829 | MCF-7 | breast: | n/a |
31 | chr22:21770855-21770905 | HUVEC | blood vessel: | n/a |
32 | chr22:21798794-21798844 | SK-N-SH | brain: | n/a |
33 | chr22:21817930-21817980 | CMK | blood: | n/a |
34 | chr22:21773494-21773544 | HCF | heart: | n/a |
35 | chr22:21921731-21921781 | SKMC | muscle: | n/a |
36 | chr22:21820215-21820265 | ovcar-3 | ovarian: | n/a |
37 | chr22:21822779-21822829 | AG09309 | skin: | n/a |
38 | chr22:21802598-21802648 | BE2_C | brain: | n/a |
39 | chr22:21802598-21802648 | HPAEpiC | pulmonary alveolar: | n/a |
40 | chr22:21921828-21921878 | GM12878 | blood: | n/a |
41 | chr22:21922804-21922854 | SK-N-SH | brain: | n/a |
42 | chr22:21867049-21867099 | AG04450 | lung: | fetal |
43 | chr22:21822779-21822829 | HRE | kidney: | n/a |
44 | chr22:21921269-21921319 | HCPEpiC | choroid plexus: | n/a |
45 | chr22:21921881-21921931 | HRE | kidney: | n/a |
46 | chr22:21922804-21922854 | HRCEpiC | kidney: | n/a |
47 | chr22:21921869-21921919 | AG10803 | skin: | n/a |
48 | chr22:21871914-21871964 | Caco-2 | colon: | n/a |
49 | chr22:21921833-21921883 | HRCEpiC | kidney: | n/a |
50 | chr22:21921839-21921889 | AG04450 | lung: | fetal |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21808392..21810710-chr22:21921341..21923915,2 | K562 | blood: | |
2 | chr22:21920727..21924429-chr22:22006455..22008474,3 | MCF-7 | breast: | |
3 | chr22:21918848..21920775-chr22:21921209..21923863,3 | MCF-7 | breast: | |
4 | chr22:21821074..21822903-chr22:21982952..21985553,3 | K562 | blood: | |
5 | chr22:21922090..21924831-chr5:33485334..33486835,3 | K562 | blood: | |
6 | chr22:21910242..21911830-chr22:21925513..21928236,2 | K562 | blood: | |
7 | chr22:21801362..21804188-chr22:22036295..22038184,2 | K562 | blood: | |
8 | chr22:21922720..21924374-chr22:21936117..21937710,2 | MCF-7 | breast: | |
9 | chr22:21810804..21813538-chr22:21813549..21815062,2 | K562 | blood: | |
10 | chr22:21802032..21802554-chr22:22000750..22001398,2 | K562 | blood: | |
11 | chr22:21821085..21824065-chr22:21983565..21985249,2 | K562 | blood: | |
12 | chr22:21757262..21759399-chr22:21922328..21924805,2 | K562 | blood: | |
13 | chr22:21802884..21804534-chr22:21977171..21979118,2 | K562 | blood: | |
14 | chr22:21921034..21925776-chr22:21981790..21988067,8 | MCF-7 | breast: | |
15 | chr22:21805758..21807437-chr22:21977909..21980793,2 | K562 | blood: | |
16 | chr22:21927017..21928821-chr22:21931714..21933349,2 | MCF-7 | breast: | |
17 | chr22:21810804..21813538-chr22:21813549..21815062,2 | K562 | blood: | |
18 | chr22:21807608..21809744-chr22:21982806..21985295,2 | K562 | blood: | |
19 | chr22:21910242..21911830-chr22:21925513..21928236,2 | K562 | blood: | |
20 | chr12:89917592..89920413-chr22:21802852..21804467,2 | MCF-7 | breast: | |
21 | chr22:21910454..21912029-chr22:22004763..22007007,2 | MCF-7 | breast: | |
22 | chr22:21908736..21910357-chr22:21980107..21982427,2 | K562 | blood: | |
23 | chr22:21921535..21923886-chr22:21982326..21985629,8 | MCF-7 | breast: | |
24 | chr22:21771959..21773481-chr22:21799015..21800950,2 | K562 | blood: | |
25 | chr22:21271132..21271932-chr22:21924238..21924787,2 | K562 | blood: | |
26 | chr22:21801167..21803147-chr22:21981640..21983614,2 | K562 | blood: | |
27 | chr22:21799835..21803948-chr22:22005820..22007869,4 | K562 | blood: | |
28 | chr22:21920647..21924218-chr22:21994881..21998096,5 | MCF-7 | breast: | |
29 | chr22:21910278..21913507-chr22:21994549..21997856,3 | K562 | blood: | |
30 | chr20:49546476..49548738-chr22:21921516..21923782,2 | K562 | blood: | |
31 | chr22:21799659..21804135-chr22:21977326..21984068,6 | K562 | blood: | |
32 | chr22:21771959..21773481-chr22:21799015..21800950,2 | K562 | blood: | |
33 | chr22:21921936..21923666-chr22:22337119..22338762,2 | K562 | blood: | |
34 | chr22:21924198..21925733-chr22:21954997..21956640,2 | MCF-7 | breast: | |
35 | chr22:21800442..21802407-chr22:21977326..21979370,2 | K562 | blood: | |
36 | chr22:21757262..21759399-chr22:21922328..21924805,2 | K562 | blood: | |
37 | chr22:21804862..21806367-chr22:21977646..21980199,2 | K562 | blood: | |
38 | chr1:8268048..8269728-chr22:21922125..21923933,2 | MCF-7 | breast: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-RIMBP3C-2 | chr22:21846265-21846383 | NONHSAT083686 |
2 | lnc-RIMBP3C-1 | chr22:21899633-21899933 | NONHSAT083690 |
3 | lnc-RIMBP3C-3 | chr22:21803801-21805329 | NONHSAT083673 |
4 | lnc-HIC2-1 | chr22:21820783-21821265 | ENSG00000206140 |
5 | lnc-RIMBP3B-2 | chr22:21726368-21726939 | l_2251_chr22:21725710-21727925_testes |
6 | lnc-RIMBP3B-2 | chr22:21727743-21727925 | l_2251_chr22:21725710-21727925_testes |
7 | lnc-RIMBP3C-2 | chr22:21868423-21868512 | NONHSAT083686 |
8 | lnc-RIMBP3B-1 | chr22:21743480-21743780 | NONHSAT083665 |
No data |
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No. | miRNA target gene | miRNA name | Chromosome Location | mirBase accession |
---|---|---|---|---|
1 | HIC2 | hsa-miR-24-3p | chr22:21801714-21801720 | |
2 | HIC2 | hsa-miR-30b-5p | chr22:21803819-21803840 | |
3 | HIC2 | hsa-miR-30b-5p | chr22:21803833-21803840 |
Variant related genes | Relation type |
---|---|
ENSG00000252020 | TF binding region |
RN7SKP221 | TF binding region |
ENSG00000252143 | TF binding region |
ENSG00000252799 | TF binding region |
TMEM191C | TF binding region |
ENSG00000252314 | TF binding region |
RN7SKP63 | TF binding region |
ENSG00000252605 | TF binding region |
RIMBP3B | TF binding region |
RIMBP3C | TF binding region |
ENSG00000252402 | TF binding region |
HIC2 | TF binding region |
UBE2L3 | TF binding region |
PI4KAP2 | TF binding region |
ENSG00000252020 | CpG island |
RN7SKP221 | CpG island |
ENSG00000252143 | CpG island |
ENSG00000252799 | CpG island |
TMEM191C | CpG island |
ENSG00000252314 | CpG island |
RN7SKP63 | CpG island |
ENSG00000252605 | CpG island |
RIMBP3B | CpG island |
RIMBP3C | CpG island |
ENSG00000252402 | CpG island |
HIC2 | CpG island |
UBE2L3 | CpG island |
PI4KAP2 | CpG island |
ENSG00000257594 | chromatin interactions |
ENSG00000161180 | chromatin interactions |
ENSG00000207751 | chromatin interactions |
ENSG00000100038 | chromatin interactions |
ENSG00000259456 | chromatin interactions |
ENSG00000099942 | chromatin interactions |
ENSG00000270344 | chromatin interactions |
ENSG00000161179 | chromatin interactions |
ENSG00000139323 | chromatin interactions |
ENSG00000185651 | chromatin interactions |
ENSG00000259075 | chromatin interactions |
ENSG00000227634 | chromatin interactions |
ENSG00000212102 | chromatin interactions |
ENSG00000100023 | chromatin interactions |
ENSG00000101126 | chromatin interactions |
ENSG00000273342 | chromatin interactions |
ENSG00000128228 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs550997691 | chr22:21727768-21727769 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
2 | rs567410689 | chr22:21727815-21727816 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
3 | rs566803312 | chr22:21727838-21727839 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
4 | rs5753216 | chr22:21727849-21727850 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
5 | rs536305590 | chr22:21727918-21727919 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
6 | rs192592373 | chr22:21733744-21733745 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs112637909 | chr22:21733775-21733776 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs572049676 | chr22:21734773-21734774 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs368673883 | chr22:21734810-21734811 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs540938262 | chr22:21734822-21734823 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs370053626 | chr22:21734889-21734890 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs374223437 | chr22:21734909-21734910 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs367832722 | chr22:21734936-21734937 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs78724466 | chr22:21735010-21735011 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs79190531 | chr22:21735049-21735050 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs534451838 | chr22:21736388-21736389 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs548110751 | chr22:21736484-21736485 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs9609294 | chr22:21736675-21736676 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs570399370 | chr22:21736918-21736919 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs539075989 | chr22:21736941-21736942 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs469598 | chr22:21736946-21736947 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs541191162 | chr22:21737095-21737096 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs556208113 | chr22:21737147-21737148 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs200924625 | chr22:21738923-21738924 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs576084083 | chr22:21739212-21739213 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs201364657 | chr22:21739333-21739334 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs199912426 | chr22:21740314-21740315 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs201528102 | chr22:21740619-21740620 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs571914641 | chr22:21741372-21741373 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs468588 | chr22:21741420-21741421 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs540899678 | chr22:21741432-21741433 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs564241091 | chr22:21741445-21741446 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs577154748 | chr22:21741497-21741498 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs545908955 | chr22:21741506-21741507 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs375396477 | chr22:21741586-21741587 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs201550629 | chr22:21741935-21741936 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs200259378 | chr22:21742066-21742067 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs199570195 | chr22:21742279-21742280 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs202011105 | chr22:21742389-21742390 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs9606856 | chr22:21742426-21742427 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs468931 | chr22:21742598-21742599 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs538343831 | chr22:21742628-21742629 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs200696386 | chr22:21742680-21742681 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs200026599 | chr22:21742681-21742682 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs200610234 | chr22:21742684-21742685 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs548707753 | chr22:21742700-21742701 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs562215818 | chr22:21742707-21742708 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs527908257 | chr22:21742734-21742735 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs267606181 | chr22:21742741-21742742 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs548074561 | chr22:21742742-21742743 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Asthma | 21956041 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Medulloblastoma | 21163964 | CNVD |
Glioma | 20126413 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21756400-21756600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
2 | chr22:21756400-21757200 | Enhancers | K562 | blood |
3 | chr22:21756400-21757400 | Enhancers | Primary monocytes fromperipheralblood | blood |
4 | chr22:21756400-21757400 | Enhancers | Monocytes-CD14+_RO01746 | blood |
5 | chr22:21756400-21757600 | Active TSS | HepG2 | liver |
6 | chr22:21757200-21757400 | Flanking Active TSS | K562 | blood |
7 | chr22:21757400-21757800 | Enhancers | K562 | blood |
8 | chr22:21757600-21757800 | Flanking Active TSS | HepG2 | liver |
9 | chr22:21757600-21758000 | Enhancers | Fetal Intestine Large | intestine |
10 | chr22:21770400-21770600 | Enhancers | K562 | blood |
11 | chr22:21770600-21770800 | Enhancers | Primary T cells fromperipheralblood | blood |
12 | chr22:21770600-21771000 | Active TSS | HUES64 Cell Line | embryonic stem cell |
13 | chr22:21770600-21771000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
14 | chr22:21770600-21771000 | Enhancers | Primary T helper cells fromperipheralblood | blood |
15 | chr22:21770600-21771000 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
16 | chr22:21770600-21771000 | Active TSS | HepG2 | liver |
17 | chr22:21770600-21771000 | Flanking Active TSS | K562 | blood |
18 | chr22:21770600-21772400 | Active TSS | H1 Cell Line | embryonic stem cell |
19 | chr22:21770800-21771000 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
20 | chr22:21770800-21771000 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
21 | chr22:21770800-21771000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
22 | chr22:21770800-21771000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
23 | chr22:21770800-21771000 | Enhancers | Adipose Nuclei | Adipose |
24 | chr22:21770800-21771000 | Enhancers | Monocytes-CD14+_RO01746 | blood |
25 | chr22:21770800-21772200 | Weak transcription | Primary T cells fromperipheralblood | blood |
26 | chr22:21771000-21771600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
27 | chr22:21771000-21772000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
28 | chr22:21771000-21772000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
29 | chr22:21771000-21772000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
30 | chr22:21771000-21772000 | Weak transcription | K562 | blood |
31 | chr22:21771000-21772000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
32 | chr22:21771000-21772200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
33 | chr22:21771000-21773200 | Weak transcription | HepG2 | liver |
34 | chr22:21771600-21772000 | Active TSS | Sigmoid Colon | Sigmoid Colon |
35 | chr22:21771600-21772200 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
36 | chr22:21771600-21772200 | Active TSS | Gastric | stomach |
37 | chr22:21771600-21772400 | Active TSS | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
38 | chr22:21771600-21772400 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
39 | chr22:21771600-21772400 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
40 | chr22:21771600-21772400 | Active TSS | H9 Cell Line | embryonic stem cell |
41 | chr22:21771600-21772400 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
42 | chr22:21771600-21772400 | Active TSS | Cortex derived primary cultured neurospheres | brain |
43 | chr22:21771600-21772400 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
44 | chr22:21771600-21772400 | Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
45 | chr22:21771600-21772400 | Active TSS | Aorta | Aorta |
46 | chr22:21771600-21772400 | Active TSS | Esophagus | oesophagus |
47 | chr22:21771600-21772400 | Active TSS | Pancreatic Islets | Pancreatic Islet |
48 | chr22:21771600-21772400 | Active TSS | Left Ventricle | heart |
49 | chr22:21771600-21772400 | Active TSS | Ovary | ovary |
50 | chr22:21771600-21772400 | Active TSS | Psoas Muscle | Psoas |