Variant report
Variant | esv1809118 |
---|---|
Chromosome Location | chr11:4782207-4843426 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:111)
- CpG islands (count:549)
- Chromatin interactive region (count:27)
- LncRNA region (count:3)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF1 | chr11:4793218-4793283 | K562 | blood: | n/a | n/a |
2 | CEBPB | chr11:4815769-4815953 | K562 | blood: | n/a | n/a |
3 | CEBPB | chr11:4802820-4802858 | K562 | blood: | n/a | chr11:4802839-4802852 chr11:4802839-4802852 chr11:4802841-4802852 |
4 | CEBPB | chr11:4811479-4811616 | K562 | blood: | n/a | n/a |
5 | CEBPB | chr11:4786195-4786260 | HepG2 | liver: | n/a | chr11:4786226-4786237 |
6 | CTCF | chr11:4804240-4804390 | GM12868 | blood: | n/a | n/a |
7 | CTCF | chr11:4804240-4804390 | GM06990 | blood: | n/a | n/a |
8 | CTCF | chr11:4804240-4804390 | GM12872 | blood: | n/a | n/a |
9 | CTCF | chr11:4804260-4804410 | GM12864 | blood: | n/a | n/a |
10 | CTCF | chr11:4820319-4820345 | GM10248 | blood: | n/a | n/a |
11 | CTCF | chr11:4804280-4804430 | GM12871 | blood: | n/a | n/a |
12 | CTCF | chr11:4804200-4804350 | AG04449 | skin: | n/a | n/a |
13 | CTCF | chr11:4802760-4802868 | K562 | blood: | n/a | n/a |
14 | CTCF | chr11:4804220-4804370 | GM12866 | blood: | n/a | n/a |
15 | CTCF | chr11:4804259-4804393 | GM12878 | blood: | n/a | n/a |
16 | CTCF | chr11:4804254-4804393 | K562 | blood: | n/a | n/a |
17 | CTCF | chr11:4804220-4804370 | GM06990 | blood: | n/a | n/a |
18 | CTCF | chr11:4804240-4804390 | HEK293 | kidney: | n/a | n/a |
19 | CTCF | chr11:4804220-4804370 | HBMEC | blood vessel: | n/a | n/a |
20 | CTCF | chr11:4804220-4804370 | GM12865 | blood: | n/a | n/a |
21 | CTCF | chr11:4836412-4836468 | GM20000 | blood: | n/a | n/a |
22 | CTCF | chr11:4804260-4804410 | GM12872 | blood: | n/a | n/a |
23 | CTCF | chr11:4804400-4804550 | GM12878 | blood: | n/a | n/a |
24 | CTCF | chr11:4804220-4804370 | GM12864 | blood: | n/a | n/a |
25 | CTCF | chr11:4804190-4804400 | GM12878 | blood: | n/a | n/a |
26 | CTCF | chr11:4804272-4804394 | K562 | blood: | n/a | n/a |
27 | CTCF | chr11:4804260-4804410 | GM12871 | blood: | n/a | n/a |
28 | CTCF | chr11:4804220-4804370 | GM12870 | blood: | n/a | n/a |
29 | CTCF | chr11:4804200-4804350 | GM12874 | blood: | n/a | n/a |
30 | CTCF | chr11:4804260-4804410 | AG04449 | skin: | n/a | n/a |
31 | CTCF | chr11:4804220-4804370 | GM12878 | blood: | n/a | n/a |
32 | CTCF | chr11:4804240-4804390 | WERI-Rb-1 | eye: | n/a | n/a |
33 | CTCF | chr11:4804240-4804390 | GM12873 | blood: | n/a | n/a |
34 | CTCF | chr11:4804247-4804395 | IMR90 | lung: | n/a | n/a |
35 | CTCF | chr11:4802939-4802988 | ProgFib | skin: | n/a | n/a |
36 | CTCF | chr11:4804278-4804380 | GM19238 | blood: | n/a | n/a |
37 | CTCF | chr11:4804220-4804370 | GM12875 | blood: | n/a | n/a |
38 | CTCF | chr11:4804340-4804490 | WI-38 | lung: | n/a | n/a |
39 | CTCF | chr11:4807280-4807430 | HEK293 | kidney: | n/a | n/a |
40 | CTCF | chr11:4804260-4804410 | GM12874 | blood: | n/a | n/a |
41 | CTCF | chr11:4804278-4804347 | GM19239 | blood: | n/a | n/a |
42 | CTCF | chr11:4804220-4804370 | K562 | blood: | n/a | n/a |
43 | CTCF | chr11:4804160-4804310 | GM12867 | blood: | n/a | n/a |
44 | CTCF | chr11:4804200-4804409 | K562 | blood: | n/a | n/a |
45 | CTCF | chr11:4804240-4804390 | GM12869 | blood: | n/a | n/a |
46 | CTCF | chr11:4804300-4804450 | GM12864 | blood: | n/a | n/a |
47 | CTCF | chr11:4804255-4804390 | GM12891 | blood: | n/a | n/a |
48 | CTCF | chr11:4804260-4804410 | AG04450 | lung: | n/a | n/a |
49 | CTCF | chr11:4804273-4804341 | GM19240 | blood: | n/a | n/a |
50 | CTCF | chr11:4804244-4804343 | GM13977 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:4825232-4825282 | HRE | kidney: | n/a |
2 | chr11:4791012-4791062 | HCPEpiC | choroid plexus: | n/a |
3 | chr11:4825232-4825282 | CMK | blood: | n/a |
4 | chr11:4843021-4843071 | BJ | skin: | n/a |
5 | chr11:4825815-4825865 | SKMC | muscle: | n/a |
6 | chr11:4791012-4791062 | Hepatocyte | liver: | n/a |
7 | chr11:4842355-4842405 | HRCEpiC | kidney: | n/a |
8 | chr11:4792272-4792322 | U87 | brain: | n/a |
9 | chr11:4791012-4791062 | HCM | heart: | n/a |
10 | chr11:4791012-4791062 | NH-A | brain: | n/a |
11 | chr11:4824704-4824754 | PANC-1 | pancreas: | n/a |
12 | chr11:4841204-4841254 | HRE | kidney: | n/a |
13 | chr11:4825232-4825282 | A549 | lung: | n/a |
14 | chr11:4842355-4842405 | Hepatocyte | liver: | n/a |
15 | chr11:4842355-4842405 | HCT-116 | colon: | n/a |
16 | chr11:4824704-4824754 | NHDF-neo | bronchial: | n/a |
17 | chr11:4843021-4843071 | HAEpiC | amniotic membrane: | n/a |
18 | chr11:4825815-4825865 | HCT-116 | colon: | n/a |
19 | chr11:4824704-4824754 | GM19239 | blood: | n/a |
20 | chr11:4791012-4791062 | HNPCEpiC | eye: | n/a |
21 | chr11:4842355-4842405 | GM19239 | blood: | n/a |
22 | chr11:4843021-4843071 | Jurkat | blood: | n/a |
23 | chr11:4792272-4792322 | CMK | blood: | n/a |
24 | chr11:4843021-4843071 | HRCEpiC | kidney: | n/a |
25 | chr11:4842355-4842405 | HPAEpiC | pulmonary alveolar: | n/a |
26 | chr11:4825640-4825690 | AG10803 | skin: | n/a |
27 | chr11:4825640-4825690 | BE2_C | brain: | n/a |
28 | chr11:4792272-4792322 | GM06990 | blood: | n/a |
29 | chr11:4843021-4843071 | NH-A | brain: | n/a |
30 | chr11:4825640-4825690 | ECC-1 | luminal epithelium: | n/a |
31 | chr11:4824704-4824754 | LNCaP | prostate: | n/a |
32 | chr11:4792272-4792322 | PFSK-1 | brain: | n/a |
33 | chr11:4841204-4841254 | HCF | heart: | n/a |
34 | chr11:4841204-4841254 | AG10803 | skin: | n/a |
35 | chr11:4825232-4825282 | HPAEpiC | pulmonary alveolar: | n/a |
36 | chr11:4825815-4825865 | GM12891 | blood: | n/a |
37 | chr11:4841204-4841254 | NB4 | blood: | n/a |
38 | chr11:4842355-4842405 | SK-N-MC | brain: | n/a |
39 | chr11:4791012-4791062 | ovcar-3 | ovarian: | n/a |
40 | chr11:4792272-4792322 | ECC-1 | luminal epithelium: | n/a |
41 | chr11:4792272-4792322 | HepG2 | liver: | n/a |
42 | chr11:4824704-4824754 | AG09319 | gingival: | n/a |
43 | chr11:4842355-4842405 | T-47D | breast: | n/a |
44 | chr11:4842355-4842405 | CMK | blood: | n/a |
45 | chr11:4841204-4841254 | T-47D | breast: | n/a |
46 | chr11:4792272-4792322 | HCM | heart: | n/a |
47 | chr11:4842355-4842405 | SAEC | small airway: | n/a |
48 | chr11:4842355-4842405 | NB4 | blood: | n/a |
49 | chr11:4791012-4791062 | AG09309 | skin: | n/a |
50 | chr11:4825232-4825282 | AoSMC | blood vessel: | n/a |
(count:27 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | 11:4778081-4789138..11:5033143-5038367 | K562 | blood: | |
2 | 11:4801044-4820112..11:5700314-5707362 | H1-hESC | embryonic stem cell: | embryo |
3 | 11:4820112-4824892..11:5018576-5020673 | H1-hESC | embryonic stem cell: | embryo |
4 | chr11:4783931..4787132-chr11:4790389..4793666,3 | K562 | blood: | |
5 | 11:4778081-4789138..11:5740069-5747001 | K562 | blood: | |
6 | chr11:4822926..4825841-chr11:4830287..4832476,2 | K562 | blood: | |
7 | chr11:4778466..4780961-chr11:4783951..4785593,2 | K562 | blood: | |
8 | 11:4794705-4799792..11:5527719-5533869 | GM12878 | blood: | |
9 | 11:4820112-4824892..11:5700314-5707362 | K562 | blood: | |
10 | chr11:4785049..4787150-chr11:4787794..4789663,2 | K562 | blood: | |
11 | 11:4789513-4794705..11:4988858-5002113 | Hela-S3 | cervix: | |
12 | 11:4789513-4794705..11:5380014-5384338 | H1-hESC | embryonic stem cell: | embryo |
13 | chr11:4822926..4825696-chr11:4829994..4831787,2 | K562 | blood: | |
14 | 11:4820112-4824892..11:5527719-5533869 | H1-hESC | embryonic stem cell: | embryo |
15 | 11:4820112-4824892..11:5721056-5732713 | H1-hESC | embryonic stem cell: | embryo |
16 | 11:4794705-4799792..11:5714465-5718134 | H1-hESC | embryonic stem cell: | embryo |
17 | 11:4778081-4789138..11:4988858-5002113 | Hela-S3 | cervix: | |
18 | 11:4794705-4799792..11:5721056-5732713 | K562 | blood: | |
19 | chr11:4789671..4792092-chr11:4812812..4815235,2 | K562 | blood: | |
20 | chr11:4806483..4808284-chr11:4810226..4812694,2 | K562 | blood: | |
21 | 11:4789513-4794705..11:5033143-5038367 | K562 | blood: | |
22 | 11:4794705-4799792..11:5700314-5707362 | K562 | blood: | |
23 | chr11:4780407..4782336-chr11:4786292..4788948,2 | K562 | blood: | |
24 | chr11:4817686..4819750-chr11:4821906..4823690,2 | K562 | blood: | |
25 | chr11:4776926..4782057-chr11:4782402..4785593,4 | K562 | blood: | |
26 | 11:4789513-4794705..11:4799792-4801044 | GM12878 | blood: | |
27 | chr11:4817686..4819750-chr11:4821906..4823690,2 | K562 | blood: |
(count:3 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-MMP26-1 | chr11:4788500-4788571 | NONHSAT017654 |
2 | lnc-OR52R1-1 | chr11:4816146-4816514 | NONHSAT017656 |
3 | lnc-OR52R1-1 | chr11:4815008-4815466 | NONHSAT017656 |
No data |
No data |
Variant related genes | Relation type |
---|---|
OR51N1P | TF binding region |
OR52R1 | TF binding region |
OR51F1 | TF binding region |
OR51F2 | TF binding region |
OR52Y1P | TF binding region |
MMP26 | TF binding region |
OR51N1P | CpG island |
OR52R1 | CpG island |
OR51F1 | CpG island |
OR51F2 | CpG island |
OR52Y1P | CpG island |
MMP26 | CpG island |
ENSG00000176937 | chromatin interactions |
ENSG00000188069 | chromatin interactions |
ENSG00000175520 | chromatin interactions |
ENSG00000132274 | chromatin interactions |
ENSG00000176951 | chromatin interactions |
ENSG00000232381 | chromatin interactions |
ENSG00000176798 | chromatin interactions |
ENSG00000225003 | chromatin interactions |
ENSG00000224300 | chromatin interactions |
ENSG00000236248 | chromatin interactions |
ENSG00000167346 | chromatin interactions |
ENSG00000201980 | chromatin interactions |
ENSG00000132256 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs568879061 | chr11:4782239-4782240 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
2 | rs540904812 | chr11:4782271-4782272 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
3 | rs146300396 | chr11:4782284-4782285 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
4 | rs139645549 | chr11:4782297-4782298 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
5 | rs542832560 | chr11:4782321-4782322 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
6 | rs561061370 | chr11:4782450-4782451 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
7 | rs576022803 | chr11:4782483-4782484 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
8 | rs73393072 | chr11:4782508-4782509 | Inactive region | Chromatin interactive region | 4 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
9 | rs78425414 | chr11:4782535-4782536 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
10 | rs151050531 | chr11:4782597-4782598 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
11 | rs547747938 | chr11:4782614-4782615 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
12 | rs559362373 | chr11:4782652-4782653 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
13 | rs182112067 | chr11:4782656-4782657 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
14 | rs11033743 | chr11:4782660-4782661 | Inactive region | Chromatin interactive region | 4 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
15 | rs370125578 | chr11:4782664-4782665 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
16 | rs371384646 | chr11:4782701-4782702 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
17 | rs575058153 | chr11:4782724-4782725 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
18 | rs140841563 | chr11:4782768-4782769 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
19 | rs149709818 | chr11:4782788-4782789 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
20 | rs373954264 | chr11:4782789-4782790 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
21 | rs147859206 | chr11:4782790-4782791 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
22 | rs76172881 | chr11:4782826-4782827 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
23 | rs538634005 | chr11:4782877-4782878 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
24 | rs554071865 | chr11:4782881-4782882 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
25 | rs371264230 | chr11:4782914-4782915 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
26 | rs184998469 | chr11:4782975-4782976 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
27 | rs536869043 | chr11:4783047-4783048 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
28 | rs77699349 | chr11:4783053-4783054 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
29 | rs576575071 | chr11:4783075-4783076 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
30 | rs141435900 | chr11:4783095-4783096 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
31 | rs146942035 | chr11:4783120-4783121 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
32 | rs576941126 | chr11:4783122-4783123 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
33 | rs540996201 | chr11:4783190-4783191 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
34 | rs112964880 | chr11:4783220-4783221 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
35 | rs559611421 | chr11:4783221-4783222 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
36 | rs529904721 | chr11:4783275-4783276 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
37 | rs563385115 | chr11:4783290-4783291 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
38 | rs137917498 | chr11:4783325-4783326 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
39 | rs549898929 | chr11:4783340-4783341 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
40 | rs571388479 | chr11:4783362-4783363 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
41 | rs189854997 | chr11:4783445-4783446 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
42 | rs7122028 | chr11:4783454-4783455 | Inactive region | Chromatin interactive region | 4 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
43 | rs566373418 | chr11:4783468-4783469 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
44 | rs116463481 | chr11:4783477-4783478 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
45 | rs183211430 | chr11:4783596-4783597 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
46 | rs557760242 | chr11:4783614-4783615 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
47 | rs570187776 | chr11:4783618-4783619 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
48 | rs7125620 | chr11:4783637-4783638 | Inactive region | Chromatin interactive region | 4 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
49 | rs142362328 | chr11:4783648-4783649 | Inactive region | Chromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
50 | rs540360916 | chr11:4783744-4783745 | Inactive region | TF binding regionChromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Neuroblastoma | 18923191 | CNVD |
Breast cancer | 19432969 | CNVD |
Alzheimer''s disease | 17576883 | CNVD |
Long-qt syndrome | 17576883 | CNVD |
Emphysema | 19352772 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Chordoma | 18071362 | CNVD |
Breast cancer | 16608533 | CNVD |
Cancer | 21183584 | CNVD |
Gastric adenocarcinoma | 19115996 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Burkitt''s lymphoma | 19759907 | CNVD |
Breast cancer | 17603634 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Melanoma | 18172304 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Wilms tumour | 21544195 | CNVD |
Parathyroid adenoma | 22454399 | CNVD |
Chordoma | 21602918 | CNVD |
Breast cancer | 21949216 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 19222835 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Beckwith-Wiedemann syndrome | 21518781 | CNVD |
Wilms tumour | 21518781 | CNVD |
Hepatoblastoma | 21518781 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Gastric cancer | 17908304 | CNVD |
Barrett''s syndrome | 19417022 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Autism | 22495311 | CNVD |
Esophageal adenocarcinoma | 18519675 | CNVD |
Ovine squamous-cell carcinoma | 17599052 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Glioma | 17123091 | CNVD |
Lung cancer | 16773561 | CNVD |
Neuroblastoma | 21124317 | CNVD |
Lung adenocarcinoma | 17086460 | CNVD |
Lung cancer | 17086460 | CNVD |
Schizophrenia | 21399695 | CNVD |
Gastric cancer | 16891809 | CNVD |
Cancer | 17160897 | CNVD |
Multiple myeloma | 16616336 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21364760 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Breast cancer | 22522925 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Schizophrenia | 20967226 | CNVD |
Schizophrenia | 23813976 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:4784000-4784800 | Enhancers | GM12878-XiMat | blood |
2 | chr11:4797800-4798200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
3 | chr11:4808000-4808400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
4 | chr11:4815400-4816200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
5 | chr11:4815800-4816000 | Enhancers | Small Intestine | intestine |
6 | chr11:4816200-4820200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
7 | chr11:4816400-4816600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
8 | chr11:4816400-4816800 | Enhancers | Gastric | stomach |
9 | chr11:4816800-4817000 | Weak transcription | Gastric | stomach |
10 | chr11:4817000-4817400 | Enhancers | Gastric | stomach |
11 | chr11:4817200-4817400 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
12 | chr11:4817400-4821200 | Weak transcription | Gastric | stomach |
13 | chr11:4817600-4817800 | Enhancers | Stomach Mucosa | stomach |
14 | chr11:4818000-4818800 | Enhancers | Sigmoid Colon | Sigmoid Colon |
15 | chr11:4818600-4818800 | Enhancers | Stomach Mucosa | stomach |
16 | chr11:4820200-4820400 | Enhancers | Stomach Mucosa | stomach |
17 | chr11:4820200-4821000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
18 | chr11:4821200-4821600 | Enhancers | Gastric | stomach |
19 | chr11:4821600-4825000 | Weak transcription | Gastric | stomach |
20 | chr11:4824000-4826600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
21 | chr11:4825000-4825200 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
22 | chr11:4825000-4825200 | Enhancers | Spleen | Spleen |
23 | chr11:4825000-4825400 | Bivalent/Poised TSS | Brain Substantia Nigra | brain |
24 | chr11:4825000-4825400 | Active TSS | Gastric | stomach |
25 | chr11:4840200-4842000 | Enhancers | NHDF-Ad | bronchial |
26 | chr11:4840400-4842400 | Enhancers | Muscle Satellite Cultured Cells | -- |
27 | chr11:4840600-4842000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
28 | chr11:4840600-4842000 | Enhancers | NHEK | skin |
29 | chr11:4841000-4842000 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
30 | chr11:4841000-4842000 | Enhancers | HMEC | breast |
31 | chr11:4841000-4842200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
32 | chr11:4842600-4843000 | Active TSS | Brain Substantia Nigra | brain |
33 | chr11:4843000-4843200 | Bivalent/Poised TSS | Brain Substantia Nigra | brain |