Variant report

Variant esv1810004
Chromosome Location chr1:62436942-62451029
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:133 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62385000-62494200 Weak transcription Aorta Aorta
2 chr1:62409200-62456000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:62409200-62456800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr1:62409200-62457000 Weak transcription Fetal Intestine Large intestine
5 chr1:62409200-62518600 Weak transcription Pancreas Pancrea
6 chr1:62409400-62458400 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:62418200-62446400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:62418400-62441400 Weak transcription Fetal Kidney kidney
9 chr1:62419600-62445800 Weak transcription Left Ventricle heart
10 chr1:62424200-62494200 Weak transcription Esophagus oesophagus
11 chr1:62424800-62438200 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:62425000-62441400 Weak transcription Stomach Mucosa stomach
13 chr1:62430600-62442200 Weak transcription Fetal Intestine Small intestine
14 chr1:62432200-62439000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:62433400-62439200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:62433600-62456800 Weak transcription NHEK skin
17 chr1:62433800-62438600 Weak transcription HMEC breast
18 chr1:62433800-62444800 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr1:62433800-62445400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:62434000-62457000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:62434800-62444800 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr1:62438200-62438600 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr1:62438400-62439000 Enhancers Liver Liver
24 chr1:62438400-62439200 Enhancers Skeletal Muscle Male skeletal muscle
25 chr1:62438600-62439600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr1:62438600-62439600 Enhancers Placenta Amnion Placenta Amnion
27 chr1:62438600-62445000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr1:62438800-62439000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr1:62439000-62439200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr1:62439000-62439400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:62439000-62439800 Enhancers Psoas Muscle Psoas
32 chr1:62439000-62439800 Active TSS Skeletal Muscle Female skeletal muscle
33 chr1:62439000-62440000 Flanking Active TSS Liver Liver
34 chr1:62439000-62440000 Enhancers Pancreatic Islets Pancreatic Islet
35 chr1:62439200-62439600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr1:62439200-62440200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:62439200-62441200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr1:62439400-62441200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:62439600-62439800 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr1:62439600-62439800 Enhancers Skeletal Muscle Male skeletal muscle
41 chr1:62439800-62440000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
42 chr1:62439800-62440400 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr1:62439800-62440800 Weak transcription Psoas Muscle Psoas
44 chr1:62439800-62440800 Enhancers HepG2 liver
45 chr1:62439800-62441000 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:62440000-62440800 Enhancers Liver Liver
47 chr1:62440000-62441200 Enhancers Skeletal Muscle Female skeletal muscle
48 chr1:62440200-62440400 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:62440200-62440800 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr1:62440400-62441600 Strong transcription Breast Myoepithelial Primary Cells Breast

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