Variant report
Variant | esv1810487 |
---|---|
Chromosome Location | chr22:20390863-20613311 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1451)
- CpG islands (count:1039)
- Chromatin interactive region (count:0)
- LncRNA region (count:4)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BATF | chr22:20445015-20445218 | GM12878 | blood: | n/a | n/a |
2 | BATF | chr22:20427669-20427862 | GM12878 | blood: | n/a | n/a |
3 | BCL11A | chr22:20460690-20460996 | GM12878 | blood: | n/a | n/a |
4 | BCL11A | chr22:20424439-20424711 | GM12878 | blood: | n/a | n/a |
5 | BHLHE40 | chr22:20420653-20421045 | HepG2 | liver: | n/a | chr22:20420721-20420737 |
6 | BHLHE40 | chr22:20436958-20437296 | HepG2 | liver: | n/a | n/a |
7 | BHLHE40 | chr22:20428314-20428573 | HepG2 | liver: | n/a | n/a |
8 | BHLHE40 | chr22:20460604-20460954 | HepG2 | liver: | n/a | n/a |
9 | BHLHE40 | chr22:20445081-20445367 | HepG2 | liver: | n/a | n/a |
10 | CBX3 | chr22:20454740-20456344 | K562 | blood: | n/a | n/a |
11 | CBX3 | chr22:20441631-20442615 | K562 | blood: | n/a | n/a |
12 | CBX3 | chr22:20408901-20410101 | K562 | blood: | n/a | n/a |
13 | CBX3 | chr22:20420272-20421095 | K562 | blood: | n/a | n/a |
14 | CBX3 | chr22:20444910-20445645 | K562 | blood: | n/a | n/a |
15 | CBX3 | chr22:20423295-20424707 | K562 | blood: | n/a | n/a |
16 | CBX3 | chr22:20450575-20451117 | K562 | blood: | n/a | n/a |
17 | CBX3 | chr22:20424749-20427337 | K562 | blood: | n/a | n/a |
18 | CBX3 | chr22:20420629-20421065 | K562 | blood: | n/a | n/a |
19 | CBX3 | chr22:20460679-20461023 | K562 | blood: | n/a | n/a |
20 | CBX3 | chr22:20459968-20461115 | K562 | blood: | n/a | n/a |
21 | CEBPB | chr22:20445369-20445569 | K562 | blood: | n/a | n/a |
22 | CEBPB | chr22:20447394-20447719 | K562 | blood: | n/a | n/a |
23 | CEBPB | chr22:20428597-20429008 | K562 | blood: | n/a | n/a |
24 | CEBPB | chr22:20418225-20418487 | K562 | blood: | n/a | n/a |
25 | CEBPB | chr22:20445011-20445575 | K562 | blood: | n/a | n/a |
26 | CEBPB | chr22:20420603-20421116 | K562 | blood: | n/a | chr22:20420901-20420912 |
27 | CEBPB | chr22:20407773-20408094 | K562 | blood: | n/a | n/a |
28 | CEBPB | chr22:20437259-20437596 | K562 | blood: | n/a | n/a |
29 | CEBPB | chr22:20427068-20427414 | K562 | blood: | n/a | n/a |
30 | CEBPB | chr22:20418866-20419026 | HepG2 | liver: | n/a | n/a |
31 | CEBPB | chr22:20417912-20418536 | K562 | blood: | n/a | n/a |
32 | CEBPB | chr22:20462825-20463220 | K562 | blood: | n/a | n/a |
33 | CEBPB | chr22:20441660-20442283 | K562 | blood: | n/a | n/a |
34 | CEBPB | chr22:20437060-20437626 | K562 | blood: | n/a | n/a |
35 | CEBPB | chr22:20428730-20428899 | K562 | blood: | n/a | n/a |
36 | CEBPD | chr22:20441629-20442366 | K562 | blood: | n/a | n/a |
37 | CEBPD | chr22:20427674-20428046 | K562 | blood: | n/a | n/a |
38 | CEBPD | chr22:20407743-20408227 | K562 | blood: | n/a | n/a |
39 | CEBPD | chr22:20418246-20418607 | K562 | blood: | n/a | n/a |
40 | CEBPD | chr22:20426520-20427025 | K562 | blood: | n/a | n/a |
41 | CEBPD | chr22:20444985-20445622 | K562 | blood: | n/a | n/a |
42 | CEBPD | chr22:20427039-20427449 | K562 | blood: | n/a | n/a |
43 | CEBPD | chr22:20420620-20421076 | K562 | blood: | n/a | n/a |
44 | CEBPD | chr22:20437199-20437678 | K562 | blood: | n/a | n/a |
45 | CTCF | chr22:20445064-20445319 | Lung_OC | lung: | n/a | chr22:20445160-20445181 chr22:20445171-20445180 chr22:20445167-20445180 chr22:20445165-20445183 chr22:20445166-20445182 |
46 | CTCF | chr22:20424589-20424592 | Pancreas_OC | pancreas: | n/a | n/a |
47 | CTCF | chr22:20442080-20442230 | HRE | kidney: | n/a | chr22:20442083-20442096 |
48 | CTCF | chr22:20445020-20445170 | GM12878 | blood: | n/a | n/a |
49 | CTCF | chr22:20441745-20442295 | K562 | blood: | n/a | chr22:20441967-20441980 chr22:20442083-20442096 chr22:20442019-20442037 |
50 | CTCF | chr22:20450780-20451044 | A549 | lung: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:20400015-20400065 | AoSMC | blood vessel: | n/a |
2 | chr22:20456706-20456756 | HRPEpiC | eye: | n/a |
3 | chr22:20400015-20400065 | AoSMC | blood vessel: | n/a |
4 | chr22:20456706-20456756 | HRPEpiC | eye: | n/a |
5 | chr22:20432168-20432218 | K562 | blood: | n/a |
6 | chr22:20428109-20428159 | PrEC | prostate: | n/a |
7 | chr22:20504411-20504461 | HRCEpiC | kidney: | n/a |
8 | chr22:20484804-20484854 | MCF10A-Er-Src | breast: | n/a |
9 | chr22:20399974-20400024 | AG04449 | skin: | fetal |
10 | chr22:20423500-20423550 | T-47D | breast: | n/a |
11 | chr22:20400015-20400065 | H1-hESC | embryonic stem cell: | embryo |
12 | chr22:20399601-20399651 | ProgFib | skin: | n/a |
13 | chr22:20399601-20399651 | HCT-116 | colon: | n/a |
14 | chr22:20399974-20400024 | GM12878 | blood: | n/a |
15 | chr22:20483668-20483718 | Hepatocyte | liver: | n/a |
16 | chr22:20502597-20502647 | AG09309 | skin: | n/a |
17 | chr22:20460068-20460118 | HCPEpiC | choroid plexus: | n/a |
18 | chr22:20460068-20460118 | A549 | lung: | n/a |
19 | chr22:20485872-20485922 | SK-N-SH_RA | brain: | n/a |
20 | chr22:20483668-20483718 | HEEpiC | esophagus: | n/a |
21 | chr22:20462514-20462564 | AG04449 | skin: | fetal |
22 | chr22:20399601-20399651 | GM06990 | blood: | n/a |
23 | chr22:20460068-20460118 | HRCEpiC | kidney: | n/a |
24 | chr22:20483668-20483718 | Hela-S3 | cervix: | n/a |
25 | chr22:20502597-20502647 | AG04450 | lung: | fetal |
26 | chr22:20457884-20457934 | Caco-2 | colon: | n/a |
27 | chr22:20432168-20432218 | Hepatocyte | liver: | n/a |
28 | chr22:20504411-20504461 | HepG2 | liver: | n/a |
29 | chr22:20483668-20483718 | Jurkat | blood: | n/a |
30 | chr22:20481341-20481391 | AoSMC | blood vessel: | n/a |
31 | chr22:20399974-20400024 | NHBE | bronchial: | n/a |
32 | chr22:20428109-20428159 | HIPEpiC | eye: | n/a |
33 | chr22:20457884-20457934 | HEEpiC | esophagus: | n/a |
34 | chr22:20400015-20400065 | RPTEC | kidney: | n/a |
35 | chr22:20400015-20400065 | Hepatocyte | liver: | n/a |
36 | chr22:20400015-20400065 | NHDF-neo | bronchial: | n/a |
37 | chr22:20428109-20428159 | PANC-1 | pancreas: | n/a |
38 | chr22:20423500-20423550 | SK-N-SH_RA | brain: | n/a |
39 | chr22:20456706-20456756 | NHDF-neo | bronchial: | n/a |
40 | chr22:20483668-20483718 | SK-N-SH_RA | brain: | n/a |
41 | chr22:20484804-20484854 | AG09319 | gingival: | n/a |
42 | chr22:20423500-20423550 | NT2-D1 | testis: | n/a |
43 | chr22:20462514-20462564 | HepG2 | liver: | n/a |
44 | chr22:20456706-20456756 | HMEC | breast: | n/a |
45 | chr22:20504411-20504461 | LNCaP | prostate: | n/a |
46 | chr22:20460068-20460118 | GM12891 | blood: | n/a |
47 | chr22:20432168-20432218 | GM12878 | blood: | n/a |
48 | chr22:20399974-20400024 | SAEC | small airway: | n/a |
49 | chr22:20428109-20428159 | ECC-1 | luminal epithelium: | n/a |
50 | chr22:20460068-20460118 | HPAEpiC | pulmonary alveolar: | n/a |
No data |
(count:4 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-RIMBP3-1 | chr22:20455669-20455969 | NONHSAT083514 |
2 | lnc-AC007663.1-5 | chr22:20420432-20420591 | XLOC_014158 |
3 | lnc-AC007663.1-5 | chr22:20401139-20401184 | XLOC_014158 |
4 | lnc-AC007663.1-5 | chr22:20404157-20404240 | XLOC_014158 |
No data |
No data |
Variant related genes | Relation type |
---|---|
CA15P2 | TF binding region |
ENSG00000252024 | TF binding region |
ENSG00000236984 | TF binding region |
RIMBP3 | TF binding region |
PPP1R26P2 | TF binding region |
ENSG00000271796 | TF binding region |
ENSG00000216522 | TF binding region |
PI4KAP1 | TF binding region |
ENSG00000252571 | TF binding region |
RN7SKP131 | TF binding region |
CA15P2 | CpG island |
ENSG00000252024 | CpG island |
ENSG00000236984 | CpG island |
RIMBP3 | CpG island |
PPP1R26P2 | CpG island |
ENSG00000271796 | CpG island |
ENSG00000216522 | CpG island |
PI4KAP1 | CpG island |
ENSG00000252571 | CpG island |
RN7SKP131 | CpG island |
E2F1 | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs5753740 | chr22:20390863-20390864 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs9609563 | chr22:20390904-20390905 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs536778745 | chr22:20390984-20390985 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs461860 | chr22:20391062-20391063 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs186020229 | chr22:20391127-20391128 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs2450090 | chr22:20391136-20391137 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs566800690 | chr22:20391184-20391185 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs2845528 | chr22:20391378-20391379 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs534872361 | chr22:20391761-20391762 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs2629356 | chr22:20391788-20391789 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs368447327 | chr22:20391847-20391848 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs536828047 | chr22:20391872-20391873 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs190089342 | chr22:20391891-20391892 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs2629357 | chr22:20391937-20391938 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs542401153 | chr22:20391952-20391953 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs1967050 | chr22:20392045-20392046 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs2629359 | chr22:20392079-20392080 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs559253955 | chr22:20392102-20392103 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs62218653 | chr22:20392663-20392664 | Weak transcription Strong transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs572757476 | chr22:20392668-20392669 | Weak transcription Strong transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs545650987 | chr22:20392984-20392985 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs543992948 | chr22:20393004-20393005 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs112162743 | chr22:20393020-20393021 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs565601761 | chr22:20393035-20393036 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs532970261 | chr22:20393138-20393139 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs375588630 | chr22:20393204-20393205 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs551183393 | chr22:20393215-20393216 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs561507499 | chr22:20393238-20393239 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs368112394 | chr22:20393275-20393276 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs372014317 | chr22:20393279-20393280 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs566818644 | chr22:20393281-20393282 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs375966002 | chr22:20393297-20393298 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs552567832 | chr22:20393335-20393336 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs571192299 | chr22:20393352-20393353 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs536988570 | chr22:20393396-20393397 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs556731641 | chr22:20393413-20393414 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs369000751 | chr22:20393475-20393476 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs536302329 | chr22:20393566-20393567 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs62218654 | chr22:20393585-20393586 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs572770390 | chr22:20393616-20393617 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs544659900 | chr22:20393654-20393655 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs558622269 | chr22:20393701-20393702 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs2845534 | chr22:20393783-20393784 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs575999723 | chr22:20393787-20393788 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs113877305 | chr22:20393818-20393819 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs544968151 | chr22:20393881-20393882 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs561421497 | chr22:20393919-20393920 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs530242241 | chr22:20393923-20393924 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs3016139 | chr22:20394006-20394007 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs553295442 | chr22:20394029-20394030 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22102821 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Gastric cancer | 22591714 | CNVD |
Autism | 22958593 | CNVD |
Digeorge syndrome | 16199537 | CNVD |
Schizophrenia | 22958593 | CNVD |
Schizophrenia | 21285140 | CNVD |
Schizophrenia | 22241247 | CNVD |
Autism | 22241247 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 18628472 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Schizophrenia | 21399695 | CNVD |
22q11.21 microdeletion syndrome | 19193630 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Esophageal cancer | 21851588 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
cardiac septal defect | 19239688 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Ependymoma | 20639864 | CNVD |
Lung adenocarcinoma | 21935476 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Cancer | 20164920 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:20378400-20393400 | Weak transcription | Fetal Intestine Small | intestine |
2 | chr22:20378600-20395600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
3 | chr22:20378600-20398400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
4 | chr22:20378600-20400600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
5 | chr22:20379000-20391600 | Weak transcription | Fetal Thymus | thymus |
6 | chr22:20379000-20393000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
7 | chr22:20379000-20398000 | Weak transcription | Dnd41 | blood |
8 | chr22:20379000-20399800 | Weak transcription | Fetal Intestine Large | intestine |
9 | chr22:20379000-20401200 | Weak transcription | Adipose Nuclei | Adipose |
10 | chr22:20379000-20401400 | Weak transcription | K562 | blood |
11 | chr22:20379000-20404000 | Weak transcription | Fetal Muscle Leg | muscle |
12 | chr22:20379000-20404200 | Weak transcription | Stomach Smooth Muscle | stomach |
13 | chr22:20379800-20395600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
14 | chr22:20380200-20402400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
15 | chr22:20381600-20402400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
16 | chr22:20383000-20399800 | Weak transcription | HepG2 | liver |
17 | chr22:20385000-20395400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
18 | chr22:20385400-20391600 | Weak transcription | Lung | lung |
19 | chr22:20386000-20401000 | Weak transcription | Fetal Stomach | stomach |
20 | chr22:20390000-20395200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
21 | chr22:20390200-20399800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
22 | chr22:20390200-20409000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
23 | chr22:20390800-20392400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
24 | chr22:20390800-20402600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
25 | chr22:20392400-20392800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
26 | chr22:20392800-20402200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
27 | chr22:20393400-20394200 | Strong transcription | Fetal Intestine Small | intestine |
28 | chr22:20394200-20399600 | Weak transcription | Fetal Intestine Small | intestine |
29 | chr22:20398400-20398600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
30 | chr22:20399600-20402000 | Strong transcription | Fetal Intestine Small | intestine |
31 | chr22:20399800-20400000 | Enhancers | Fetal Intestine Large | intestine |
32 | chr22:20399800-20400200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
33 | chr22:20399800-20401000 | Enhancers | HepG2 | liver |
34 | chr22:20400000-20400200 | Weak transcription | Fetal Intestine Large | intestine |
35 | chr22:20400200-20406400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
36 | chr22:20401000-20401800 | Strong transcription | Fetal Stomach | stomach |
37 | chr22:20401400-20401600 | Enhancers | K562 | blood |
38 | chr22:20401800-20403400 | Weak transcription | Fetal Stomach | stomach |
39 | chr22:20402000-20404200 | Weak transcription | Fetal Intestine Small | intestine |
40 | chr22:20402200-20402800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
41 | chr22:20402400-20402800 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
42 | chr22:20402400-20402800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
43 | chr22:20402800-20406200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
44 | chr22:20404000-20404200 | Enhancers | Fetal Muscle Leg | muscle |
45 | chr22:20404200-20404400 | Enhancers | Stomach Smooth Muscle | stomach |
46 | chr22:20406200-20406400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
47 | chr22:20406400-20406600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
48 | chr22:20409200-20409400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
49 | chr22:20420400-20420800 | Enhancers | Monocytes-CD14+_RO01746 | blood |
50 | chr22:20420400-20421200 | Enhancers | Primary hematopoietic stem cells short term culture | blood |