Variant report

Variant esv1812605
Chromosome Location chr20:1544966-1560140
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:1532800-1545400 Weak transcription Spleen Spleen
2 chr20:1537000-1551600 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr20:1541800-1545200 Weak transcription Primary T cells from cord blood blood
4 chr20:1543000-1545000 Genic enhancers Primary neutrophils fromperipheralblood blood
5 chr20:1543200-1550400 Weak transcription Thymus Thymus
6 chr20:1543600-1548600 Genic enhancers Primary monocytes fromperipheralblood blood
7 chr20:1543800-1568000 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr20:1544000-1545000 Genic enhancers Monocytes-CD14+_RO01746 blood
9 chr20:1544600-1569000 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr20:1544800-1548200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr20:1545000-1545400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
12 chr20:1545000-1548000 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr20:1545200-1547400 Strong transcription Primary T cells from cord blood blood
14 chr20:1545400-1546200 Genic enhancers Monocytes-CD14+_RO01746 blood
15 chr20:1545400-1546600 Strong transcription Spleen Spleen
16 chr20:1545600-1545800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr20:1545800-1546800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr20:1545800-1549400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr20:1546000-1547000 ZNF genes & repeats Lung lung
20 chr20:1546200-1547800 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr20:1546600-1551200 Enhancers Hela-S3 cervix
22 chr20:1546600-1551400 Weak transcription Spleen Spleen
23 chr20:1546800-1550800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr20:1546800-1551000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr20:1547000-1547800 Enhancers NHEK skin
26 chr20:1547000-1550800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr20:1547000-1551000 Enhancers HMEC breast
28 chr20:1547200-1549000 Enhancers NH-A brain
29 chr20:1547200-1549400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr20:1547200-1551000 Enhancers HUVEC blood vessel
31 chr20:1547400-1548000 Enhancers A549 lung
32 chr20:1547400-1548800 Weak transcription Primary T cells from cord blood blood
33 chr20:1547400-1549000 Enhancers Osteobl bone
34 chr20:1547800-1548000 Genic enhancers Monocytes-CD14+_RO01746 blood
35 chr20:1547800-1548200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr20:1547800-1548600 Enhancers HUES64 Cell Line embryonic stem cell
37 chr20:1547800-1548800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr20:1547800-1548800 Flanking Active TSS NHEK skin
39 chr20:1547800-1550200 Enhancers NHDF-Ad bronchial
40 chr20:1548000-1548200 Active TSS A549 lung
41 chr20:1548000-1548400 Enhancers HUES6 Cell Line embryonic stem cell
42 chr20:1548000-1548400 Genic enhancers Primary neutrophils fromperipheralblood blood
43 chr20:1548000-1548400 Enhancers Esophagus oesophagus
44 chr20:1548000-1548400 Enhancers NHLF lung
45 chr20:1548000-1548800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr20:1548000-1549000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr20:1548000-1549000 Enhancers Muscle Satellite Cultured Cells --
48 chr20:1548000-1549000 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
49 chr20:1548200-1548600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr20:1548200-1548600 Flanking Active TSS A549 lung

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