No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs538450087 |
chr20:1544995-1544996 |
Genic enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs184925039 |
chr20:1545028-1545029 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs373462740 |
chr20:1545076-1545077 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs146013755 |
chr20:1545080-1545081 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs139920459 |
chr20:1545089-1545090 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs572798438 |
chr20:1545117-1545118 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs188981426 |
chr20:1545133-1545134 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs544907957 |
chr20:1545166-1545167 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs149708397 |
chr20:1545186-1545187 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs573689204 |
chr20:1545208-1545209 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs544374358 |
chr20:1545293-1545294 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs375137247 |
chr20:1545387-1545388 |
Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs181069766 |
chr20:1545406-1545407 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs577507288 |
chr20:1545409-1545410 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs185518072 |
chr20:1545462-1545463 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs2253693 |
chr20:1545468-1545469 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
17 |
rs45512895 |
chr20:1545529-1545530 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
18 |
rs549177731 |
chr20:1545541-1545542 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs2253698 |
chr20:1545617-1545618 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
20 |
rs6105340 |
chr20:1545635-1545636 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs550385271 |
chr20:1545669-1545670 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs200979171 |
chr20:1545690-1545691 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs571877913 |
chr20:1545691-1545692 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs536410483 |
chr20:1545718-1545719 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs189597232 |
chr20:1545727-1545728 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs531589523 |
chr20:1545745-1545746 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs372470630 |
chr20:1545794-1545795 |
ZNF genes & repeats Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs16995228 |
chr20:1545857-1545858 |
Enhancers Weak transcription Genic enhancers Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs566308622 |
chr20:1545941-1545942 |
Enhancers Weak transcription Genic enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs533766481 |
chr20:1545980-1545981 |
Enhancers Weak transcription Genic enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs145520796 |
chr20:1545981-1545982 |
Enhancers Weak transcription Genic enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs371415442 |
chr20:1546012-1546013 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs114721859 |
chr20:1546020-1546021 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs373144814 |
chr20:1546030-1546031 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs570931302 |
chr20:1546035-1546036 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs577419882 |
chr20:1546086-1546087 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs544878020 |
chr20:1546093-1546094 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs536615314 |
chr20:1546135-1546136 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs572287257 |
chr20:1546148-1546149 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs2253814 |
chr20:1546175-1546176 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs2253815 |
chr20:1546207-1546208 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs74321032 |
chr20:1546229-1546230 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs536542704 |
chr20:1546233-1546234 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs181521523 |
chr20:1546248-1546249 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs148842400 |
chr20:1546256-1546257 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs552931485 |
chr20:1546263-1546264 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs142523875 |
chr20:1546274-1546275 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs11907473 |
chr20:1546350-1546351 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
49 |
rs147557710 |
chr20:1546352-1546353 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs566340787 |
chr20:1546353-1546354 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|