Variant report
Variant | esv1813802 |
---|---|
Chromosome Location | chr22:21541962-21652975 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2232)
- CpG islands (count:366)
- Chromatin interactive region (count:0)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21592118-21592318 | HepG2 | liver: | n/a | n/a |
2 | BATF | chr22:21595541-21595907 | GM12878 | blood: | n/a | n/a |
3 | BATF | chr22:21649952-21650430 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr22:21647063-21647283 | GM12878 | blood: | n/a | n/a |
5 | BATF | chr22:21630913-21631158 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr22:21604490-21604702 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:21582473-21582683 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:21640199-21640520 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:21598960-21599438 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:21561792-21562184 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:21643759-21643961 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:21597069-21597517 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr22:21589609-21589832 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr22:21555841-21556178 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr22:21643643-21643852 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr22:21649545-21649756 | GM12878 | blood: | n/a | chr22:21649662-21649673 |
17 | BATF | chr22:21642702-21642952 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr22:21643995-21645011 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr22:21644369-21644724 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr22:21629855-21630214 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr22:21551290-21551548 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr22:21544870-21545207 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr22:21598470-21598721 | GM12878 | blood: | n/a | chr22:21598499-21598512 |
24 | BATF | chr22:21595314-21596320 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr22:21622260-21622514 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr22:21598826-21599972 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr22:21596510-21596681 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr22:21629925-21630195 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr22:21633690-21634128 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr22:21612702-21613053 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr22:21545572-21545926 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr22:21622187-21622362 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr22:21592466-21592660 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr22:21638069-21638308 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr22:21629922-21630182 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr22:21647854-21648181 | GM12878 | blood: | n/a | chr22:21647942-21647950 |
37 | BCL11A | chr22:21620530-21620718 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr22:21598457-21598767 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr22:21597055-21597628 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr22:21595087-21596596 | GM12878 | blood: | n/a | chr22:21595372-21595380 chr22:21595811-21595820 |
41 | BCL11A | chr22:21632912-21633155 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr22:21557216-21557815 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr22:21643710-21643967 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr22:21545709-21545903 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr22:21598929-21599568 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr22:21599067-21599394 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr22:21561919-21562177 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr22:21644056-21645082 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr22:21590153-21590357 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr22:21595561-21595820 | GM12878 | blood: | n/a | chr22:21595811-21595820 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21621725-21621775 | Hela-S3 | cervix: | n/a |
2 | chr22:21618908-21618958 | HRCEpiC | kidney: | n/a |
3 | chr22:21618908-21618958 | ovcar-3 | ovarian: | n/a |
4 | chr22:21618908-21618958 | BE2_C | brain: | n/a |
5 | chr22:21636474-21636524 | NHDF-neo | bronchial: | n/a |
6 | chr22:21639231-21639281 | AoSMC | blood vessel: | n/a |
7 | chr22:21621725-21621775 | SKMC | muscle: | n/a |
8 | chr22:21636474-21636524 | U87 | brain: | n/a |
9 | chr22:21567227-21567277 | HCF | heart: | n/a |
10 | chr22:21639231-21639281 | SK-N-SH | brain: | n/a |
11 | chr22:21639231-21639281 | ProgFib | skin: | n/a |
12 | chr22:21639231-21639281 | BE2_C | brain: | n/a |
13 | chr22:21567227-21567277 | HRE | kidney: | n/a |
14 | chr22:21567227-21567277 | HMEC | breast: | n/a |
15 | chr22:21567227-21567277 | AoSMC | blood vessel: | n/a |
16 | chr22:21567227-21567277 | PFSK-1 | brain: | n/a |
17 | chr22:21639231-21639281 | HepG2 | liver: | n/a |
18 | chr22:21621725-21621775 | HMEC | breast: | n/a |
19 | chr22:21639231-21639281 | GM12891 | blood: | n/a |
20 | chr22:21618908-21618958 | HIPEpiC | eye: | n/a |
21 | chr22:21636512-21636562 | NHBE | bronchial: | n/a |
22 | chr22:21618908-21618958 | SKMC | muscle: | n/a |
23 | chr22:21636474-21636524 | SAEC | small airway: | n/a |
24 | chr22:21567227-21567277 | BE2_C | brain: | n/a |
25 | chr22:21567227-21567277 | HRPEpiC | eye: | n/a |
26 | chr22:21636474-21636524 | HAEpiC | amniotic membrane: | n/a |
27 | chr22:21618908-21618958 | HEK293 | kidney: | embryo |
28 | chr22:21636474-21636524 | BJ | skin: | n/a |
29 | chr22:21567227-21567277 | GM06990 | blood: | n/a |
30 | chr22:21621725-21621775 | AG09309 | skin: | n/a |
31 | chr22:21567227-21567277 | HPAEpiC | pulmonary alveolar: | n/a |
32 | chr22:21639231-21639281 | LNCaP | prostate: | n/a |
33 | chr22:21618908-21618958 | HCF | heart: | n/a |
34 | chr22:21618908-21618958 | AG04449 | skin: | fetal |
35 | chr22:21618908-21618958 | MCF-7 | breast: | n/a |
36 | chr22:21618908-21618958 | CMK | blood: | n/a |
37 | chr22:21618908-21618958 | A549 | lung: | n/a |
38 | chr22:21621725-21621775 | LNCaP | prostate: | n/a |
39 | chr22:21567227-21567277 | SAEC | small airway: | n/a |
40 | chr22:21621725-21621775 | GM12891 | blood: | n/a |
41 | chr22:21567227-21567277 | AG10803 | skin: | n/a |
42 | chr22:21621725-21621775 | HRE | kidney: | n/a |
43 | chr22:21567227-21567277 | NH-A | brain: | n/a |
44 | chr22:21618908-21618958 | NHDF-neo | bronchial: | n/a |
45 | chr22:21639231-21639281 | AG09309 | skin: | n/a |
46 | chr22:21639231-21639281 | AG04450 | lung: | fetal |
47 | chr22:21567227-21567277 | HIPEpiC | eye: | n/a |
48 | chr22:21636474-21636524 | HEK293 | kidney: | embryo |
49 | chr22:21618908-21618958 | HepG2 | liver: | n/a |
50 | chr22:21636474-21636524 | HCM | heart: | n/a |
No data |
(count:1 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-AP000552.1-2 | chr22:21546011-21546438 | ENSG00000215498.4 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000226885 | TF binding region |
POM121L8P | TF binding region |
BCRP6 | TF binding region |
GGT2 | TF binding region |
ENSG00000226885 | CpG island |
POM121L8P | CpG island |
BCRP6 | CpG island |
GGT2 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs376023262 | chr22:21548847-21548848 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs539026951 | chr22:21548855-21548856 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs556144556 | chr22:21548896-21548897 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs9625840 | chr22:21548911-21548912 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs2329677 | chr22:21549008-21549009 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs4051747 | chr22:21549028-21549029 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs576130 | chr22:21549055-21549056 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs62240940 | chr22:21549077-21549078 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs555594085 | chr22:21549121-21549122 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs62240941 | chr22:21549131-21549132 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs373484895 | chr22:21557230-21557231 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs377540303 | chr22:21557241-21557242 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs544114783 | chr22:21557266-21557267 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs201558515 | chr22:21557268-21557269 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs529637628 | chr22:21557278-21557279 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs75885650 | chr22:21557287-21557288 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs2543392 | chr22:21557288-21557289 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs79638301 | chr22:21557299-21557300 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs374393972 | chr22:21557300-21557301 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs112559344 | chr22:21557316-21557317 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs141850698 | chr22:21557348-21557349 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs200775095 | chr22:21557349-21557350 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs528170026 | chr22:21557383-21557384 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs112975494 | chr22:21557448-21557449 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs368713332 | chr22:21557470-21557471 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs372932442 | chr22:21557508-21557509 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs201898062 | chr22:21557626-21557627 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs370476211 | chr22:21557641-21557642 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs375052377 | chr22:21557652-21557653 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs200749114 | chr22:21557671-21557672 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs369044307 | chr22:21557676-21557677 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs551482741 | chr22:21557732-21557733 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs571338070 | chr22:21557748-21557749 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs368432962 | chr22:21557750-21557751 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs371302796 | chr22:21557758-21557759 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs537214413 | chr22:21557787-21557788 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs200170290 | chr22:21558100-21558101 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs201116619 | chr22:21558105-21558106 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs202186364 | chr22:21558160-21558161 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs376573313 | chr22:21558242-21558243 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs200230917 | chr22:21558428-21558429 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs62240953 | chr22:21558437-21558438 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs567175093 | chr22:21558448-21558449 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs536148148 | chr22:21558461-21558462 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs62240954 | chr22:21558486-21558487 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs562821601 | chr22:21558489-21558490 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs62240955 | chr22:21558498-21558499 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs199937638 | chr22:21558524-21558525 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs375849458 | chr22:21558557-21558558 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs369855411 | chr22:21558575-21558576 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Schizophrenia | 20967226 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Breast cancer | 22522925 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21548800-21549200 | Enhancers | HepG2 | liver |
2 | chr22:21557200-21557400 | Enhancers | Fetal Muscle Trunk | muscle |
3 | chr22:21557400-21558400 | Weak transcription | Fetal Muscle Trunk | muscle |
4 | chr22:21558400-21558600 | Enhancers | Fetal Muscle Trunk | muscle |
5 | chr22:21558600-21559000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
6 | chr22:21558600-21559000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
7 | chr22:21558600-21559000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
8 | chr22:21558600-21559000 | Enhancers | Fetal Muscle Leg | muscle |
9 | chr22:21559000-21560200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
10 | chr22:21559000-21560200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
11 | chr22:21560200-21560400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
12 | chr22:21560400-21560600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
13 | chr22:21566000-21569400 | Weak transcription | Right Atrium | heart |
14 | chr22:21569800-21590800 | Weak transcription | Gastric | stomach |
15 | chr22:21570200-21570800 | Enhancers | HMEC | breast |
16 | chr22:21570400-21570600 | Bivalent Enhancer | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
17 | chr22:21570400-21570800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
18 | chr22:21570400-21570800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
19 | chr22:21576000-21576200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
20 | chr22:21576000-21576200 | Enhancers | Spleen | Spleen |
21 | chr22:21590600-21590800 | Enhancers | Stomach Mucosa | stomach |
22 | chr22:21590600-21591200 | Enhancers | Pancreas | Pancrea |
23 | chr22:21590800-21591000 | Enhancers | Gastric | stomach |
24 | chr22:21590800-21591800 | Weak transcription | Stomach Mucosa | stomach |
25 | chr22:21591000-21591800 | Weak transcription | Gastric | stomach |
26 | chr22:21591200-21591600 | Weak transcription | Pancreas | Pancrea |
27 | chr22:21591600-21592800 | Enhancers | Pancreas | Pancrea |
28 | chr22:21591800-21592000 | Enhancers | Duodenum Mucosa | Duodenum |
29 | chr22:21591800-21592200 | Enhancers | Fetal Intestine Large | intestine |
30 | chr22:21591800-21592200 | Enhancers | Fetal Intestine Small | intestine |
31 | chr22:21591800-21592200 | Enhancers | Gastric | stomach |
32 | chr22:21591800-21592200 | Enhancers | Stomach Mucosa | stomach |
33 | chr22:21591800-21592400 | Enhancers | HepG2 | liver |
34 | chr22:21592000-21592200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
35 | chr22:21592000-21592200 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
36 | chr22:21592200-21592400 | Enhancers | Duodenum Mucosa | Duodenum |
37 | chr22:21592400-21592800 | Active TSS | Duodenum Mucosa | Duodenum |
38 | chr22:21598600-21599000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
39 | chr22:21604600-21605000 | Bivalent Enhancer | HepG2 | liver |
40 | chr22:21607400-21608600 | Enhancers | HepG2 | liver |
41 | chr22:21607800-21608200 | Enhancers | Fetal Intestine Small | intestine |
42 | chr22:21607800-21608600 | Enhancers | Fetal Intestine Large | intestine |
43 | chr22:21608400-21608600 | Enhancers | HSMMtube | muscle |
44 | chr22:21608600-21609800 | Weak transcription | Fetal Intestine Large | intestine |
45 | chr22:21608600-21609800 | Weak transcription | HepG2 | liver |
46 | chr22:21608600-21610400 | Weak transcription | HSMMtube | muscle |
47 | chr22:21609800-21610200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
48 | chr22:21609800-21610600 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
49 | chr22:21609800-21610600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
50 | chr22:21609800-21610600 | Enhancers | Hela-S3 | cervix |